vOTU vOTU-139125

vOTU: vOTU-139125

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-139125
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00748 → vOTU-139125
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205826
Biosample ID	N/A
Genome length (bp)	34,341 bps
CheckV completeness	63.27% (Medium-quality)
CDS count	58
CDS density	95.33%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	867	Host agreement	99.08
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0205826_1	1298920.KI911353_gene2663	89.0	3.84e-19	Phage portal protein, SPP1 Gp6-like	N/A
UniRef90	UHGV-0205826_2	UniRef90_R6C0B6	89.7	4.45e-19	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0205826_3	phrog_909	52.0	0.000000000000011	major head protein	head and packaging
eggNOG-mapper	UHGV-0205826_3	1298920.KI911353_gene2661	122.0	9.36e-35	N/A	N/A
PHROG	UHGV-0205826_4	phrog_29	162.9	0	major head protein	head and packaging
UniRef90	UHGV-0205826_4	UniRef90_UPI001D02C54B	680.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0205826_4	1298920.KI911353_gene2660	345.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0205826_4	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0205826_4	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0205826_5	UniRef90_A0A416G2T8	57.0	0.00000000441	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0205826_5	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0205826_6	397290.C810_01402	67.4	0.000000000000814	N/A	N/A
eggNOG-mapper	UHGV-0205826_7	1232452.BAIB02000007_gene1606	60.8	0.000000000171	N/A	N/A
PHROG	UHGV-0205826_8	phrog_443	55.4	0.0000000000000018	holin	lysis
UniRef90	UHGV-0205826_8	UniRef90_UPI000BA3B743	100.0	1.47e-26	holin	N/A
eggNOG-mapper	UHGV-0205826_8	411490.ANACAC_00704	90.9	1.48e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0205826_8	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0205826_8	PF16945	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205826_9	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0205826_10	UniRef90_UPI001BBD4500	146.0	9.97024e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0205826_10	397290.C810_01411	189.0	0	N/A	N/A
structural_annotation	UHGV-0205826_10	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205826_11	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0205826_12	UniRef90_R7BGF5	93.2	5.64e-21	Phage tail protein	N/A
structural_annotation	UHGV-0205826_12	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_13	phrog_36112	87.4	6.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0205826_13	1298920.KI911353_gene2651	113.0	8.45e-30	N/A	N/A
structural_annotation	UHGV-0205826_13	PF11836,TIGR01674	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_15	K07273	159.9	0	acm; lysozyme	N/A
PHROG	UHGV-0205826_15	phrog_291	134.2	1.3e-39	endolysin	lysis
UniRef90	UHGV-0205826_15	UniRef90_UPI001D05F2B6	308.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0205826_15	1235800.C819_00458	211.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0205826_15	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0205826_15	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0205826_15	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0205826_15	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_16	phrog_1535	152.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0205826_16	UniRef90_A0A173UHS1	287.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0205826_16	1298920.KI911353_gene2649	275.0	0	tape measure	N/A
COG	UHGV-0205826_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0205826_16	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_17	phrog_3845	44.6	0.0000000000026	N/A	unknown function
PHROG	UHGV-0205826_18	phrog_1194	52.1	0.00000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0205826_18	483218.BACPEC_01144	75.5	0.00000000000000131	N/A	N/A
Pfam	UHGV-0205826_18	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0205826_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_19	phrog_18190	91.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0205826_19	1449050.JNLE01000003_gene3879	122.0	2.75e-26	N/A	N/A
Pfam	UHGV-0205826_21	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
KOfam	UHGV-0205826_22	K18830	45.4	0.0000000000016	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0205826_22	phrog_3037	43.8	0.0000000000041	transcriptional repressor	transcription regulation
UniRef90	UHGV-0205826_22	UniRef90_A0A173RCH7	135.0	1.47e-38	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-0205826_22	411470.RUMGNA_02181	63.9	0.0000000000264	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0205826_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0205826_22	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0205826_22	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_28	K07741	72.1	1.7e-20	antB; anti-repressor protein	N/A
PHROG	UHGV-0205826_28	phrog_130	249.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0205826_28	UniRef90_A0A7C6NYG1	288.0	0	BRO family protein	N/A
eggNOG-mapper	UHGV-0205826_28	1121428.DESHY_10043___1	253.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0205826_28	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0205826_28	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0205826_28	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0205826_28	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_29	K08309	40.3	0.000000000046	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0205826_29	phrog_19890	82.9	3.8e-24	N/A	unknown function
UniRef90	UHGV-0205826_29	UniRef90_A0A352SFF8	162.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0205826_29	1410650.JHWL01000003_gene2854	138.0	5.29e-39	lytic transglycosylase activity	N/A
Pfam	UHGV-0205826_29	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0205826_29	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0205826_29	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_33	K19171	84.7	4.6e-25	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0205826_33	phrog_77	187.0	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205826_33	UniRef90_A0A8D9PGW5	504.0	0	Chromosome partition protein	N/A
