vOTU vOTU-139244

vOTU: vOTU-139244

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-139244
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vOTU-139244
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0190945
Biosample ID	N/A
Genome length (bp)	23,557 bps
CheckV completeness	56.26% (Medium-quality)
CDS count	44
CDS density	90.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	202	Host agreement	85.15
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	13	Host agreement	92.31

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 56.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0190945_1	phrog_156	70.8	1.6e-20	portal protein	head and packaging
eggNOG-mapper	UHGV-0190945_1	1410650.JHWL01000003_gene2833	181.0	0	N/A	N/A
PHROG	UHGV-0190945_3	phrog_37329	49.3	0.000000000000052	N/A	unknown function
Pfam	UHGV-0190945_3	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0190945_3	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0190945_3	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0190945_4	537007.BLAHAN_05255	59.3	0.00000131	N/A	N/A
PHROG	UHGV-0190945_5	phrog_511	237.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0190945_5	1410650.JHWL01000003_gene2827	321.0	0	N/A	N/A
structural_annotation	UHGV-0190945_5	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0190945_6	K06909	145.8	3.79752e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0190945_6	phrog_979	132.5	1.90001e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0190945_6	UniRef90_A0A810Q5R0	640.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0190945_6	1410650.JHWL01000003_gene2834	635.0	0	N/A	N/A
Pfam	UHGV-0190945_6	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0190945_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0190945_6	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_7	phrog_606	72.3	7.6e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0190945_7	UniRef90_UPI001F487344	126.0	1.38e-34	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0190945_7	397290.C810_05185	129.0	3.49e-36	DNA-packaging protein gp3	N/A
Pfam	UHGV-0190945_7	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0190945_7	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_8	phrog_3584	114.1	1.1e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0190945_8	537013.CLOSTMETH_02141	70.1	0.00000000000651	N/A	N/A
structural_annotation	UHGV-0190945_8	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_9	phrog_2245	83.4	2.5e-24	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0190945_9	UniRef90_A0A4U9RLZ8	67.0	0.0000000000152	N/A	N/A
eggNOG-mapper	UHGV-0190945_9	1567010.A0A0A7RU90_9VIRU	65.1	0.0000000000402	protein disulfide oxidoreductase activity	N/A
structural_annotation	UHGV-0190945_9	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_11	phrog_374	50.7	0.000000000000034	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0190945_11	387344.LVIS_0713	66.6	0.00000000000729	N/A	N/A
PHROG	UHGV-0190945_13	phrog_190	104.5	9.8e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0190945_13	UniRef90_UPI0006C2AC63	127.0	9.25e-35	N/A	N/A
eggNOG-mapper	UHGV-0190945_13	1226322.HMPREF1545_00295	117.0	2.86e-31	N/A	N/A
Pfam	UHGV-0190945_13	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0190945_13	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_15	phrog_38832	88.3	4.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0190945_15	1232443.BAIA02000078_gene48	113.0	1.72e-30	N/A	N/A
structural_annotation	UHGV-0190945_15	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_16	phrog_3136	141.3	2.49992e-42	N/A	unknown function
UniRef90	UHGV-0190945_16	UniRef90_A0A329TS47	164.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0190945_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0190945_16	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0190945_18	K00390	106.5	2.6e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0190945_18	phrog_424	119.4	2.8e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0190945_18	UniRef90_UPI001D087498	430.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0190945_18	1408437.JNJN01000032_gene2312	345.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0190945_18	BrxP_00001	69.4	2.8e-20	BrxP	BREX
Pfam	UHGV-0190945_18	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0190945_18	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0190945_18	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0190945_19	K00558	45.8	0.00000000000047	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0190945_19	phrog_757	133.4	1.1e-39	DNA methyltransferase	other
UniRef90	UHGV-0190945_19	UniRef90_A0A1C5WFL3	405.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0190945_19	622312.ROSEINA2194_01264	382.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0190945_19	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0190945_19	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0190945_19	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0190945_23	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0190945_24	NF041247	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_26	phrog_1468	59.6	2.3e-17	transcriptional repressor	transcription regulation
UniRef90	UHGV-0190945_26	UniRef90_A0A1Y3XM81	57.0	0.00000000266	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-0190945_27	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-0190945_32	K22300	58.3	1.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0190945_32	phrog_8	49.0	0.00000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0190945_32	UniRef90_A0A844DFR0	118.0	7.74e-32	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0190945_32	748224.HMPREF9436_01444	115.0	4.12e-31	N/A	N/A
Pfam	UHGV-0190945_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0190945_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0190945_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0190945_33	857571.EA1_08492	58.9	0.000000137	N/A	N/A
Pfam	UHGV-0190945_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0190945_35	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0190945_35	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0190945_36	K14059	208.5	0	int; integrase	N/A
PHROG	UHGV-0190945_36	phrog_1	197.7	0	integrase	integration and excision
UniRef90	UHGV-0190945_36	UniRef90_A0A212JT52	255.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-0190945_36	1507.HMPREF0262_00307	201.0	0	Phage integrase family	N/A
Pfam	UHGV-0190945_36	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0190945_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0190945_36	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0190945_36	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0190945_37	UniRef90_A0A8F0WD75	80.5	7.5e-16	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0190945_37	1378168.N510_03079	71.6	0.000000000000794	N/A	N/A
eggNOG-mapper	UHGV-0190945_41	1160721.RBI_I00206	52.0	0.0000000396	N/A	N/A
structural_annotation	UHGV-0190945_41	PF10723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0190945_42	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0190945_43	phrog_14030	141.8	3.89981e-42	N/A	unknown function
UniRef90	UHGV-0190945_43	UniRef90_R6LL81	243.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0190945_43	1121866.AUGK01000003_gene1444	97.4	1.65e-20	amidase activity	N/A
COG	UHGV-0190945_43	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0190945_44	phrog_6918	44.1	0.0000000000031	holin	lysis
eggNOG-mapper	UHGV-0190945_44	1297617.JPJD01000020_gene301	52.4	0.0000000471	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0190945_44	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0190945	Yes	23,557	58	56	1