vOTU vOTU-142248

vOTU: vOTU-142248

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-142248
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00034 → vOTU-142248
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0118815
Biosample ID	N/A
Genome length (bp)	36,243 bps
CheckV completeness	85.76% (Medium-quality)
CDS count	61
CDS density	92.13%
tRNA count	6
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	578	Host agreement	98.44
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	11	Host agreement	72.73

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0118815_1	411483.FAEPRAA2165_00409	67.8	0.0000000000000058	N/A	N/A
PHROG	UHGV-0118815_2	phrog_28749	182.3	0	N/A	unknown function
UniRef90	UHGV-0118815_2	UniRef90_UPI0012DDA932	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-0118815_2	657322.FPR_24750	165.0	0	N/A	N/A
Pfam	UHGV-0118815_2	PF19537	N/A	N/A	N/A	DUF6061
structural_annotation	UHGV-0118815_2	PF19537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_4	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_5	phrog_20016	206.3	0	N/A	unknown function
UniRef90	UHGV-0118815_5	UniRef90_A0A285PT46	215.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0118815_5	1226322.HMPREF1545_00077	189.0	0	N/A	N/A
structural_annotation	UHGV-0118815_5	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_7	phrog_16490	198.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0118815_7	397290.C810_01328	126.0	1.4e-31	N/A	N/A
PHROG	UHGV-0118815_8	phrog_22984	70.3	2.7e-20	N/A	unknown function
PHROG	UHGV-0118815_9	phrog_21718	87.9	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0118815_9	397290.C810_05210	78.2	4.47e-16	N/A	N/A
PHROG	UHGV-0118815_10	phrog_3754	90.5	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0118815_10	1485543.JMME01000025_gene2462	104.0	9.78e-28	N/A	N/A
eggNOG-mapper	UHGV-0118815_12	1235798.C817_04600	57.4	0.00000000314	N/A	N/A
structural_annotation	UHGV-0118815_12	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_13	phrog_99	49.1	0.000000000000091	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0118815_13	UniRef90_A0A0K9N8D8	84.7	3.3e-16	Putative AP2 domain protein	N/A
eggNOG-mapper	UHGV-0118815_13	742740.HMPREF9474_00071	81.3	0.00000000000000105	N/A	N/A
structural_annotation	UHGV-0118815_13	PF18337,PF00847	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_14	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0118815_17	K24213	79.7	2.5e-23	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0118815_17	phrog_5073	106.7	2.2e-31	tail fiber protein	tail
eggNOG-mapper	UHGV-0118815_17	411483.FAEPRAA2165_00757	179.0	0	N/A	N/A
Pfam	UHGV-0118815_17	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0118815_17	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_18	phrog_15303	122.2	2e-36	N/A	unknown function
KOfam	UHGV-0118815_20	K07273	170.5	0	acm; lysozyme	N/A
PHROG	UHGV-0118815_20	phrog_291	140.2	1.79997e-41	endolysin	lysis
UniRef90	UHGV-0118815_20	UniRef90_E2ZES5	295.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0118815_20	748224.HMPREF9436_00154	295.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0118815_20	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0118815_20	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0118815_20	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_21	phrog_2310	58.8	5.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0118815_22	657322.FPR_13530	65.1	0.0000000121	domain, Protein	N/A
COG	UHGV-0118815_22	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_23	phrog_3558	218.0	0	tail protein	tail
UniRef90	UHGV-0118815_23	UniRef90_UPI001C01D15B	157.0	2.38e-37	phage tail protein	N/A
eggNOG-mapper	UHGV-0118815_23	1235799.C818_04233	100.0	1.3e-19	Prophage endopeptidase tail	N/A
Pfam	UHGV-0118815_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0118815_23	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0118815_23	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_24	phrog_33	43.7	0.0000000000055	distal tail protein Dit	tail
UniRef90	UHGV-0118815_24	UniRef90_A0A417QGC1	121.0	5.31e-30	MtfA protein	N/A
eggNOG-mapper	UHGV-0118815_24	1235792.C808_00094	112.0	2.17e-27	phage tail	N/A
COG	UHGV-0118815_24	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0118815_24	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_25	phrog_28775	113.6	1.1e-36	tail length tape measure protein	tail
UniRef90	UHGV-0118815_25	UniRef90_A0A6N7TLD3	1051.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0118815_25	1216932.CM240_0683	130.0	4.77e-28	tape measure	N/A
Pfam	UHGV-0118815_25	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0118815_25	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0118815_25	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0118815_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_28	phrog_885	65.8	5.6e-19	major tail protein	tail
