vOTU vOTU-141978

vOTU: vOTU-141978

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-141978
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01064 → vGENUS-13282 → vOTU-141978
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0001802
Biosample ID	N/A
Genome length (bp)	19,193 bps
CheckV completeness	59.19% (Medium-quality)
CDS count	27
CDS density	95.80%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488	Total connections	21	Host agreement	80.95
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488 → ERR7747522_bin.157	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0001802_2	phrog_1271	41.1	0.000000000026	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001802_2	UniRef90_R6DRH1	223.0	0	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-0001802_2	742738.HMPREF9460_00886	102.0	1.3e-25	N/A	N/A
COG	UHGV-0001802_3	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
KOfam	UHGV-0001802_4	K01447	74.2	2.3e-21	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0001802_4	phrog_7698	170.8	0	endolysin	lysis
UniRef90	UHGV-0001802_4	UniRef90_R6DZ86	508.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0001802_4	1203606.HMPREF1526_01931	215.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0001802_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0001802_4	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0001802_4	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0001802_4	PF01510,MF_04111,NF008758,NF038080,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_5	phrog_263	69.6	3.1e-20	holin	lysis
UniRef90	UHGV-0001802_5	UniRef90_R6E0V9	171.0	0	Holin SPP1 family	N/A
eggNOG-mapper	UHGV-0001802_5	1158607.UAU_01779	57.8	0.000000000856	SPP1 phage holin	N/A
Pfam	UHGV-0001802_5	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0001802_5	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0001802_5	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_6	phrog_1863	84.6	5.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0001802_6	693746.OBV_18260	102.0	2.22e-27	N/A	N/A
PHROG	UHGV-0001802_12	phrog_1067	284.7	0	minor head protein	head and packaging
UniRef90	UHGV-0001802_12	UniRef90_A0A1Y4NA30	294.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0001802_12	1160721.RBI_I01574	286.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0001802_12	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0001802_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0001802_12	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0001802_13	phrog_33	53.4	0.000000000000007	distal tail protein Dit	tail
UniRef90	UHGV-0001802_13	UniRef90_UPI00164BA811	105.0	5.26e-24	phage tail family protein	N/A
eggNOG-mapper	UHGV-0001802_13	1160721.RBI_I01575	115.0	1.39e-28	Phage tail protein	N/A
COG	UHGV-0001802_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0001802_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_14	phrog_6900	256.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0001802_14	UniRef90_A0A373CK98	292.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-0001802_14	411470.RUMGNA_02076	292.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0001802_14	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0001802_14	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001802_15	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_16	phrog_88	82.8	3.8e-24	major tail protein	tail
UniRef90	UHGV-0001802_16	UniRef90_A5ZPL3	102.0	1.77e-23	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0001802_16	411459.RUMOBE_00930	102.0	2.97e-24	N/A	N/A
NCBIFam	UHGV-0001802_16	TIGR01603.1	N/A	N/A	major tail protein	N/A
eggNOG-mapper	UHGV-0001802_17	1216932.CM240_0622	59.3	0.000000000816	High confidence in function and specificity	N/A
structural_annotation	UHGV-0001802_17	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001802_18	UniRef90_A0A174CK72	88.6	1.1e-19	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0001802_18	97139.C824_05967	76.6	6.29e-16	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0001802_18	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_19	phrog_1951	68.0	1e-19	head-tail adaptor	connector
NCBIFam	UHGV-0001802_19	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0001802_19	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_20	phrog_5223	63.8	2e-18	neck protein	connector
UniRef90	UHGV-0001802_20	UniRef90_UPI0019613678	57.4	0.0000000372	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0001802_20	561177.ANHYDRO_01411	64.3	0.00000000000379	N/A	N/A
structural_annotation	UHGV-0001802_20	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_21	phrog_10	60.4	1.2e-17	major head protein	head and packaging
UniRef90	UHGV-0001802_21	UniRef90_A0A1C5W5F9	347.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0001802_21	742740.HMPREF9474_04304	373.0	0	Phage capsid family	N/A
Pfam	UHGV-0001802_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0001802_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0001802_21	PF05065,PF09032,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0001802_22	K06904	83.3	4e-24	N/A	N/A
PHROG	UHGV-0001802_22	phrog_80	97.4	2.1e-28	head maturation protease	head and packaging
UniRef90	UHGV-0001802_22	UniRef90_A0A2V2GKJ3	254.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0001802_22	1321814.HMPREF9089_00929	193.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0001802_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0001802_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0001802_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_23	phrog_12	112.0	3.9e-33	portal protein	head and packaging
UniRef90	UHGV-0001802_23	UniRef90_A0A2V2GK98	487.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0001802_23	742740.HMPREF9474_04306	373.0	0	Phage portal protein	N/A
Pfam	UHGV-0001802_23	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0001802_23	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0001802_23	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_24	phrog_9	336.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0001802_24	UniRef90_C9LCN6	810.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0001802_24	411470.RUMGNA_02062	810.0	0	N/A	N/A
Pfam	UHGV-0001802_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0001802_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0001802_24	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0001802_24	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0001802_25	phrog_1066	108.3	4.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0001802_25	397290.C810_00417	141.0	4.39027e-42	N/A	N/A
structural_annotation	UHGV-0001802_25	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001802_26	UniRef90_A0A350U006	89.0	6.64e-21	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0001802_26	1203606.HMPREF1526_01332	90.9	1.79e-22	HNH nucleases	N/A
COG	UHGV-0001802_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0001802_27	PF09055	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0001802	Yes	19,193	44	59	1