vOTU vOTU-138147

vOTU: vOTU-138147

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-138147
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-04596 → vOTU-138147
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0037253
Biosample ID	N/A
Genome length (bp)	40,789 bps
CheckV completeness	68.07% (Medium-quality)
CDS count	54
CDS density	84.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-1193 → ERR7745402_bin.25	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0037253_1	UniRef90_UPI001956135A	120.0	1.18e-34	N/A	N/A
eggNOG-mapper	UHGV-0037253_1	1414720.CBYM010000018_gene3013	130.0	3.95e-39	N/A	N/A
Pfam	UHGV-0037253_1	PF13783	N/A	N/A	N/A	DUF4177
eggNOG-mapper	UHGV-0037253_2	1414720.CBYM010000018_gene3014	218.0	0	N/A	N/A
UniRef90	UHGV-0037253_4	UniRef90_UPI001A9BD43C	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037253_4	428126.CLOSPI_00839	129.0	2.06e-37	N/A	N/A
Pfam	UHGV-0037253_4	PF12650	N/A	N/A	N/A	DUF3784
COG	UHGV-0037253_5	COG1996	N/A	N/A	DNA-directed RNA polymerase, subunit RPC12/RpoP, contains C4-type Zn-finger	N/A
PHROG	UHGV-0037253_6	phrog_4538	155.3	0	N/A	unknown function
UniRef90	UHGV-0037253_6	UniRef90_UPI000772F45F	164.0	3.81153e-43	zinc-ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0037253_6	1347369.CCAD010000077_gene2881	75.5	0.00000000000333	Restriction endonuclease	N/A
COG	UHGV-0037253_6	COG3440	N/A	N/A	Predicted restriction endonuclease	N/A
eggNOG-mapper	UHGV-0037253_8	272562.CA_C1162	54.3	0.000000016	N/A	N/A
KOfam	UHGV-0037253_9	K18640	107.5	1.7e-31	parM, stbA; plasmid segregation protein ParM	N/A
PHROG	UHGV-0037253_9	phrog_691	103.1	2.6e-30	partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037253_9	UniRef90_UPI00189F854E	208.0	0	ParM/StbA family protein	N/A
eggNOG-mapper	UHGV-0037253_9	272562.CA_C1161	174.0	0	cell division	N/A
Pfam	UHGV-0037253_9	PF17989	N/A	N/A	Actin like proteins N terminal domain	ALP_N
COG	UHGV-0037253_9	COG0849	N/A	N/A	Cell division ATPase FtsA	N/A
structural_annotation	UHGV-0037253_9	PF06723,MF_02207,NF010498,COG1077	N/A	N/A	N/A	N/A
KOfam	UHGV-0037253_11	K02086	40.8	0.000000000015	dnaD; DNA replication protein	N/A
PHROG	UHGV-0037253_11	phrog_186	46.2	0.00000000000026	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037253_11	UniRef90_UPI0018A8BE8D	506.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0037253_11	632245.CLP_2588	71.2	0.0000000000119	N/A	N/A
Pfam	UHGV-0037253_11	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
UniRef90	UHGV-0037253_13	UniRef90_UPI001D0FC87D	316.0	0	zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0037253_13	37659.JNLN01000001_gene2382	412.0	0	N/A	N/A
KOfam	UHGV-0037253_14	K04763	192.9	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0037253_14	phrog_1	166.6	0	integrase	integration and excision
UniRef90	UHGV-0037253_14	UniRef90_A0A1U6JDY7	615.0	0	Putative DNA integration/recombination protein	N/A
eggNOG-mapper	UHGV-0037253_14	1499684.CCNP01000020_gene2299	518.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0037253_14	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0037253_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0037253_14	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0037253_14	PF00589,PF02899,MF_01808,TIGR02225,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_15	phrog_99	129.2	2.6e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037253_15	UniRef90_A0A174H7R1	366.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0037253_15	86416.Clopa_2526	106.0	9.57e-26	AP2 domain	N/A
Pfam	UHGV-0037253_15	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0037253_15	PF10729,PF13392	N/A	N/A	N/A	N/A
KOfam	UHGV-0037253_16	K05995	160.7	0	pepE; dipeptidase E [EC:3.4.13.21]	N/A
UniRef90	UHGV-0037253_16	UniRef90_A0A414D3F1	356.0	0	Peptidase S51	N/A
eggNOG-mapper	UHGV-0037253_16	748224.HMPREF9436_00250	342.0	0	Peptidase family S51	N/A
Pfam	UHGV-0037253_16	PF03575	N/A	N/A	Peptidase family S51	Peptidase_S51
COG	UHGV-0037253_16	COG3340	N/A	N/A	Peptidase E	N/A
structural_annotation	UHGV-0037253_16	PF03575,MF_00510,NF003642,COG3340	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037253_17	UniRef90_A0A6B4Q6A4	57.8	0.00000000228	Iduronate sulfatase	N/A
PHROG	UHGV-0037253_18	phrog_7043	310.5	0	tail protein	tail
