vOTU vOTU-141703

vOTU: vOTU-141703

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-141703
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00337 → vGENUS-02465 → vOTU-141703
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1460665
Biosample ID	N/A
Genome length (bp)	21,290 bps
CheckV completeness	54.65% (Medium-quality)
CDS count	25
CDS density	94.88%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	21	Host agreement	95.24
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus parasanguinis_B	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.65)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1460665_1	K04763	102.4	5.9e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1460665_1	phrog_216	152.6	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-1460665_1	UniRef90_A0A4D6AD72	311.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1460665_1	999425.HMPREF9186_02028	312.0	0	Phage integrase family	N/A
Pfam	UHGV-1460665_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1460665_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1460665_1	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_2	phrog_2343	139.3	6.19934e-42	terminase small subunit	head and packaging
UniRef90	UHGV-1460665_2	UniRef90_A0A5C5TE72	89.4	7.81e-21	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1460665_2	999425.HMPREF9186_02030	218.0	0	N/A	N/A
structural_annotation	UHGV-1460665_2	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_3	phrog_9	281.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1460665_3	UniRef90_X8K5U6	984.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1460665_3	999425.HMPREF9186_02031	1087.0	0	Terminase	N/A
Pfam	UHGV-1460665_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1460665_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1460665_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1460665_3	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_4	phrog_903	65.5	3.7e-19	N/A	unknown function
PHROG	UHGV-1460665_5	phrog_12	150.1	1.26117e-44	portal protein	head and packaging
UniRef90	UHGV-1460665_5	UniRef90_A0A4D6B0L6	745.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1460665_5	999425.HMPREF9186_02033	747.0	0	portal protein	N/A
Pfam	UHGV-1460665_5	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1460665_5	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1460665_5	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1460665_5	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1460665_6	K01358	128.9	4.8e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1460665_6	phrog_94	236.6	0	head maturation protease	head and packaging
UniRef90	UHGV-1460665_6	UniRef90_A0A428HZ00	474.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1460665_6	999425.HMPREF9186_02034	486.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1460665_6	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1460665_6	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1460665_6	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_7	phrog_10	130.0	2.4e-38	major head protein	head and packaging
UniRef90	UHGV-1460665_7	UniRef90_A0A4D6B0J4	702.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1460665_7	999425.HMPREF9186_02035	677.0	0	Phage capsid family	N/A
Pfam	UHGV-1460665_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1460665_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1460665_7	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1460665_7	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_8	phrog_749	101.3	4.5e-30	N/A	unknown function
UniRef90	UHGV-1460665_8	UniRef90_A0A8B1YLI6	157.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1460665_8	999425.HMPREF9186_02036	187.0	0	N/A	N/A
structural_annotation	UHGV-1460665_8	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_9	phrog_933	56.1	5.3e-16	N/A	unknown function
PHROG	UHGV-1460665_10	phrog_25	44.6	0.0000000000022	head closure Hc1	connector
UniRef90	UHGV-1460665_10	UniRef90_A0A8B1YLH5	228.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1460665_10	999425.HMPREF9186_02038	252.0	0	N/A	N/A
structural_annotation	UHGV-1460665_10	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_11	phrog_5	43.6	0.0000000000068	tail completion or Neck1 protein	connector
UniRef90	UHGV-1460665_11	UniRef90_A0A139RIK3	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-1460665_11	565653.EGBG_01973	89.0	6.92e-21	N/A	N/A
structural_annotation	UHGV-1460665_11	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_12	phrog_78	83.4	2.6e-24	tail terminator	connector
UniRef90	UHGV-1460665_12	UniRef90_A0A139RIS6	190.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-1460665_12	999425.HMPREF9186_02040	247.0	0	N/A	N/A
structural_annotation	UHGV-1460665_12	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_13	phrog_88	111.0	9.5e-33	major tail protein	tail
UniRef90	UHGV-1460665_13	UniRef90_K8MEB4	389.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-1460665_13	1035189.HMPREF9954_1930	208.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1460665_13	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1460665_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1460665_13	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1460665_14	UniRef90_A0A1F1DLF7	393.0	0	N/A	N/A
Pfam	UHGV-1460665_14	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1460665_14	PF11611,MF_00791,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_15	phrog_187	62.9	5e-18	head-tail adaptor	connector
UniRef90	UHGV-1460665_15	UniRef90_A0A139NGQ9	145.0	1.24716e-43	Putative phage protein	N/A
PHROG	UHGV-1460665_17	phrog_1293	1265.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1460665_17	UniRef90_A0A1F1A2Q2	1912.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1460665_17	999425.HMPREF9186_02045	1747.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1460665_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1460665_17	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1460665_17	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1460665_17	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_18	phrog_33	82.8	6.9e-24	distal tail protein Dit	tail
UniRef90	UHGV-1460665_18	UniRef90_A0A8B1YSX1	425.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1460665_18	999425.HMPREF9186_02046	463.0	0	N/A	N/A
COG	UHGV-1460665_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1460665_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_19	phrog_2270	528.5	0	N/A	unknown function
UniRef90	UHGV-1460665_19	UniRef90_A0A414PKN1	1897.0	0	Prophage_tailD1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1460665_19	999425.HMPREF9186_02047	1434.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1460665_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1460665_19	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
NCBIFam	UHGV-1460665_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1460665_19	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1460665_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_21	phrog_1554	206.9	0	N/A	unknown function
UniRef90	UHGV-1460665_21	UniRef90_A0A359YI08	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-1460665_21	1005705.HMPREF9967_1055	179.0	0	N/A	N/A
structural_annotation	UHGV-1460665_21	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_22	phrog_1296	91.5	4.3e-27	holin	lysis
UniRef90	UHGV-1460665_22	UniRef90_A0A0M9FH77	100.0	1.29e-25	Phage membrane protein	N/A
PHROG	UHGV-1460665_23	phrog_10091	79.2	4.5e-23	holin	lysis
UniRef90	UHGV-1460665_23	UniRef90_A0A428HZ21	160.0	0	Bacteriophage holin	N/A
eggNOG-mapper	UHGV-1460665_23	999425.HMPREF9186_02051	153.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1460665_23	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1460665_23	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1460665_23	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1460665_23	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_24	phrog_1309	261.6	0	endolysin	lysis
UniRef90	UHGV-1460665_24	UniRef90_A0A1F1CBS4	485.0	0	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-1460665_24	999425.HMPREF9186_02052	484.0	0	Bacterial SH3 domain	N/A
Pfam	UHGV-1460665_24	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1460665_24	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-1460665_24	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1460665_24	PF08460,PF05382,TIGR02219,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1460665_25	phrog_6487	179.6	0	N/A	unknown function
UniRef90	UHGV-1460665_25	UniRef90_A0A0T8EKF4	118.0	4.72e-31	N/A	N/A
eggNOG-mapper	UHGV-1460665_25	999425.HMPREF9186_02053	265.0	0	N/A	N/A
structural_annotation	UHGV-1460665_25	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1460665	Yes	21,290	41	55	1