vOTU vOTU-138388

vOTU: vOTU-138388

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-138388
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00372 → vGENUS-00435 → vOTU-138388
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1868129
Biosample ID	SAMN18819074
Genome length (bp)	21,159 bps
CheckV completeness	55.30% (Medium-quality)
CDS count	44
CDS density	89.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	83	Host agreement	96.39
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1868129_1	phrog_119	79.0	6.3e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1868129_1	UniRef90_G9YSB5	163.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_1	574375.BAGA_00230	85.9	3.51e-20	HNH endonuclease	N/A
Pfam	UHGV-1868129_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1868129_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1868129_2	phrog_3584	72.6	5.3e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1868129_2	693746.OBV_19950	318.0	0	N/A	N/A
structural_annotation	UHGV-1868129_2	PF05840	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868129_6	PF13211	N/A	N/A	N/A	N/A
PHROG	UHGV-1868129_7	phrog_3136	107.0	4.8e-32	N/A	unknown function
UniRef90	UHGV-1868129_7	UniRef90_UPI001C00EDA4	131.0	1.24e-35	ASCH domain-containing protein	N/A
COG	UHGV-1868129_7	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1868129_7	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1868129_8	phrog_38832	62.2	7.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1868129_8	665956.HMPREF1032_03087	64.3	0.0000000000536	N/A	N/A
structural_annotation	UHGV-1868129_8	PF11717,TIGR02450	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868129_10	PF06657	N/A	N/A	N/A	N/A
Pfam	UHGV-1868129_13	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-1868129_15	K03111	137.4	1.6e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1868129_15	phrog_44	132.9	2.6e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1868129_15	UniRef90_UPI001C02B0E9	246.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1868129_15	1226322.HMPREF1545_04080	196.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1868129_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1868129_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1868129_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1868129_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1868129_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1868129_17	K03497	101.0	2.3e-29	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1868129_17	phrog_27290	123.8	1.19993e-41	N/A	unknown function
UniRef90	UHGV-1868129_17	UniRef90_UPI00195EFCA8	399.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_17	742738.HMPREF9460_00856	113.0	3.09e-24	ParB-like nuclease domain	N/A
Pfam	UHGV-1868129_17	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1868129_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1868129_17	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1868129_17	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-1868129_18	K03496	215.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1868129_18	phrog_164	177.3	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1868129_18	UniRef90_UPI001BB48231	286.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-1868129_18	693746.OBV_19850	229.0	0	Anion-transporting ATPase	N/A
Pfam	UHGV-1868129_18	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1868129_18	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1868129_18	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1868129_20	K02314	349.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1868129_20	phrog_19	278.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1868129_20	UniRef90_UPI001C0112E5	282.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1868129_20	742738.HMPREF9460_00852	257.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1868129_20	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1868129_20	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1868129_20	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1868129_20	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1868129_21	phrog_270	94.7	1.5e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1868129_21	UniRef90_UPI001ADEF5BC	181.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_21	742738.HMPREF9460_00851	164.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-1868129_21	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1868129_21	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1868129_21	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1868129_22	phrog_6499	141.3	2.40042e-42	transcriptional regulator	transcription regulation
UniRef90	UHGV-1868129_22	UniRef90_UPI001C01DF91	148.0	1.16994e-41	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1868129_22	1226322.HMPREF1545_00092	125.0	1.93e-33	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1868129_22	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1868129_22	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1868129_22	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868129_23	PF12728,NF040990	N/A	N/A	N/A	N/A
KOfam	UHGV-1868129_24	K07729	63.3	6e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1868129_24	phrog_8	50.1	0.000000000000071	transcriptional regulator	transcription regulation
UniRef90	UHGV-1868129_24	UniRef90_UPI00030EB95F	70.1	0.0000000000000162	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_24	1007096.BAGW01000011_gene2356	70.1	0.00000000000000272	sequence-specific DNA binding	N/A
Pfam	UHGV-1868129_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1868129_24	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1868129_24	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1868129_25	phrog_8	53.5	0.0000000000000062	transcriptional regulator	transcription regulation
UniRef90	UHGV-1868129_25	UniRef90_A0A7U9T6J8	119.0	7.91e-34	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_25	97138.C820_00783	92.0	1.37e-23	Helix-turn-helix domain	N/A
Pfam	UHGV-1868129_25	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1868129_25	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868129_26	PF03444,COG0640	N/A	N/A	N/A	N/A
UniRef90	UHGV-1868129_27	UniRef90_UPI001E54DE4F	99.4	4.81e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_27	1226322.HMPREF1545_00148	79.3	9.77e-18	Transcriptional	N/A
COG	UHGV-1868129_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1868129_27	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1868129_29	UniRef90_UPI001956EF77	170.0	0	stalk domain-containing protein	N/A
eggNOG-mapper	UHGV-1868129_29	1226322.HMPREF1545_01476	120.0	6.6e-32	Copper amine oxidase N-terminal domain	N/A
Pfam	UHGV-1868129_29	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
PHROG	UHGV-1868129_30	phrog_17982	72.9	4e-21	N/A	unknown function
UniRef90	UHGV-1868129_30	UniRef90_UPI000C823954	89.7	5.18e-19	N/A	N/A
eggNOG-mapper	UHGV-1868129_30	720554.Clocl_1541	79.3	0.00000000000000125	N/A	N/A
Pfam	UHGV-1868129_30	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-1868129_30	PF14020	N/A	N/A	N/A	N/A
Pfam	UHGV-1868129_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1868129_31	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-1868129_31	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1868129_32	K14059	212.2	0	int; integrase	N/A
PHROG	UHGV-1868129_32	phrog_1	212.1	0	integrase	integration and excision
UniRef90	UHGV-1868129_32	UniRef90_A0A1H8A220	281.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1868129_32	693746.OBV_01970	203.0	0	Phage integrase family	N/A
Pfam	UHGV-1868129_32	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1868129_32	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1868129_32	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1868129_32	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1868129_33	1378168.N510_03079	59.7	0.000000022	N/A	N/A
PHROG	UHGV-1868129_35	phrog_20016	173.0	0	N/A	unknown function
UniRef90	UHGV-1868129_35	UniRef90_A0A2Z4QB67	165.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1868129_35	1226322.HMPREF1545_00077	151.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1868129_35	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1868129_36	phrog_16490	168.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1868129_36	1408437.JNJN01000043_gene803	136.0	1.54e-36	N/A	N/A
PHROG	UHGV-1868129_37	phrog_22984	89.4	2.8e-26	N/A	unknown function
PHROG	UHGV-1868129_38	phrog_21718	99.9	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1868129_38	397290.C810_05210	67.8	0.00000000000392	N/A	N/A
PHROG	UHGV-1868129_39	phrog_3754	118.7	3.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-1868129_39	1226322.HMPREF1545_00073	171.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1868129	Yes	21,159	57	55	1