UniRef90	UHGV-0037253_18	UniRef90_UPI000AB4EEF7	1218.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0037253_18	1499683.CCFF01000017_gene2158	476.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0037253_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0037253_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0037253_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0037253_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037253_19	UniRef90_A0A1C6CWB5	313.0	0	Phage tail protein	N/A
Pfam	UHGV-0037253_19	PF20753	N/A	N/A	Phage tail C-terminal domain	DUF6558_C
PHROG	UHGV-0037253_20	phrog_33	83.5	3.9e-24	distal tail protein Dit	tail
UniRef90	UHGV-0037253_20	UniRef90_UPI0006C51AB9	541.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0037253_20	1499683.CCFF01000017_gene2156	201.0	0	tail component	N/A
COG	UHGV-0037253_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0037253_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_21	phrog_17020	121.3	7.1e-36	N/A	unknown function
UniRef90	UHGV-0037253_21	UniRef90_UPI00140C19DB	72.4	0.00000000000507	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0037253_21	1499683.CCFF01000017_gene2155	208.0	0	tape measure	N/A
COG	UHGV-0037253_21	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0037253_22	phrog_9959	105.9	9.7e-32	tail length tape measure protein	tail
UniRef90	UHGV-0037253_22	UniRef90_UPI0006C020C3	640.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0037253_22	1499683.CCFF01000005_gene78	479.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0037253_22	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0037253_22	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0037253_22	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0037253_24	phrog_1021	44.1	0.0000000000011	N/A	unknown function
PHROG	UHGV-0037253_25	phrog_885	47.6	0.00000000000018	major tail protein	tail
structural_annotation	UHGV-0037253_25	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037253_26	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_27	phrog_5	41.4	0.000000000036	tail completion or Neck1 protein	connector
UniRef90	UHGV-0037253_27	UniRef90_UPI0006BFDA1B	211.0	0	HK97 gp10 family phage protein	N/A
Pfam	UHGV-0037253_27	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0037253_27	PF04883,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037253_28	1321778.HMPREF1982_03552	55.1	0.0000000186	N/A	N/A
structural_annotation	UHGV-0037253_28	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037253_29	UniRef90_A0A6B4N3Y5	55.5	0.0000000684	Phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0037253_29	1415774.U728_720	57.4	0.00000000204	N/A	N/A
PHROG	UHGV-0037253_30	phrog_422	304.9	0	major head protein	head and packaging
UniRef90	UHGV-0037253_30	UniRef90_A0A3P6KSI0	322.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037253_30	1211844.CBLM010000016_gene1491	321.0	0	N/A	N/A
structural_annotation	UHGV-0037253_30	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_31	phrog_172	72.6	6.5e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0037253_31	UniRef90_UPI0006C20523	312.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037253_31	1499683.CCFF01000017_gene2146	157.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0037253_31	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0037253_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_32	phrog_115	168.4	0	minor head protein	head and packaging
UniRef90	UHGV-0037253_32	UniRef90_UPI0006C641A8	506.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0037253_32	1499683.CCFF01000005_gene66	263.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0037253_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0037253_32	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0037253_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037253_32	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_33	phrog_64	261.5	0	portal protein	head and packaging
UniRef90	UHGV-0037253_33	UniRef90_UPI0006C08419	862.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0037253_33	1415774.U728_1093	507.0	0	portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0037253_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0037253_33	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_34	phrog_38	229.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0037253_34	UniRef90_UPI0006C4E0BD	1032.0	0	terminase	N/A
eggNOG-mapper	UHGV-0037253_34	1499683.CCFF01000017_gene2143	774.0	0	TIGRFAM Phage	N/A