eggNOG-mapper	UHGV-0205826_33	1232453.BAIF02000057_gene1134	245.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0205826_33	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0205826_33	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0205826_33	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205826_34	PF02237,MF_00257,NF037951,COG4013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205826_35	PF09629,PF08962,COG4014	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_37	phrog_2760	192.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205826_37	UniRef90_A0A412RR22	378.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0205826_37	397290.C810_01467	314.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-0205826_37	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0205826_37	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0205826_37	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0205826_37	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_38	K06940	52.8	0.0000000000000082	N/A	N/A
PHROG	UHGV-0205826_38	phrog_32498	153.3	0	N/A	unknown function
UniRef90	UHGV-0205826_38	UniRef90_A0A173SAY4	142.0	3.91999e-41	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-0205826_38	397290.C810_01479	136.0	1.33e-39	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-0205826_38	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
PHROG	UHGV-0205826_39	phrog_25456	84.0	1.1e-24	N/A	unknown function
KOfam	UHGV-0205826_40	K00953	40.0	0.000000000033	FLAD1; FAD synthetase [EC:2.7.7.2]	N/A
PHROG	UHGV-0205826_40	phrog_424	46.3	0.00000000000069	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0205826_40	UniRef90_A0A412RQP5	221.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0205826_40	1151292.QEW_4547	122.0	2.66e-31	N/A	N/A
Pfam	UHGV-0205826_40	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0205826_40	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0205826_40	PF01507,NF002537,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_41	phrog_424	57.6	7.2e-17	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0205826_41	UniRef90_A0A412RQR2	399.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0205826_41	1280696.ATVY01000096_gene1971	182.0	0	N/A	N/A
COG	UHGV-0205826_41	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0205826_42	phrog_392	56.7	5.8e-16	metal-dependent hydrolase	other
UniRef90	UHGV-0205826_42	UniRef90_R7BIJ8	109.0	2.46e-30	Putative phage-related hydrolase	N/A
eggNOG-mapper	UHGV-0205826_42	1122985.HMPREF1991_02241	80.9	6.05e-18	N/A	N/A
Pfam	UHGV-0205826_42	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-0205826_42	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
PHROG	UHGV-0205826_43	phrog_392	103.6	2.5e-30	metal-dependent hydrolase	other
UniRef90	UHGV-0205826_43	UniRef90_A0A412RQX2	320.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0205826_43	1232453.BAIF02000057_gene1138	111.0	7e-29	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-0205826_43	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0205826_43	PF02112,MF_00457,NF041851,COG2220	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0205826_44	1235793.C809_02210	63.2	0.0000000000641	N/A	N/A
structural_annotation	UHGV-0205826_44	PF18597	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_45	phrog_2118	120.2	1.8e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205826_45	UniRef90_R5ZJF1	225.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0205826_45	610130.Closa_0730	129.0	6.81e-37	HNH endonuclease	N/A
Pfam	UHGV-0205826_45	PF14279	N/A	N/A	HNH endonuclease	HNH_5
COG	UHGV-0205826_45	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0205826_45	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_48	phrog_8684	73.7	2e-21	N/A	unknown function
UniRef90	UHGV-0205826_48	UniRef90_UPI000E50DC0C	190.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0205826_48	742735.HMPREF9467_00920	62.0	0.000000000228	YopX protein	N/A
Pfam	UHGV-0205826_48	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0205826_48	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0205826_48	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_49	phrog_874	182.3	0	N/A	unknown function
UniRef90	UHGV-0205826_49	UniRef90_UPI0018F57B3A	220.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0205826_49	411468.CLOSCI_00298	193.0	0	N/A	N/A
structural_annotation	UHGV-0205826_49	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_50	phrog_10714	51.0	0.000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-0205826_50	1120998.AUFC01000030_gene2222	53.5	0.0000000328	N/A	N/A
eggNOG-mapper	UHGV-0205826_53	397291.C804_00971	57.4	0.00000000531	N/A	N/A
structural_annotation	UHGV-0205826_53	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0205826_54	phrog_19106	282.5	0	N/A	unknown function
UniRef90	UHGV-0205826_54	UniRef90_A0A412RQV5	349.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0205826_54	658655.HMPREF0988_00875	219.0	0	N/A	N/A
structural_annotation	UHGV-0205826_54	TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_55	K00558	130.9	7.4e-39	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0205826_55	phrog_116	141.5	3.99931e-42	DNA methyltransferase	other
UniRef90	UHGV-0205826_55	UniRef90_A0A412KF70	500.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0205826_55	397290.C810_05213	320.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0205826_55	MTase_II_00058	152.9	4.2039e-45	Type II methyltransferase	RM
Pfam	UHGV-0205826_55	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0205826_55	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0205826_55	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0205826_55	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0205826_57	K00558	40.7	0.000000000019	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0205826_57	phrog_16427	86.6	2.4e-25	DNA methyltransferase	other
UniRef90	UHGV-0205826_57	UniRef90_A0A412KFA2	309.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0205826_57	1121115.AXVN01000007_gene3542	148.0	1.28e-38	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0205826_57	MTase_II_00174	50.9	0.0000000000000084	Type II methyltransferase	RM
Pfam	UHGV-0205826_57	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0205826_57	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0205826_58	phrog_5708	226.3	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205826_58	UniRef90_UPI001BB8B78A	218.0	0	Phage replication initiation protein	N/A
eggNOG-mapper	UHGV-0205826_58	1415774.U728_867	181.0	0	DnaD domain protein	N/A
COG	UHGV-0205826_58	COG3935	N/A	N/A	DNA replication protein DnaD	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0205826	Yes	34,341	40	63	1