vOTU vOTU-141407

vOTU: vOTU-141407

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-141407
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00096 → vGENUS-06550 → vOTU-141407
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0158145
Biosample ID	N/A
Genome length (bp)	27,056 bps
CheckV completeness	70.31% (Medium-quality)
CDS count	41
CDS density	95.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	21	Host agreement	95.24
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0158145_2	phrog_4757	42.0	0.0000000000039	N/A	unknown function
PHROG	UHGV-0158145_3	phrog_6487	142.8	9.80909e-45	N/A	unknown function
UniRef90	UHGV-0158145_3	UniRef90_A0A0U0KNR2	132.0	1.16e-36	N/A	N/A
eggNOG-mapper	UHGV-0158145_3	999425.HMPREF9186_02053	159.0	0	N/A	N/A
structural_annotation	UHGV-0158145_3	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_4	phrog_1309	272.1	0	endolysin	lysis
UniRef90	UHGV-0158145_4	UniRef90_UPI001BE8F071	466.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0158145_4	999425.HMPREF9186_02052	459.0	0	Bacterial SH3 domain	N/A
Pfam	UHGV-0158145_4	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0158145_4	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-0158145_4	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-0158145_4	PF08460,PF05257,NF041850,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_5	phrog_10091	77.5	1.6e-22	holin	lysis
UniRef90	UHGV-0158145_5	UniRef90_A0A4D6B4F0	167.0	0	Holin	N/A
eggNOG-mapper	UHGV-0158145_5	999425.HMPREF9186_02051	168.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0158145_5	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0158145_5	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0158145_5	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0158145_5	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_6	phrog_1296	90.0	1.4e-26	holin	lysis
UniRef90	UHGV-0158145_6	UniRef90_A0A0M9FH77	98.2	7.42e-25	Phage membrane protein	N/A
PHROG	UHGV-0158145_7	phrog_1554	182.6	0	N/A	unknown function
UniRef90	UHGV-0158145_7	UniRef90_A0A359YI08	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158145_7	1005705.HMPREF9967_1055	256.0	0	N/A	N/A
structural_annotation	UHGV-0158145_7	PF07104	N/A	N/A	N/A	N/A
UniRef90	UHGV-0158145_8	UniRef90_F5W039	58.2	0.000000000491	Conserved domain protein	N/A
PHROG	UHGV-0158145_9	phrog_2270	279.3	0	N/A	unknown function
UniRef90	UHGV-0158145_9	UniRef90_UPI0018978324	1271.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0158145_9	537874.B3GW15_9CAUD	660.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0158145_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0158145_9	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-0158145_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0158145_9	PF14594,PF07902,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_10	phrog_33	77.2	3.8e-22	distal tail protein Dit	tail
UniRef90	UHGV-0158145_10	UniRef90_A0A1F0ZPE5	454.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0158145_10	537874.B3GW14_9CAUD	278.0	0	Phage tail protein	N/A
Pfam	UHGV-0158145_10	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0158145_10	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-0158145_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0158145_11	K20282	46.1	0.00000000000015	GCC2; GRIP and coiled-coil domain-containing protein 2	N/A
PHROG	UHGV-0158145_11	phrog_1686	789.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0158145_11	UniRef90_A0A1F0AUB7	1243.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0158145_11	537874.B3GW13_9CAUD	731.0	0	N/A	N/A
Pfam	UHGV-0158145_11	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0158145_11	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-0158145_11	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_12	phrog_706	180.8	0	N/A	unknown function
UniRef90	UHGV-0158145_12	UniRef90_UPI001CBECD66	247.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0158145_12	537874.B3GW12_9CAUD	261.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0158145_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0158145_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_13	phrog_1061	97.0	1.6e-28	N/A	unknown function
UniRef90	UHGV-0158145_13	UniRef90_A0A380KJJ3	90.9	2.19e-20	N/A	N/A
eggNOG-mapper	UHGV-0158145_13	537874.B3GW11_9CAUD	163.0	0	N/A	N/A
structural_annotation	UHGV-0158145_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_14	phrog_820	174.4	0	major tail protein	tail
UniRef90	UHGV-0158145_14	UniRef90_UPI0012BD2CD1	291.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0158145_14	537874.B3GW10_9CAUD	229.0	0	N/A	N/A
structural_annotation	UHGV-0158145_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_15	phrog_913	139.9	7.79963e-42	minor head protein	head and packaging
UniRef90	UHGV-0158145_15	UniRef90_UPI0012BB7B63	265.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0158145_15	1121871.AUAT01000035_gene1282	142.0	1.12006e-41	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-0158145_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0158145_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_16	phrog_556	80.7	1.5e-23	minor head protein	head and packaging
UniRef90	UHGV-0158145_16	UniRef90_UPI0012BC2934	228.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0158145_16	537874.B3GW08_9CAUD	143.0	7.42688e-43	Minor capsid protein	N/A
Pfam	UHGV-0158145_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0158145_16	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_17	phrog_793	85.8	3.7e-25	head-tail adaptor	connector
UniRef90	UHGV-0158145_17	UniRef90_UPI001BE5FBE4	232.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0158145_17	52979.O03932_9CAUD	57.0	0.00000000722	Minor capsid protein	N/A
Pfam	UHGV-0158145_17	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-0158145_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_18	phrog_541	104.9	5.7e-31	head-tail adaptor	connector
