vOTU vOTU-138734

vOTU: vOTU-138734

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-138734
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-724 → CAG-724 sp003524145
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-01437 → vGENUS-01644 → vOTU-138734
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-272 → CAG-272 sp000433515
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1489273
Biosample ID	N/A
Genome length (bp)	44,397 bps
CheckV completeness	83.34% (Medium-quality)
CDS count	57
CDS density	93.47%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-272 → CAG-272 sp000433515	Total connections	44	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-724 → CAG-724 sp003524145	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 83.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1489273_1	K17680	327.2	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1489273_1	phrog_239	280.2	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489273_1	UniRef90_A0A413G4P8	544.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1489273_1	247490.KSU1_C0210	320.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1489273_1	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-1489273_1	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1489273_1	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1489273_1	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_4	phrog_8489	264.0	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489273_4	UniRef90_A0A022N9G2	251.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-1489273_4	1139219.I569_01402	239.0	0	DnaD domain protein	N/A
COG	UHGV-1489273_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1489273_4	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-1489273_6	K03111	134.4	1.3e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1489273_6	phrog_44	145.8	2.20004e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489273_6	UniRef90_R6TSJ9	172.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1489273_6	445972.ANACOL_04434	120.0	9.12e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1489273_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1489273_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1489273_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1489273_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1489273_6	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_7	phrog_4973	53.2	0.0000000000000049	N/A	unknown function
Pfam	UHGV-1489273_7	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1489273_7	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-1489273_8	UniRef90_UPI0012AD39DD	54.7	0.00000708	leucine-rich repeat protein	N/A
UniRef90	UHGV-1489273_9	UniRef90_A0A098GES5	105.0	1.77e-27	Putative phage associated protein	N/A
structural_annotation	UHGV-1489273_9	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_10	phrog_7566	97.4	7.9e-29	N/A	unknown function
PHROG	UHGV-1489273_11	phrog_72	65.3	8.8e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489273_11	UniRef90_A0A8D9PDS2	149.0	9.41673e-43	NinB protein	N/A
eggNOG-mapper	UHGV-1489273_11	445972.ANACOL_01825	121.0	1.5e-32	N/A	N/A
structural_annotation	UHGV-1489273_11	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-1489273_12	UniRef90_B0PAM4	149.0	3.46961e-42	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1489273_12	1308866.J416_09399	56.2	0.000000671	YqaJ viral recombinase family	N/A
COG	UHGV-1489273_12	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1489273_12	PF12684,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_13	phrog_659	51.6	0.000000000000014	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489273_13	UniRef90_A0A6N9QJT6	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-1489273_13	33035.JPJF01000135_gene5082	126.0	2.02e-33	N/A	N/A
Pfam	UHGV-1489273_13	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1489273_13	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
Pfam	UHGV-1489273_17	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
PHROG	UHGV-1489273_19	phrog_8	44.9	0.0000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-1489273_19	UniRef90_A0A8J6PFI8	83.6	1.56e-18	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1489273_19	1378168.N510_01712	69.7	0.000000000000773	N/A	N/A
structural_annotation	UHGV-1489273_19	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1489273_24	UniRef90_A0A1Q6SAI0	127.0	1.12e-34	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1489273_24	556261.HMPREF0240_01759	53.5	0.00000186	Putative restriction endonuclease	N/A
Pfam	UHGV-1489273_24	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1489273_24	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-1489273_24	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1489273_25	K14059	187.7	0	int; integrase	N/A
PHROG	UHGV-1489273_25	phrog_1	176.5	0	integrase	integration and excision
UniRef90	UHGV-1489273_25	UniRef90_A0A1C7G906	213.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1489273_25	887325.HMPREF0381_0346	201.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1489273_25	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1489273_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1489273_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1489273_25	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1489273_26	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1489273_27	1408437.JNJN01000043_gene802	110.0	1.76e-29	N/A	N/A
eggNOG-mapper	UHGV-1489273_28	476272.RUMHYD_01954	75.9	0.000000000000063	N/A	N/A
eggNOG-mapper	UHGV-1489273_29	658655.HMPREF0988_00918	50.1	0.0000004	N/A	N/A
eggNOG-mapper	UHGV-1489273_31	1280694.AUJQ01000007_gene1026	53.5	0.000000511	sequence-specific DNA binding	N/A
Pfam	UHGV-1489273_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1489273_31	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1489273_33	PF13973	N/A	N/A	N/A	N/A
KOfam	UHGV-1489273_36	K07474	41.2	0.000000000029	xtmA; phage terminase small subunit	N/A
KOfam	UHGV-1489273_37	K06909	120.5	1.8e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1489273_37	phrog_979	143.1	9.94922e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1489273_37	UniRef90_A0A413FUY4	437.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1489273_37	665956.HMPREF1032_03884	374.0	0	Terminase-like family	N/A
Pfam	UHGV-1489273_37	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1489273_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1489273_37	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_40	phrog_156	114.4	1.2e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-1489273_40	588581.Cpap_1526	296.0	0	N/A	N/A
structural_annotation	UHGV-1489273_40	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_42	phrog_14242	100.4	6.6e-30	major head protein	head and packaging
UniRef90	UHGV-1489273_42	UniRef90_A0A3D2CI53	322.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1489273_42	871968.DESME_08900	65.5	0.0000000094	N/A	N/A
NCBIFam	UHGV-1489273_42	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1489273_42	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1489273_44	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_45	phrog_511	67.7	1e-19	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1489273_45	657322.FPR_02360	71.2	0.00000000029	N/A	N/A
structural_annotation	UHGV-1489273_45	PF11134,MF_00923,NF010237,NF038128,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1489273_47	552398.HMPREF0866_03195	52.8	0.000000497	N/A	N/A
COG	UHGV-1489273_49	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
NCBIFam	UHGV-1489273_51	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1489273_51	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1489273_52	phrog_37604	160.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1489273_52	1232443.BAIA02000078_gene10	124.0	6.16e-34	N/A	N/A
PHROG	UHGV-1489273_53	phrog_1129	63.4	2.5e-18	holin	lysis
UniRef90	UHGV-1489273_53	UniRef90_A0A416MDZ9	139.0	3.96007e-41	Enolase	N/A
eggNOG-mapper	UHGV-1489273_53	742740.HMPREF9474_03522	121.0	6.24e-35	N/A	N/A
Pfam	UHGV-1489273_53	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1489273_53	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1489273_54	K01447	55.0	0.0000000000000016	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1489273_54	phrog_15001	124.9	7e-37	endolysin	lysis
UniRef90	UHGV-1489273_54	UniRef90_R6U0F7	259.0	0	Putative lipoprotein	N/A
eggNOG-mapper	UHGV-1489273_54	552398.HMPREF0866_01156	162.0	0	Ami_2	N/A
Pfam	UHGV-1489273_54	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1489273_54	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-1489273_56	phrog_22978	377.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1489273_56	748224.HMPREF9436_01406	318.0	0	N/A	N/A
Pfam	UHGV-1489273_56	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-1489273_56	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-1489273_57	phrog_21376	58.6	3.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-1489273_57	1408437.JNJN01000060_gene452	84.7	0.000000000000138	heme binding	N/A
Pfam	UHGV-1489273_57	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
Pfam	UHGV-1489273_57	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1489273_57	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-1489273_57	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1489273	Yes	44,397	52	83	1