vOTU vOTU-140825

vOTU: vOTU-140825

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-140825
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00332 → vGENUS-00239 → vOTU-140825
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1459985
Biosample ID	N/A
Genome length (bp)	34,675 bps
CheckV completeness	78.88% (Medium-quality)
CDS count	53
CDS density	89.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola	Total connections	95	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1459985_2	phrog_991	57.0	2.6e-16	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1459985_2	1160721.RBI_II00528	171.0	6.3703e-42	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1459985_2	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
PHROG	UHGV-1459985_3	phrog_18646	56.5	4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1459985_3	1121936.AUHI01000017_gene750	49.3	0.00000877	N/A	N/A
PHROG	UHGV-1459985_4	phrog_885	125.5	2.7e-37	major tail protein	tail
UniRef90	UHGV-1459985_4	UniRef90_A0A101Y2E4	123.0	1.22e-30	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1459985_4	411465.PEPMIC_00741	143.0	2.21999e-40	N/A	N/A
structural_annotation	UHGV-1459985_4	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_5	phrog_17405	43.4	0.0000000000053	head protein	head and packaging
UniRef90	UHGV-1459985_5	UniRef90_A0A415JI88	61.2	0.00000000135	N/A	N/A
structural_annotation	UHGV-1459985_5	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_6	phrog_17977	78.5	6.2e-23	N/A	unknown function
UniRef90	UHGV-1459985_6	UniRef90_UPI00141211AB	146.0	2.66247e-43	head-tail adaptor protein	N/A
Pfam	UHGV-1459985_6	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1459985_6	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_8	phrog_29	132.9	2.6e-39	major head protein	head and packaging
UniRef90	UHGV-1459985_8	UniRef90_K1TJK6	408.0	0	Phage protein (Fragment)	N/A
eggNOG-mapper	UHGV-1459985_8	1232443.BAIA02000078_gene29	250.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1459985_8	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1459985_8	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_9	phrog_909	82.6	3.7e-24	major head protein	head and packaging
UniRef90	UHGV-1459985_9	UniRef90_K1TUL5	127.0	8.31e-36	N/A	N/A
eggNOG-mapper	UHGV-1459985_9	1497679.EP56_02915	65.5	0.0000000000031	N/A	N/A
Pfam	UHGV-1459985_9	PF02924	N/A	N/A	Bacteriophage lambda head decoration protein D	HDPD
structural_annotation	UHGV-1459985_9	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_10	phrog_194	50.7	0.000000000000034	head scaffolding protein	head and packaging
UniRef90	UHGV-1459985_10	UniRef90_A0A174AAF6	87.8	2.7e-18	Clp R domain-containing protein	N/A
eggNOG-mapper	UHGV-1459985_10	768486.EHR_02625	52.8	0.0000058	Phage minor structural protein GP20	N/A
structural_annotation	UHGV-1459985_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_12	phrog_595	113.4	2.4e-33	head maturation protease	head and packaging
UniRef90	UHGV-1459985_12	UniRef90_A0A3A9EHQ6	270.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1459985_12	1504822.CCNO01000013_gene286	174.0	0	cell adhesion	N/A
Pfam	UHGV-1459985_12	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1459985_12	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1459985_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459985_12	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_13	phrog_56	52.7	2.8e-24	DNA methyltransferase	other
UniRef90	UHGV-1459985_13	UniRef90_UPI00164C574E	351.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1459985_13	1236504.HMPREF2132_01695	144.0	3.29e-37	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1459985_13	MTase_II_00075	64.5	1e-24	Type II methyltransferase	RM
Pfam	UHGV-1459985_13	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-1459985_13	PF02086,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_14	phrog_64	177.6	0	portal protein	head and packaging
UniRef90	UHGV-1459985_14	UniRef90_A0A285PU84	404.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1459985_14	673376.F2VHW1_9CAUD	189.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1459985_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1459985_14	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_15	K06909	122.7	3.6e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1459985_15	phrog_10250	143.8	8.09951e-43	N/A	unknown function
UniRef90	UHGV-1459985_15	UniRef90_UPI0018A99FCF	502.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1459985_15	476272.RUMHYD_01756	396.0	0	N/A	N/A
Pfam	UHGV-1459985_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1459985_15	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1459985_15	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1459985_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1459985_15	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459985_16	PF07141,NF012144	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1459985_17	446462.Amir_3266	58.9	0.00000000267	N/A	N/A
PHROG	UHGV-1459985_18	phrog_2302	102.3	3.2e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1459985_18	UniRef90_A0A417HAM3	372.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1459985_18	358220.C380_09765	223.0	0	sulfate reduction	N/A
COG	UHGV-1459985_18	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1459985_18	PF01507,MF_00345,NF006351,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459985_19	UniRef90_W1I5S7	50.8	0.000000563	Uncultured bacterium extrachromosomal DNA RGI00099	N/A
structural_annotation	UHGV-1459985_19	PF10723,NF010256,COG4877	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459985_21	PF07374,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459985_24	TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_25	K17080	152.5	2.8026e-45	PHB1; prohibitin 1	N/A
PHROG	UHGV-1459985_25	phrog_200	150.5	4.2039e-45	lipoprotein	other
UniRef90	UHGV-1459985_25	UniRef90_A0A2V2D8I0	176.0	0	Membrane protease	N/A
eggNOG-mapper	UHGV-1459985_25	1216932.CM240_0886	132.0	3.41e-34	prohibitin homologues	N/A
Pfam	UHGV-1459985_25	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-1459985_25	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-1459985_25	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_28	phrog_11947	57.0	2.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-1459985_28	272134.KB731324_gene2120	54.7	0.000000104	N/A	N/A