UniRef90	UHGV-0158145_18	UniRef90_A0A3S4LW47	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158145_18	646413.C5IUJ7_9CAUD	158.0	0	N/A	N/A
PHROG	UHGV-0158145_19	phrog_2910	48.4	0.00000000000017	N/A	unknown function
PHROG	UHGV-0158145_20	phrog_840	418.0	0	major head protein	head and packaging
UniRef90	UHGV-0158145_20	UniRef90_UPI001BEAC940	558.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0158145_20	1277892.M1I9U6_9CAUD	427.0	0	N/A	N/A
structural_annotation	UHGV-0158145_20	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_21	phrog_2303	151.4	5.60519e-45	head scaffolding protein	head and packaging
UniRef90	UHGV-0158145_21	UniRef90_A0A150NS01	142.0	1.24e-39	N/A	N/A
eggNOG-mapper	UHGV-0158145_21	537874.B3GW02_9CAUD	141.0	8.57001e-40	N/A	N/A
PHROG	UHGV-0158145_22	phrog_11077	178.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0158145_22	655813.HMPREF8579_0490	164.0	0	N/A	N/A
PHROG	UHGV-0158145_23	phrog_581	386.9	0	minor head protein	head and packaging
UniRef90	UHGV-0158145_23	UniRef90_A0A428GXI8	767.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0158145_23	1214217.ALNF01000014_gene1380	579.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0158145_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-0158145_23	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_24	phrog_533	582.1	0	portal protein	head and packaging
UniRef90	UHGV-0158145_24	UniRef90_UPI001BE74F17	926.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0158145_24	537874.B3GW00_9CAUD	686.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0158145_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0158145_24	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0158145_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0158145_25	K06909	272.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0158145_25	phrog_3717	163.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0158145_25	UniRef90_UPI0012BD7EF5	860.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0158145_25	1121871.AUAT01000040_gene913	639.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0158145_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0158145_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0158145_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0158145_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0158145_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0158145_26	K07474	95.5	1.1e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0158145_26	phrog_51	115.8	3.8e-34	terminase small subunit	head and packaging
UniRef90	UHGV-0158145_26	UniRef90_UPI0012BCB454	279.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0158145_26	1054460.SPPN_00130	152.0	4.2039e-45	DNA packaging	N/A
Pfam	UHGV-0158145_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0158145_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0158145_26	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_27	phrog_36	81.4	1.4e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0158145_27	UniRef90_A0A6I3PYK9	238.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158145_27	936580.HMPREF1516_0728	84.7	3.81e-19	sigma factor activity	N/A
Pfam	UHGV-0158145_27	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0158145_27	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0158145_27	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_31	phrog_4252	64.6	6.6e-19	N/A	unknown function
UniRef90	UHGV-0158145_31	UniRef90_UPI001BE723C0	107.0	3.07e-28	YopX family protein	N/A
PHROG	UHGV-0158145_32	phrog_121	132.3	2.8e-39	N/A	unknown function
UniRef90	UHGV-0158145_32	UniRef90_A0A414PKF4	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158145_32	1095737.HMPREF1110_1213	136.0	2.13e-38	N/A	N/A
Pfam	UHGV-0158145_32	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-0158145_32	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_33	phrog_4455	94.4	7.1e-28	N/A	unknown function
PHROG	UHGV-0158145_35	phrog_1691	130.0	6.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0158145_35	226185.EF_0327	67.0	0.000000000000399	N/A	N/A
KOfam	UHGV-0158145_36	K22300	42.4	0.000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0158145_36	phrog_8	56.7	5.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0158145_36	UniRef90_A0A6Z6W8Z8	330.0	0	XRE family transcriptional regulator	N/A
Pfam	UHGV-0158145_36	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0158145_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0158145_36	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_38	phrog_3745	98.6	2.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0158145_38	1423734.JCM14202_3068	51.6	0.0000000793	N/A	N/A
KOfam	UHGV-0158145_39	K01160	51.3	0.000000000000033	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0158145_39	phrog_140	112.1	4.8e-33	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158145_39	UniRef90_I2NHS8	289.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0158145_39	1000588.HMPREF9965_1714	221.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0158145_39	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0158145_39	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0158145_39	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0158145_40	phrog_16687	102.2	2.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0158145_40	1214217.ALNF01000014_gene1395	89.4	1.13e-22	N/A	N/A
KOfam	UHGV-0158145_41	K07505	41.8	0.000000000015	repA; regulatory protein RepA	N/A
PHROG	UHGV-0158145_41	phrog_2597	150.3	1.54143e-44	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158145_41	UniRef90_A0A359YIC2	165.0	0	Phage replicative DNA helicase, repA	N/A
eggNOG-mapper	UHGV-0158145_41	1403946.Q615_SPAC00127G0151	222.0	0	Primase C terminal 2 (PriCT-2)	N/A
COG	UHGV-0158145_41	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0158145_41	PF04703,TIGR04472,COG1846	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0158145	Yes	27,056	42	70	1