vOTU vOTU-137149

vOTU: vOTU-137149

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-137149
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-06317 → vOTU-137149
Host lineage	Bacteria → Firmicutes
Host range breadth	Phylum
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1517994
Biosample ID	N/A
Genome length (bp)	18,716 bps
CheckV completeness	54.34% (Medium-quality)
CDS count	27
CDS density	96.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Spirochaetota → Spirochaetia → Treponematales → Treponemataceae → Treponema_D → Treponema_D sp900541995	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes	Total connections	3	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1517994_1	PF16362	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1517994_4	1123263.AUKY01000111_gene1089	196.0	0	N/A	N/A
structural_annotation	UHGV-1517994_4	PF04545,MF_00674,TIGR01636,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_5	phrog_338	96.5	3.2e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1517994_5	UniRef90_E7MP00	233.0	0	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-1517994_5	706433.HMPREF9430_01271	233.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-1517994_5	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1517994_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1517994_5	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_6	phrog_104	270.1	0	portal protein	head and packaging
UniRef90	UHGV-1517994_6	UniRef90_A0A890GW77	739.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1517994_6	706433.HMPREF9430_01270	712.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1517994_6	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_7	phrog_2494	55.4	3.1e-16	minor head protein	head and packaging
UniRef90	UHGV-1517994_7	UniRef90_UPI00195F2AE2	117.0	6.34e-25	minor capsid protein	N/A
eggNOG-mapper	UHGV-1517994_7	887325.HMPREF0381_0084	129.0	7.93e-30	Phage Mu protein F like protein	N/A
COG	UHGV-1517994_7	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_9	phrog_17688	347.3	0	N/A	unknown function
UniRef90	UHGV-1517994_9	UniRef90_E7MNZ6	914.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1517994_9	706433.HMPREF9430_01267	914.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1517994_9	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1517994_9	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1517994_9	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_10	phrog_233	90.8	4.9e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1517994_10	UniRef90_A0A890GYE3	234.0	0	N/A	N/A
eggNOG-mapper	UHGV-1517994_10	706433.HMPREF9430_01266	241.0	0	N/A	N/A
Pfam	UHGV-1517994_10	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1517994_10	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_11	phrog_32396	126.8	6.6e-38	N/A	unknown function
UniRef90	UHGV-1517994_11	UniRef90_A0A7X2NQN8	444.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1517994_11	706433.HMPREF9430_01265	550.0	0	Phage capsid family	N/A
Pfam	UHGV-1517994_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1517994_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1517994_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_13	phrog_137	93.8	1.2e-27	head-tail adaptor Ad1	connector
UniRef90	UHGV-1517994_13	UniRef90_E7MNZ3	238.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1517994_13	706433.HMPREF9430_01264	238.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1517994_13	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1517994_13	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_14	phrog_501	85.1	7e-25	head closure Hc1	connector
UniRef90	UHGV-1517994_14	UniRef90_A0A139NBR3	124.0	1.83e-34	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1517994_14	706433.HMPREF9430_01263	226.0	0	N/A	N/A
structural_annotation	UHGV-1517994_14	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_15	phrog_387	52.6	0.0000000000000067	neck protein	connector
eggNOG-mapper	UHGV-1517994_15	748224.HMPREF9436_00694	55.8	0.00000000575	N/A	N/A
UniRef90	UHGV-1517994_16	UniRef90_A0A0E8ZUI3	90.9	2.04e-21	Gp45	N/A
eggNOG-mapper	UHGV-1517994_16	706433.HMPREF9430_01261	210.0	0	N/A	N/A
structural_annotation	UHGV-1517994_16	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_17	phrog_117	163.5	0	major tail protein	tail
UniRef90	UHGV-1517994_17	UniRef90_A0A890GW67	314.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1517994_17	706433.HMPREF9430_01260	352.0	0	domain, Protein	N/A
COG	UHGV-1517994_17	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1517994_17	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_18	phrog_1526	85.3	5.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1517994_18	665950.HMPREF1025_02524	63.5	0.00000000000415	N/A	N/A
PHROG	UHGV-1517994_19	phrog_1633	65.6	8e-19	N/A	unknown function
UniRef90	UHGV-1517994_19	UniRef90_A0A847L140	67.4	0.0000000000039	N/A	N/A
eggNOG-mapper	UHGV-1517994_19	938278.CAJO01000051_gene780	67.4	0.00000000000077	N/A	N/A
PHROG	UHGV-1517994_20	phrog_991	217.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1517994_20	UniRef90_E7MNY6	870.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1517994_20	706433.HMPREF9430_01257	870.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1517994_20	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1517994_20	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1517994_20	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1517994_20	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_21	phrog_33	56.4	8e-16	distal tail protein Dit	tail
UniRef90	UHGV-1517994_21	UniRef90_A0A1C5W6B6	141.0	4.73e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-1517994_21	1123263.AUKY01000068_gene490	329.0	0	tail component	N/A
COG	UHGV-1517994_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1517994_21	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_22	phrog_1067	345.7	0	minor head protein	head and packaging
UniRef90	UHGV-1517994_22	UniRef90_A0A412PAL3	1043.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1517994_22	1123263.AUKY01000068_gene489	1043.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1517994_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1517994_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1517994_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1517994_22	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_23	phrog_372	82.2	4.8e-24	tail protein	tail
eggNOG-mapper	UHGV-1517994_23	1123263.AUKY01000046_gene480	162.0	2.41023e-43	N/A	N/A
structural_annotation	UHGV-1517994_23	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
Pfam	UHGV-1517994_24	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-1517994_25	K22409	125.2	7.2e-37	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1517994_25	phrog_291	102.9	3.5e-30	endolysin	lysis
UniRef90	UHGV-1517994_25	UniRef90_E7MNY0	630.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1517994_25	706433.HMPREF9430_01251	630.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1517994_25	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1517994_25	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1517994_25	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1517994_25	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1517994_27	phrog_443	61.0	3.3e-17	holin	lysis
UniRef90	UHGV-1517994_27	UniRef90_UPI0004232E58	135.0	5.68e-40	holin	N/A
eggNOG-mapper	UHGV-1517994_27	1123263.AUKY01000046_gene485	135.0	9.52e-41	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1517994_27	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1517994_27	PF16945	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1517994	Yes	18,716	39	54	1