vOTU vOTU-138063

vOTU: vOTU-138063

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-138063
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00067 → vGENUS-01205 → vOTU-138063
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1506488
Biosample ID	N/A
Genome length (bp)	33,561 bps
CheckV completeness	89.54% (Medium-quality)
CDS count	62
CDS density	91.89%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508	Total connections	80	Host agreement	97.5
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → CAG-273 sp003534295	Total connections	45	Host agreement	95.56

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1506488_1	phrog_35436	43.7	0.0000000000037	amidase	lysis
UniRef90	UHGV-1506488_1	UniRef90_UPI000FFBAE8C	63.2	0.0000000000332	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1506488_1	553973.CLOHYLEM_07195	70.5	0.0000000000000858	Ami_2	N/A
COG	UHGV-1506488_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1506488_2	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_4	phrog_5555	50.4	0.000000000000017	tail protein	tail
UniRef90	UHGV-1506488_4	UniRef90_R6HDY9	207.0	0	Staphylococcus haemolyticus JCSC1435 DNA complete genome	N/A
Pfam	UHGV-1506488_4	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1506488_4	COG4926	N/A	N/A	Phage-related protein	N/A
eggNOG-mapper	UHGV-1506488_5	428127.EUBDOL_01565	73.2	0.000000000228	cellulase activity	N/A
COG	UHGV-1506488_5	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
eggNOG-mapper	UHGV-1506488_6	1294142.CINTURNW_1706	63.9	0.00000000115	Phage minor structural protein	N/A
COG	UHGV-1506488_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1506488_6	PF21683,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_7	phrog_1194	107.6	6.9e-32	N/A	unknown function
structural_annotation	UHGV-1506488_7	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_8	phrog_1535	240.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1506488_8	UniRef90_R6H5W8	536.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1506488_8	1449343.JQLQ01000002_gene1511	96.3	3.02e-17	SLT domain	N/A
COG	UHGV-1506488_8	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1506488_8	PF09486,NF038178,COG1382	N/A	N/A	N/A	N/A
KOfam	UHGV-1506488_9	K19370	42.5	0.000000000006	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-1506488_9	phrog_10292	68.9	5.2e-20	N/A	unknown function
UniRef90	UHGV-1506488_9	UniRef90_A0A1V4IQS0	164.0	0	TM2 domain protein	N/A
eggNOG-mapper	UHGV-1506488_9	665956.HMPREF1032_00562	162.0	0	TM2 domain	N/A
Pfam	UHGV-1506488_9	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1506488_9	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1506488_9	COG2314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_9	PF05154,PF12773,MF_00788,NF003161	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_11	PF12363	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506488_12	445972.ANACOL_01851	103.0	6.31e-26	N/A	N/A
structural_annotation	UHGV-1506488_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506488_13	665956.HMPREF1032_03624	58.2	0.00000000546	N/A	N/A
structural_annotation	UHGV-1506488_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_14	phrog_59	156.1	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506488_14	UniRef90_UPI0011DDA6C0	149.0	1.69978e-42	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506488_14	213777.R9R2C9_9CAUD	143.0	3.99006e-41	HNH endonuclease	N/A
PADLOC	UHGV-1506488_14	HEase_00016	108.8	8e-32	homing endonuclease	RM
Pfam	UHGV-1506488_14	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1506488_14	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1506488_14	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-1506488_14	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506488_15	665956.HMPREF1032_03623	53.9	0.00000136	N/A	N/A
structural_annotation	UHGV-1506488_15	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_17	phrog_132	43.4	0.0000000000052	head-tail adaptor	connector
Pfam	UHGV-1506488_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1506488_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_18	phrog_247	292.3	0	major head protein	head and packaging
UniRef90	UHGV-1506488_18	UniRef90_R7ITV5	784.0	0	Putative prophage Lp2 protein 40	N/A
eggNOG-mapper	UHGV-1506488_18	445335.CBN_2986	299.0	0	N/A	N/A
COG	UHGV-1506488_18	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-1506488_18	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_19	phrog_172	78.1	1.5e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-1506488_19	UniRef90_A0A3D1PKZ2	66.6	0.000000000257	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1506488_19	1423724.BAMM01000012_gene1365	54.7	0.00000126	N/A	N/A
Pfam	UHGV-1506488_19	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1506488_19	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_21	phrog_872	101.0	1.2e-29	N/A	unknown function
UniRef90	UHGV-1506488_21	UniRef90_UPI00096A68AD	144.0	1.65998e-41	N/A	N/A
eggNOG-mapper	UHGV-1506488_21	1280692.AUJL01000027_gene2162	129.0	1.58e-37	N/A	N/A
Pfam	UHGV-1506488_21	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1506488_21	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1506488_21	PF11195	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506488_24	UniRef90_R5MSH4	182.0	0	Phage head morphogenesis protein SPP1 gp7 family	N/A
eggNOG-mapper	UHGV-1506488_24	1507.HMPREF0262_01176	106.0	2.53e-21	Phage minor capsid protein 2	N/A
COG	UHGV-1506488_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_24	TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_26	phrog_64	232.5	0	portal protein	head and packaging
UniRef90	UHGV-1506488_26	UniRef90_R7IUE9	879.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1506488_26	665956.HMPREF1032_03614	249.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1506488_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1506488_26	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_27	phrog_30251	595.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1506488_27	UniRef90_R7ITA5	724.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1506488_27	469618.FVAG_00794	524.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1506488_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1506488_27	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1506488_27	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_27	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-1506488_28	K07474	127.8	1.4e-37	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1506488_28	phrog_51	148.7	2.66247e-44	terminase small subunit	head and packaging
