vOTU vOTU-137679

vOTU: vOTU-137679

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-137679
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00205 → vOTU-137679
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1476597
Biosample ID	N/A
Genome length (bp)	29,914 bps
CheckV completeness	71.19% (Medium-quality)
CDS count	53
CDS density	89.69%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	315	Host agreement	97.46
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_A	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1476597_1	476272.RUMHYD_01776	56.2	0.00000000808	N/A	N/A
PHROG	UHGV-1476597_3	phrog_17977	48.8	0.000000000000091	N/A	unknown function
UniRef90	UHGV-1476597_3	UniRef90_A0A844DHJ8	236.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-1476597_3	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476597_4	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_5	phrog_885	64.3	1.5e-18	major tail protein	tail
UniRef90	UHGV-1476597_5	UniRef90_A0A843J9F0	127.0	6.88e-33	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1476597_5	457396.CSBG_01054	63.2	0.00000000223	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-1476597_5	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-1476597_5	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_8	phrog_28775	132.9	1.7e-39	tail length tape measure protein	tail
UniRef90	UHGV-1476597_8	UniRef90_A0A844DDD5	992.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1476597_8	1492737.FEM08_12070	143.0	5.72e-33	tape measure	N/A
Pfam	UHGV-1476597_8	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1476597_8	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1476597_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1476597_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-1476597_9	UniRef90_R6QN45	89.7	5.21e-18	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-1476597_9	411490.ANACAC_00709	82.0	6.5e-16	phage tail	N/A
COG	UHGV-1476597_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1476597_9	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_10	phrog_3558	204.9	0	tail protein	tail
UniRef90	UHGV-1476597_10	UniRef90_A0A3E2U3C8	171.0	2.93992e-42	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1476597_10	1235799.C818_04233	100.0	7.96e-20	Prophage endopeptidase tail	N/A
Pfam	UHGV-1476597_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1476597_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1476597_10	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-1476597_12	K07273	162.9	0	acm; lysozyme	N/A
PHROG	UHGV-1476597_12	phrog_291	125.2	6.3e-37	endolysin	lysis
UniRef90	UHGV-1476597_12	UniRef90_UPI001D0EE7D8	301.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1476597_12	748224.HMPREF9436_00154	274.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1476597_12	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1476597_12	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1476597_12	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_13	phrog_1863	69.1	3.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1476597_13	718252.FP2_04900	138.0	7.09057e-42	N/A	N/A
PHROG	UHGV-1476597_14	phrog_15303	84.4	9.8e-25	N/A	unknown function
structural_annotation	UHGV-1476597_16	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476597_18	1160721.RBI_I00206	56.2	0.00000000174	N/A	N/A
KOfam	UHGV-1476597_19	K22299	44.9	0.0000000000021	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1476597_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1476597_19	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_21	phrog_3754	95.2	5.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-1476597_21	1235790.C805_00054	109.0	2.61e-29	N/A	N/A
PHROG	UHGV-1476597_22	phrog_21718	84.9	1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1476597_22	397290.C810_05210	79.0	2.19e-16	N/A	N/A
PHROG	UHGV-1476597_23	phrog_22984	70.3	2.5e-20	N/A	unknown function
PHROG	UHGV-1476597_24	phrog_16490	197.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1476597_24	397290.C810_01328	126.0	1.52e-31	N/A	N/A
PHROG	UHGV-1476597_25	phrog_20016	212.7	0	N/A	unknown function
UniRef90	UHGV-1476597_25	UniRef90_A0A285PT46	206.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1476597_25	1226322.HMPREF1545_00077	190.0	0	N/A	N/A
structural_annotation	UHGV-1476597_25	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476597_26	476272.RUMHYD_01772	54.3	0.000000357	N/A	N/A
structural_annotation	UHGV-1476597_26	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1476597_28	K14059	152.2	5.60519e-45	int; integrase	N/A
PHROG	UHGV-1476597_28	phrog_1	165.5	0	integrase	integration and excision
UniRef90	UHGV-1476597_28	UniRef90_A0A6N7TNQ4	678.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1476597_28	411471.SUBVAR_05137	252.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1476597_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1476597_28	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1476597_28	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1476597_29	UniRef90_A0A6N7TLT0	346.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1476597_29	266265.Bxe_A3948	55.5	0.0000000655	Helix-turn-helix domain	N/A
Pfam	UHGV-1476597_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1476597_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1476597_29	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_32	phrog_888	64.6	4.9e-35	N/A	unknown function
UniRef90	UHGV-1476597_32	UniRef90_A0A6N7TMA2	412.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1476597_32	1415774.U728_165	85.1	5.86e-17	Short C-terminal domain	N/A
Pfam	UHGV-1476597_32	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-1476597_32	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1476597_32	PF15947,PF14471	N/A	N/A	N/A	N/A
KOfam	UHGV-1476597_34	K22300	49.2	0.00000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1476597_34	phrog_2967	50.9	0.000000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-1476597_34	UniRef90_A0A844DFR0	190.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1476597_34	748224.HMPREF9436_01444	138.0	2.18e-40	N/A	N/A
Pfam	UHGV-1476597_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1476597_34	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1476597_34	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476597_35	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476597_37	PF16857,NF001981	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_41	phrog_463	106.6	1.9e-31	anti-repressor	transcription regulation
UniRef90	UHGV-1476597_41	UniRef90_A0A3N6C5N5	176.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1476597_41	476272.RUMHYD_03308	146.0	4.21006e-41	BRO family, N-terminal domain	N/A
Pfam	UHGV-1476597_41	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1476597_41	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1476597_41	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-1476597_43	phrog_4652	89.7	4.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1476597_43	397290.C810_01459	156.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-1476597_43	TIGR02582,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_44	phrog_15946	84.1	3.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1476597_44	1445613.JALM01000017_gene5891	54.3	0.000000639	N/A	N/A
structural_annotation	UHGV-1476597_45	PF10743,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476597_46	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476597_47	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476597_49	PF14120	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_51	phrog_561	107.6	1.2e-31	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476597_51	UniRef90_UPI0019565AE5	138.0	1.1e-36	recombinase RecT	N/A
eggNOG-mapper	UHGV-1476597_51	563192.HMPREF0179_00147	150.0	4.83e-41	N/A	N/A
structural_annotation	UHGV-1476597_51	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1476597_52	K03111	132.0	7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1476597_52	phrog_44	141.5	4.49957e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476597_52	UniRef90_A0A844DI52	277.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1476597_52	718252.FP2_06770	199.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1476597_52	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1476597_52	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1476597_52	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1476597_52	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1476597_52	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1476597_53	phrog_14105	186.8	0	N/A	unknown function
UniRef90	UHGV-1476597_53	UniRef90_UPI001C00F934	204.0	0	pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-1476597_53	742740.HMPREF9474_02379	143.0	1.52994e-41	dextransucrase activity	N/A
Pfam	UHGV-1476597_53	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-1476597_53	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1476597_53	PF01469	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1476597	Yes	29,914	52	71	1