UniRef90	UHGV-1459985_29	UniRef90_F2F2I1	55.8	0.00000575	Predicted ATPase	N/A
PHROG	UHGV-1459985_32	phrog_3301	43.1	0.0000000000011	pyrophosphatase	other
UniRef90	UHGV-1459985_32	UniRef90_UPI00054386A4	75.9	0.00000000000000272	nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1459985_32	743719.PaelaDRAFT_2380	54.7	0.0000000813	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1459985_32	PF12643	N/A	N/A	MazG-like family	MazG-like
COG	UHGV-1459985_32	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1459985_32	COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_33	phrog_111	157.6	0	DNA methyltransferase	other
UniRef90	UHGV-1459985_33	UniRef90_A0A1G8EL36	216.0	0	Site-specific DNA-methyltransferase (Adenine-specific)	N/A
eggNOG-mapper	UHGV-1459985_33	411468.CLOSCI_00567	202.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-1459985_33	oMTase_00015	212.2	0	orphan methyltransferase	RM
Pfam	UHGV-1459985_33	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-1459985_33	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_34	K03111	168.6	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1459985_34	phrog_44	161.2	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459985_34	UniRef90_A0A1Q6Q4S4	197.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1459985_34	1321781.HMPREF1985_01487	136.0	3.8e-39	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1459985_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1459985_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1459985_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1459985_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1459985_34	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_36	phrog_824	147.9	2.8026e-44	N/A	unknown function
UniRef90	UHGV-1459985_36	UniRef90_UPI00189BCDD7	155.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1459985_36	767434.Fraau_0982	130.0	2.57e-37	VRR-NUC domain	N/A
Pfam	UHGV-1459985_36	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1459985_37	K07741	86.5	7e-25	antB; anti-repressor protein	N/A
PHROG	UHGV-1459985_37	phrog_130	222.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1459985_37	UniRef90_UPI0010262014	244.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1459985_37	1582156.A0A0A8WIG2_9CAUD	238.0	0	DNA binding	N/A
Pfam	UHGV-1459985_37	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1459985_37	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-1459985_37	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_38	K02314	283.1	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1459985_38	phrog_19	266.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459985_38	UniRef90_A0A2D5NHA5	186.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-1459985_38	1122175.ATXU01000007_gene22	176.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1459985_38	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1459985_38	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1459985_38	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1459985_38	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
Pfam	UHGV-1459985_39	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1459985_39	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_40	K07455	178.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1459985_40	phrog_148	179.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459985_40	UniRef90_A0A7X7Z0P1	310.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1459985_40	1158602.I590_02957	188.0	0	RecT family	N/A
Pfam	UHGV-1459985_40	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1459985_40	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1459985_40	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1459985_40	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_41	phrog_434	291.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459985_41	UniRef90_A0A7C6PS99	239.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1459985_41	997296.PB1_16439	228.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-1459985_41	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1459985_41	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1459985_41	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1459985_41	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459985_44	PF20432,MF_00535,NF040507,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_45	K07729	65.1	1.5e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1459985_45	phrog_3	46.6	0.0000000000014	transcriptional repressor	transcription regulation
UniRef90	UHGV-1459985_45	UniRef90_A0A3M1YWL0	53.1	0.000000265	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1459985_45	1121931.AUHG01000003_gene900	51.2	0.000000805	N/A	N/A
Pfam	UHGV-1459985_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1459985_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1459985_45	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1459985_46	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
structural_annotation	UHGV-1459985_46	PF18341,NF040678,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-1459985_49	K14059	135.4	7e-40	int; integrase	N/A
PHROG	UHGV-1459985_49	phrog_1	123.2	2.6e-36	integrase	integration and excision
UniRef90	UHGV-1459985_49	UniRef90_UPI0005D1DBC9	143.0	7.34e-36	site-specific integrase	N/A
eggNOG-mapper	UHGV-1459985_49	1514668.JOOA01000001_gene242	143.0	1.23e-36	Phage integrase family	N/A
Pfam	UHGV-1459985_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1459985_49	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1459985_49	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_51	phrog_28802	54.8	0.0000000000000011	N/A	unknown function
structural_annotation	UHGV-1459985_51	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_52	phrog_20016	203.0	0	N/A	unknown function
UniRef90	UHGV-1459985_52	UniRef90_A0A285PT46	202.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1459985_52	397290.C810_05214	191.0	0	N/A	N/A
structural_annotation	UHGV-1459985_52	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1459985_53	phrog_16490	217.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1459985_53	1408437.JNJN01000043_gene803	194.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1459985	Yes	34,675	53	79	1