COG	UHGV-0037253_34	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0037253_34	PF17289,PF03354,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_35	phrog_1762	79.3	4.1e-23	N/A	unknown function
UniRef90	UHGV-0037253_35	UniRef90_UPI001C1DF71B	281.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037253_35	398512.JQKC01000004_gene5247	64.7	0.00000000255	N/A	N/A
Pfam	UHGV-0037253_35	PF11185	N/A	N/A	N/A	DUF2971
KOfam	UHGV-0037253_36	K14060	124.1	1.4e-36	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0037253_36	phrog_125	155.9	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037253_36	UniRef90_UPI0006C3AFF3	367.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0037253_36	641107.CDLVIII_3183	294.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0037253_36	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0037253_36	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0037253_36	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_37	phrog_2538	71.8	8.2e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0037253_37	UniRef90_A0A7G5NTL4	114.0	9.24e-30	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0037253_37	1345695.CLSA_c30000	141.0	3.16007e-41	N/A	N/A
structural_annotation	UHGV-0037253_37	PF13022,COG3677	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_38	phrog_5663	106.3	2.8e-31	N/A	unknown function
UniRef90	UHGV-0037253_38	UniRef90_UPI001459D798	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037253_38	938288.HG326226_gene840	91.7	7.25e-21	N/A	N/A
structural_annotation	UHGV-0037253_38	PF10386	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037253_39	UniRef90_A0A1C6F615	155.0	0	SAP domain-containing protein	N/A
UniRef90	UHGV-0037253_41	UniRef90_UPI000DCFDBE1	320.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0037253_41	545697.HMPREF0216_01757	252.0	0	Type III restriction enzyme, res subunit	N/A
eggNOG-mapper	UHGV-0037253_42	545697.HMPREF0216_01757	92.4	2.42e-19	Type III restriction enzyme, res subunit	N/A
Pfam	UHGV-0037253_42	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
UniRef90	UHGV-0037253_44	UniRef90_A0A1C6F691	58.9	0.000000000401	N/A	N/A
structural_annotation	UHGV-0037253_44	PF18903	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037253_45	545697.HMPREF0216_01759	308.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037253_46	545697.HMPREF0216_01759	763.0	0	N/A	N/A
Pfam	UHGV-0037253_46	PF05183	N/A	N/A	RNA dependent RNA polymerase	RdRP
structural_annotation	UHGV-0037253_46	PF05183	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037253_47	UniRef90_UPI0003A7FFFB	86.7	1.87e-21	N/A	N/A
KOfam	UHGV-0037253_49	K02315	109.7	3.1e-32	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0037253_49	phrog_27475	202.9	0	N/A	unknown function
UniRef90	UHGV-0037253_49	UniRef90_UPI000E50D649	500.0	0	IS21-like element helper ATPase IstB	N/A
eggNOG-mapper	UHGV-0037253_49	697303.Thewi_2165	399.0	0	PFAM IstB domain protein ATP-binding protein	N/A
PADLOC	UHGV-0037253_49	DrmD_00013	154.0	1.4013e-45	DrmD	DISARM
Pfam	UHGV-0037253_49	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0037253_49	NF038214.1	N/A	N/A	IS21-like element helper ATPase IstB	N/A
COG	UHGV-0037253_49	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0037253_49	PF01695,MF_00377,NF038214,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0037253_50	phrog_1157	242.2	0	transposase	integration and excision
UniRef90	UHGV-0037253_50	UniRef90_UPI000E5337B4	794.0	0	IS21 family transposase	N/A
eggNOG-mapper	UHGV-0037253_50	697303.Thewi_2166	571.0	0	PFAM Integrase catalytic	N/A
NCBIFam	UHGV-0037253_50	NF033546.1	N/A	N/A	IS21 family transposase	N/A
COG	UHGV-0037253_50	COG4584	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0037253_50	PF02914,NF033546,COG4584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037253_51	UniRef90_UPI001C0C3530	76.3	0.000000000000568	SprT-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0037253_51	536233.CLO_1348	99.4	3.09e-22	N/A	N/A
KOfam	UHGV-0037253_53	K07727	69.5	8e-20	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0037253_53	UniRef90_A0A1C6HGA6	130.0	1.38e-38	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-0037253_53	1321778.HMPREF1982_03529	66.2	0.0000000000001	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0037253_53	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0037253_53	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0037253_53	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0037253	Yes	40,789	28	68	1