UniRef90	UHGV-1506488_28	UniRef90_A0A2K9MS24	217.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1506488_28	445335.CBN_2993	189.0	0	Terminase small subunit	N/A
Pfam	UHGV-1506488_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1506488_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1506488_28	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_29	phrog_1233	44.2	0.0000000000031	N/A	unknown function
KOfam	UHGV-1506488_31	K18843	70.0	5e-20	hicB; antitoxin HicB	N/A
PHROG	UHGV-1506488_31	phrog_33232	50.9	0.000000000000027	N/A	unknown function
UniRef90	UHGV-1506488_31	UniRef90_R5NQV3	235.0	0	HicB-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1506488_31	97138.C820_00752	165.0	0	HicB family	N/A
Pfam	UHGV-1506488_31	PF21748	N/A	N/A	UPF0150-like	UPF0150
Pfam	UHGV-1506488_31	PF05534	N/A	N/A	HicB family	HicB
COG	UHGV-1506488_31	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-1506488_31	PF15919,COG1598,COG4691	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_32	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_43	phrog_190	135.1	4.3e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506488_43	UniRef90_UPI000C7A2C17	133.0	2.25e-38	N/A	N/A
eggNOG-mapper	UHGV-1506488_43	293826.Amet_2598	119.0	2.5e-33	N/A	N/A
Pfam	UHGV-1506488_43	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1506488_43	PF06356	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506488_45	742735.HMPREF9467_00874	53.1	0.0000000648	N/A	N/A
PHROG	UHGV-1506488_46	phrog_1123	55.7	7.3e-16	N/A	unknown function
UniRef90	UHGV-1506488_46	UniRef90_UPI0012E37870	61.6	0.000000000351	DNA gyrase	N/A
eggNOG-mapper	UHGV-1506488_46	445972.ANACOL_03346	61.2	0.0000000000755	N/A	N/A
structural_annotation	UHGV-1506488_46	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_47	phrog_9804	100.6	1.6e-29	N/A	unknown function
UniRef90	UHGV-1506488_47	UniRef90_A0A1I2QMA2	173.0	0	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-1506488_47	1499683.CCFF01000013_gene503	170.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1506488_47	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1506488_47	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_48	phrog_16304	98.3	1.1e-28	N/A	unknown function
UniRef90	UHGV-1506488_48	UniRef90_A0A1V5XBX3	108.0	5.9e-28	N/A	N/A
eggNOG-mapper	UHGV-1506488_48	1105031.HMPREF1141_0552	74.3	5.82e-16	N/A	N/A
Pfam	UHGV-1506488_48	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1506488_48	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_51	phrog_7566	49.2	0.000000000000035	N/A	unknown function
eggNOG-mapper	UHGV-1506488_51	1118057.CAGX01000020_gene1648	59.3	0.000000000675	N/A	N/A
PHROG	UHGV-1506488_52	phrog_72	67.8	1.8e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1506488_52	445972.ANACOL_00148	65.5	0.0000000000427	N/A	N/A
Pfam	UHGV-1506488_52	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1506488_52	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-1506488_53	K03111	146.2	3.29305e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1506488_53	phrog_44	147.5	7.84727e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506488_53	UniRef90_R6XT61	197.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1506488_53	1291050.JAGE01000001_gene1719	168.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1506488_53	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1506488_53	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1506488_53	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1506488_53	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1506488_53	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_54	phrog_14970	258.9	0	N/A	unknown function
UniRef90	UHGV-1506488_54	UniRef90_A0A3P6JH63	188.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1506488_54	469604.HMPREF0946_00830	206.0	0	DNA recombination	N/A
COG	UHGV-1506488_54	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1506488_54	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1506488_55	phrog_253	101.9	6.5e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506488_55	UniRef90_A0A521X8B7	85.5	6.28e-18	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1506488_55	686340.Metal_4000	80.9	6.35e-17	PFAM Siphovirus Gp157	N/A
Pfam	UHGV-1506488_55	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1506488_55	PF05565,NF002139	N/A	N/A	N/A	N/A
KOfam	UHGV-1506488_59	K07729	44.4	0.0000000000032	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1506488_59	phrog_3	43.6	0.000000000012	transcriptional repressor	transcription regulation
UniRef90	UHGV-1506488_59	UniRef90_UPI00195A0A22	75.1	2.36e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1506488_59	97139.C824_00527	57.8	0.00000000912	An automated process has identified a potential problem with this gene model	N/A
Pfam	UHGV-1506488_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1506488_59	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1506488_59	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1506488_60	K22300	59.1	1.1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1506488_60	phrog_8	67.5	2.8e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1506488_60	UniRef90_A0A3D1PLJ6	116.0	3.98e-31	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1506488_60	997350.HMPREF9129_1691	72.0	0.0000000000000835	PFAM Helix-turn-helix	N/A
Pfam	UHGV-1506488_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1506488_60	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1506488_60	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506488_61	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1506488_62	K14059	273.5	0	int; integrase	N/A
PHROG	UHGV-1506488_62	phrog_1	241.3	0	integrase	integration and excision
UniRef90	UHGV-1506488_62	UniRef90_R6HDS7	329.0	0	Phage integrase	N/A
eggNOG-mapper	UHGV-1506488_62	857293.CAAU_0761	265.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1506488_62	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1506488_62	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1506488_62	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1506488_62	PF00589,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1506488	Yes	33,561	29	90	1