vOTU vOTU-141212

vOTU: vOTU-141212

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-141212
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00135 → vGENUS-00234 → vOTU-141212
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1377257
Biosample ID	SAMEA2580160
Genome length (bp)	23,518 bps
CheckV completeness	52.87% (Medium-quality)
CDS count	31
CDS density	92.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	302	Host agreement	96.69
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	16	Host agreement	81.25

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1377257_1	411471.SUBVAR_06929	165.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1377257_1	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
UniRef90	UHGV-1377257_2	UniRef90_UPI001C1090AB	103.0	6.99e-24	collagen-like protein	N/A
eggNOG-mapper	UHGV-1377257_2	1297617.JPJD01000099_gene2171	106.0	4.31e-24	Collagen triple helix repeat protein	N/A
COG	UHGV-1377257_2	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-1377257_2	PF10651,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_4	phrog_32744	663.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1377257_4	1120998.AUFC01000030_gene2247	266.0	0	N/A	N/A
structural_annotation	UHGV-1377257_4	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_5	phrog_1194	63.4	3.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1377257_5	1226322.HMPREF1545_00060	235.0	0	N/A	N/A
structural_annotation	UHGV-1377257_5	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_6	phrog_1535	102.5	4.8e-32	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1377257_6	693746.OBV_18190	434.0	0	domain protein	N/A
COG	UHGV-1377257_6	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1377257_6	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_7	phrog_8545	47.5	0.00000000000026	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1377257_7	UniRef90_UPI001D05CE4F	75.1	0.000000000000751	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-1377257_7	1203606.HMPREF1526_01637	69.3	0.0000000000144	tRNA_anti-like	N/A
Pfam	UHGV-1377257_7	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
PHROG	UHGV-1377257_8	phrog_706	90.0	2.4e-26	N/A	unknown function
UniRef90	UHGV-1377257_8	UniRef90_UPI001D069FB9	387.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1377257_8	693746.OBV_18170	192.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1377257_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1377257_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_9	phrog_11299	87.3	1.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1377257_9	693746.OBV_18160	196.0	0	N/A	N/A
structural_annotation	UHGV-1377257_9	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_10	phrog_3099	90.2	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1377257_10	1232443.BAIA02000078_gene23	317.0	0	N/A	N/A
structural_annotation	UHGV-1377257_10	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_11	phrog_3266	55.9	6.8e-16	tail completion	connector
UniRef90	UHGV-1377257_11	UniRef90_A0A2Z4QA01	109.0	4.66e-28	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1377257_11	1232443.BAIA02000078_gene24	248.0	0	N/A	N/A
structural_annotation	UHGV-1377257_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_12	phrog_556	70.4	2.2e-20	minor head protein	head and packaging
UniRef90	UHGV-1377257_12	UniRef90_UPI00195E1497	258.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1377257_12	1226322.HMPREF1545_00054	178.0	0	Minor capsid protein	N/A
Pfam	UHGV-1377257_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1377257_12	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_13	phrog_3366	111.8	4.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-1377257_13	1226322.HMPREF1545_00053	204.0	0	N/A	N/A
structural_annotation	UHGV-1377257_13	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_14	phrog_541	110.2	1.1e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-1377257_14	1120998.AUFC01000030_gene2237	60.1	0.0000000012	N/A	N/A
eggNOG-mapper	UHGV-1377257_15	1226322.HMPREF1545_00051	208.0	0	N/A	N/A
PHROG	UHGV-1377257_16	phrog_10	177.6	0	major head protein	head and packaging
UniRef90	UHGV-1377257_16	UniRef90_U2SBS0	630.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-1377257_16	1226322.HMPREF1545_00050	630.0	0	Phage capsid family	N/A
Pfam	UHGV-1377257_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1377257_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1377257_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1377257_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_17	phrog_2303	62.4	8.3e-18	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1377257_17	1226322.HMPREF1545_00049	265.0	0	N/A	N/A
PHROG	UHGV-1377257_19	phrog_581	275.6	0	minor head protein	head and packaging
UniRef90	UHGV-1377257_19	UniRef90_UPI001D080D49	937.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1377257_19	1226322.HMPREF1545_00046	399.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1377257_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1377257_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1377257_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_20	phrog_533	408.6	0	portal protein	head and packaging
UniRef90	UHGV-1377257_20	UniRef90_UPI001D078D46	922.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1377257_20	1226322.HMPREF1545_00044	778.0	0	N/A	N/A
Pfam	UHGV-1377257_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1377257_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1377257_21	K06909	388.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1377257_21	phrog_5653	163.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1377257_21	UniRef90_A0A2U1BEH4	812.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1377257_21	33035.JPJF01000106_gene3136	466.0	0	Terminase small subunit	N/A
Pfam	UHGV-1377257_21	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1377257_21	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1377257_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1377257_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1377257_21	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1377257_22	K07474	127.5	1.9e-37	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1377257_22	phrog_51	113.9	8e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1377257_22	UniRef90_UPI001A9B7F3C	214.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1377257_22	665942.HMPREF1022_02667	103.0	2.79e-26	PFAM Terminase small subunit	N/A
Pfam	UHGV-1377257_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1377257_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1377257_22	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_24	phrog_8680	218.7	0	N/A	unknown function
UniRef90	UHGV-1377257_24	UniRef90_UPI00189ACAD3	460.0	0	N/A	N/A
eggNOG-mapper	UHGV-1377257_24	411470.RUMGNA_02208	209.0	0	N/A	N/A
Pfam	UHGV-1377257_24	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1377257_24	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_25	phrog_130	176.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1377257_25	UniRef90_A0A1V0QCE9	380.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1377257_25	706434.HMPREF9429_01141	190.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1377257_25	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1377257_25	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1377257_25	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-1377257_27	K22300	49.7	0.000000000000058	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1377257_27	UniRef90_U2R0P8	294.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1377257_27	1226322.HMPREF1545_02890	294.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1377257_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1377257_27	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1377257_28	K00571	172.6	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1377257_28	phrog_67	189.6	0	DNA methyltransferase	other
UniRef90	UHGV-1377257_28	UniRef90_A0A0K1LJA3	287.0	0	DNA methylase	N/A
eggNOG-mapper	UHGV-1377257_28	1327981.R9ZYG2_9CAUD	238.0	0	helicase activity	N/A
PADLOC	UHGV-1377257_28	MTase_II_00157	120.9	5.3e-38	Type II methyltransferase	RM
Pfam	UHGV-1377257_28	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1377257_28	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1377257_31	phrog_38832	43.4	0.0000000000033	N/A	unknown function
eggNOG-mapper	UHGV-1377257_31	665956.HMPREF1032_03087	85.1	1.08e-19	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1377257	Yes	23,518	49	53	1
UHGV-1462432	No	22,608	49	51	1