vOTU vOTU-138106

vOTU: vOTU-138106

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-138106
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00121 → vOTU-138106
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1464936
Biosample ID	SAMEA3360679
Genome length (bp)	20,287 bps
CheckV completeness	55.26% (Medium-quality)
CDS count	40
CDS density	91.45%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	190	Host agreement	83.68
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	27	Host agreement	96.3

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1464936_1	phrog_10613	88.5	4.9e-26	tail length tape measure protein	tail
UniRef90	UHGV-1464936_1	UniRef90_A0A7X6UMX1	132.0	2.51e-32	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1464936_1	1195236.CTER_5104	127.0	7.87e-31	nuclear chromosome segregation	N/A
COG	UHGV-1464936_1	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1464936_1	PF06120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464936_2	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_3	phrog_88	80.3	2.7e-23	major tail protein	tail
UniRef90	UHGV-1464936_3	UniRef90_S0FUN2	116.0	2.37e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1464936_3	1195236.CTER_5106	116.0	3.98e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1464936_3	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1464936_3	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464936_3	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_4	phrog_5	44.7	0.000000000003	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1464936_4	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464936_5	1487921.DP68_11350	59.3	0.000000000557	N/A	N/A
structural_annotation	UHGV-1464936_5	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_6	phrog_1951	74.8	8.5e-22	head-tail adaptor	connector
UniRef90	UHGV-1464936_6	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1464936_6	1094508.Tsac_2422	52.4	0.000000225	Phage head-tail joining protein	N/A
Pfam	UHGV-1464936_6	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1464936_6	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1464936_6	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1464936_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_7	phrog_5223	44.1	0.0000000000028	neck protein	connector
UniRef90	UHGV-1464936_7	UniRef90_UPI000BEC4770	54.7	0.000000106	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1464936_7	931626.Awo_c31020	49.3	0.00000285	N/A	N/A
PHROG	UHGV-1464936_8	phrog_10	182.9	0	major head protein	head and packaging
UniRef90	UHGV-1464936_8	UniRef90_UPI00189AE5FE	413.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1464936_8	1280689.AUJC01000011_gene1521	379.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1464936_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1464936_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1464936_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1464936_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1464936_9	K01358	132.4	5.5e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1464936_9	phrog_94	201.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1464936_9	UniRef90_UPI0018979DC8	203.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1464936_9	1280689.AUJC01000011_gene1520	191.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1464936_9	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1464936_9	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1464936_9	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_10	phrog_12	179.8	0	portal protein	head and packaging
UniRef90	UHGV-1464936_10	UniRef90_UPI001898FCCE	502.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1464936_10	626523.GCWU000342_01027	501.0	0	Portal protein	N/A
Pfam	UHGV-1464936_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1464936_10	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1464936_10	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_11	phrog_9	381.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1464936_11	UniRef90_UPI001D07C789	789.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1464936_11	1203606.HMPREF1526_00981	737.0	0	Terminase	N/A
Pfam	UHGV-1464936_11	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1464936_11	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1464936_11	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1464936_11	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_12	phrog_1066	131.2	3.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-1464936_12	1382358.JHVN01000024_gene1703	124.0	3.37e-35	N/A	N/A
structural_annotation	UHGV-1464936_12	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_13	phrog_119	48.3	0.00000000000013	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464936_13	UniRef90_A0A174XSZ8	125.0	2.91e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1464936_13	1235793.C809_01915	121.0	8.62e-34	HNH endonuclease	N/A
Pfam	UHGV-1464936_13	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1464936_13	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-1464936_14	1297617.JPJD01000059_gene2640	83.2	1.44e-18	N/A	N/A
structural_annotation	UHGV-1464936_14	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_15	phrog_3584	115.1	5.8e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1464936_15	537013.CLOSTMETH_02141	76.6	0.0000000000000253	N/A	N/A
structural_annotation	UHGV-1464936_15	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_19	phrog_374	56.3	6.9e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1464936_19	1423807.BACO01000037_gene1103	66.6	0.00000000000647	N/A	N/A
PHROG	UHGV-1464936_21	phrog_190	96.1	4.2e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464936_21	UniRef90_UPI0006C2AC63	120.0	7.99e-32	N/A	N/A
eggNOG-mapper	UHGV-1464936_21	693746.OBV_25250	116.0	3.25e-31	N/A	N/A
Pfam	UHGV-1464936_21	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1464936_21	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_24	phrog_38832	47.3	0.00000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1464936_24	445972.ANACOL_00165	65.9	0.0000000000877	N/A	N/A
PHROG	UHGV-1464936_25	phrog_355	73.7	2.5e-21	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464936_25	UniRef90_R5AT00	114.0	5.32e-31	Gp57	N/A
eggNOG-mapper	UHGV-1464936_25	573061.Clocel_3558	88.2	1.76e-21	N/A	N/A
Pfam	UHGV-1464936_25	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1464936_25	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1464936_25	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_26	phrog_3136	134.1	4.7e-40	N/A	unknown function
UniRef90	UHGV-1464936_26	UniRef90_A0A843GST0	94.0	8.76e-21	ASCH domain-containing protein	N/A
COG	UHGV-1464936_26	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1464936_26	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_28	phrog_9298	61.6	1.1e-17	radical SAM domain protein	other
UniRef90	UHGV-1464936_28	UniRef90_D4C6F1	310.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1464936_28	742738.HMPREF9460_03770	291.0	0	radical SAM domain protein	N/A
COG	UHGV-1464936_28	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1464936_28	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464936_32	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464936_33	NF041247	N/A	N/A	N/A	N/A
KOfam	UHGV-1464936_36	K18830	55.7	0.0000000000000012	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1464936_36	phrog_8	55.8	7.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1464936_36	UniRef90_A0A2U1BEG8	126.0	3.51e-35	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1464936_36	445972.ANACOL_03315	112.0	1.4e-30	N/A	N/A
PADLOC	UHGV-1464936_36	retron_type_VI_hth_cluster2_1	41.4	0.00000000003	N/A	Retron
Pfam	UHGV-1464936_36	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1464936_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1464936_36	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464936_38	552398.HMPREF0866_02158	53.5	0.00000466	NOG18738 non supervised orthologous group	N/A
COG	UHGV-1464936_38	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1464936_38	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-1464936_39	phrog_10292	73.6	8.5e-22	N/A	unknown function
UniRef90	UHGV-1464936_39	UniRef90_A0A416W984	97.8	1.59e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1464936_39	1033810.HLPCO_001631	81.6	2.77e-18	TM2 domain	N/A
Pfam	UHGV-1464936_39	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1464936_39	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1464936_39	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1464936_40	K22299	49.3	0.00000000000011	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1464936_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1464936_40	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1464936_40	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1464936	Yes	20,287	59	55	1
UHGV-0091249	No	20,287	59	55	1