vOTU vOTU-136890

vOTU: vOTU-136890

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-136890
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00236 → vGENUS-00162 → vOTU-136890
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0171779
Biosample ID	SAMN09781741
Genome length (bp)	18,195 bps
CheckV completeness	55.35% (Medium-quality)
CDS count	36
CDS density	95.20%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	31	Host agreement	80.65
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella	Total connections	12	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0171779_1	phrog_27197	129.1	1.4013e-44	N/A	unknown function
eggNOG-mapper	UHGV-0171779_1	394503.Ccel_3068	51.2	0.00000432	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0171779_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0171779_3	phrog_659	197.5	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171779_3	UniRef90_UPI001E5A6693	409.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171779_3	1507.HMPREF0262_00431	231.0	0	N/A	N/A
Pfam	UHGV-0171779_3	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0171779_3	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_4	phrog_72	64.9	1.2e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171779_4	UniRef90_UPI001F3F3E5C	145.0	3.41006e-41	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0171779_4	445972.ANACOL_01825	129.0	1.98e-35	N/A	N/A
structural_annotation	UHGV-0171779_4	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_5	phrog_7566	54.0	0.0000000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0171779_5	693746.OBV_24070	70.5	0.0000000000000341	N/A	N/A
KOfam	UHGV-0171779_6	K03111	131.6	9.5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0171779_6	phrog_44	134.4	7.80001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171779_6	UniRef90_UPI001E2A5A6F	232.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0171779_6	1235835.C814_01372	129.0	2.07e-36	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0171779_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0171779_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0171779_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0171779_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0171779_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_7	phrog_16304	87.5	1.8e-25	N/A	unknown function
UniRef90	UHGV-0171779_7	UniRef90_UPI001E560709	424.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171779_7	290402.Cbei_3733	61.6	0.0000000132	DnaD domain protein	N/A
Pfam	UHGV-0171779_7	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0171779_7	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0171779_7	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_8	phrog_9804	164.7	0	N/A	unknown function
UniRef90	UHGV-0171779_8	UniRef90_UPI001E312ACC	364.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0171779_8	1121344.JHZO01000003_gene981	178.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0171779_8	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0171779_8	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0171779_9	K01160	68.1	2.3e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0171779_9	phrog_34	72.7	6.2e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171779_9	UniRef90_A0A498CNH4	141.0	2.14006e-41	RusA family crossover junction endodeoxyribonuclease	N/A
COG	UHGV-0171779_9	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0171779_9	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0171779_10	K00558	47.5	0.00000000000016	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0171779_10	phrog_757	120.4	1.1e-35	DNA methyltransferase	other
UniRef90	UHGV-0171779_10	UniRef90_A0A2V2GLN0	410.0	0	DNA methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0171779_10	622312.ROSEINA2194_01264	353.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0171779_10	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0171779_10	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0171779_10	PF00145,MF_00341,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_12	phrog_1271	40.6	0.000000000047	HNH endonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0171779_12	TIGR04381	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171779_14	PF18895	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_18	phrog_3136	137.9	3.20001e-41	N/A	unknown function
UniRef90	UHGV-0171779_18	UniRef90_UPI001A9A8D4F	135.0	3.35e-37	ASCH domain-containing protein	N/A
structural_annotation	UHGV-0171779_18	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_21	phrog_3777	79.3	3.1e-23	N/A	unknown function
UniRef90	UHGV-0171779_21	UniRef90_A0A417F883	150.0	3.78351e-44	N/A	N/A
eggNOG-mapper	UHGV-0171779_21	411462.DORLON_00813	77.8	1.18e-16	N/A	N/A
Pfam	UHGV-0171779_21	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0171779_21	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_22	phrog_38832	60.9	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0171779_22	665956.HMPREF1032_00143	59.3	0.00000000309	N/A	N/A
structural_annotation	UHGV-0171779_22	PF18300,MF_01549,NF007981	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_25	phrog_36	41.9	0.000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0171779_25	UniRef90_UPI001D0837DD	115.0	3.54e-30	N/A	N/A
eggNOG-mapper	UHGV-0171779_25	428125.CLOLEP_01806	89.4	1.35e-20	N/A	N/A
structural_annotation	UHGV-0171779_25	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_26	phrog_7339	102.8	3.1e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171779_26	UniRef90_A0A2V2GLL9	525.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0171779_26	1150474.JQJI01000006_gene784	93.2	9.99e-20	metallophosphoesterase	N/A
Pfam	UHGV-0171779_26	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0171779_26	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0171779_26	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_27	phrog_119	58.8	9.2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171779_27	UniRef90_A0A2V2GQ57	133.0	1.88e-39	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0171779_27	1226322.HMPREF1545_00111	92.0	6.64e-24	HNH nucleases	N/A
Pfam	UHGV-0171779_27	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0171779_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0171779_28	phrog_361	68.9	8.6e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0171779_28	UniRef90_A0A1C6H6I9	169.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0171779_28	1329516.JPST01000017_gene431	49.3	0.00000861	Phage terminase, small subunit	N/A
Pfam	UHGV-0171779_28	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0171779_28	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0171779_28	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_29	phrog_9	292.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0171779_29	UniRef90_A0A2V2GQ67	1187.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0171779_29	1226322.HMPREF1545_00113	882.0	0	Phage Terminase	N/A
Pfam	UHGV-0171779_29	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0171779_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0171779_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0171779_29	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_30	phrog_12	184.1	0	portal protein	head and packaging
UniRef90	UHGV-0171779_30	UniRef90_A0A2V2GQD5	776.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0171779_30	1226322.HMPREF1545_00114	504.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0171779_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0171779_30	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0171779_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0171779_30	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0171779_31	K06904	148.7	4.90454e-44	N/A	N/A
PHROG	UHGV-0171779_31	phrog_80	170.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0171779_31	UniRef90_A0A2V2GNJ3	382.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0171779_31	1226322.HMPREF1545_00115	247.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0171779_31	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0171779_31	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0171779_31	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0171779_31	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_32	phrog_10	220.9	0	major head protein	head and packaging
UniRef90	UHGV-0171779_32	UniRef90_A0A2V2GRA2	988.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0171779_32	1226322.HMPREF1545_00116	580.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0171779_32	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0171779_32	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0171779_32	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0171779_32	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0171779_32	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_33	phrog_2550	86.9	1.2e-25	N/A	unknown function
UniRef90	UHGV-0171779_33	UniRef90_UPI001E35E63D	72.0	0.000000000000013	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0171779_33	1226322.HMPREF1545_00117	110.0	1.52e-30	N/A	N/A
structural_annotation	UHGV-0171779_33	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0171779_34	phrog_1951	91.7	4.9e-27	head-tail adaptor	connector
UniRef90	UHGV-0171779_34	UniRef90_A0A2V2GSS5	202.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0171779_34	1226322.HMPREF1545_00118	105.0	3.62e-28	N/A	N/A
structural_annotation	UHGV-0171779_34	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171779_35	UniRef90_UPI00073E355A	165.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0171779_35	665956.HMPREF1032_02261	95.1	1.98e-23	N/A	N/A
Pfam	UHGV-0171779_35	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0171779_35	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171779_36	UniRef90_A0A2X2WS24	55.1	0.0000000358	Phage-like protein	N/A
eggNOG-mapper	UHGV-0171779_36	1145276.T479_19945	52.0	0.0000000942	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0171779	Yes	18,195	52	55	1