eggNOG-mapper	UHGV-0118815_28	1111121.HMPREF1247_0789	158.0	0	N/A	N/A
structural_annotation	UHGV-0118815_28	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_29	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_30	phrog_17977	40.5	0.00000000004	N/A	unknown function
UniRef90	UHGV-0118815_30	UniRef90_A0A844DHJ8	119.0	1.63e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0118815_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_32	phrog_544	146.1	2.29813e-43	major head protein	head and packaging
UniRef90	UHGV-0118815_32	UniRef90_R0BKA1	431.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0118815_32	476272.RUMHYD_01776	327.0	0	N/A	N/A
structural_annotation	UHGV-0118815_32	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_33	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_34	phrog_478	124.2	5.7e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0118815_34	UniRef90_A0A373Q857	166.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0118815_34	1111121.HMPREF1247_0834	97.4	2.78e-24	N/A	N/A
PHROG	UHGV-0118815_35	phrog_5	52.2	0.000000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0118815_35	UniRef90_A0A6N7TNP6	291.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0118815_35	1123309.AQYB01000018_gene814	96.3	1.76e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0118815_35	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0118815_35	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0118815_35	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_37	phrog_8680	202.8	0	N/A	unknown function
UniRef90	UHGV-0118815_37	UniRef90_A0A844D688	451.0	0	N/A	N/A
eggNOG-mapper	UHGV-0118815_37	1423790.BN53_04265	180.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0118815_37	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0118815_37	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0118815_37	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_39	phrog_2468	83.8	1.5e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0118815_39	UniRef90_A0A6N7TLR7	627.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0118815_39	386415.NT01CX_2177	99.4	2.27e-20	Phage Mu protein F like protein	N/A
Pfam	UHGV-0118815_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0118815_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_39	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_40	phrog_64	126.1	1.6e-37	portal protein	head and packaging
UniRef90	UHGV-0118815_40	UniRef90_A0A6N7TNT3	815.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0118815_40	642492.Clole_2764	82.4	0.0000000000000561	phage portal protein, SPP1	N/A
Pfam	UHGV-0118815_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0118815_40	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0118815_41	K06909	139.6	3.00004e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0118815_41	phrog_10250	175.3	0	N/A	unknown function
UniRef90	UHGV-0118815_41	UniRef90_A0A844D8I4	834.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0118815_41	411490.ANACAC_00783	491.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0118815_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0118815_41	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0118815_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0118815_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0118815_41	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0118815_42	UniRef90_UPI0018CC2891	117.0	7.59e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0118815_42	1226322.HMPREF1545_00042	108.0	5.07e-28	N/A	N/A
structural_annotation	UHGV-0118815_42	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_44	phrog_36	67.3	2.8e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0118815_44	UniRef90_A0A6N7TNN9	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-0118815_44	748224.HMPREF9436_01463	77.0	6.3e-16	N/A	N/A
Pfam	UHGV-0118815_44	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0118815_44	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0118815_46	K01160	57.1	5.7e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0118815_46	phrog_34	56.2	7.8e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0118815_46	UniRef90_A0A6N7TND6	214.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0118815_46	875454.BAEW01000002_gene491	134.0	6.77e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0118815_46	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0118815_46	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0118815_46	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_47	phrog_3136	115.2	2.9e-34	N/A	unknown function
UniRef90	UHGV-0118815_47	UniRef90_A0A6N7TMC2	226.0	0	ASCH domain-containing protein	N/A
Pfam	UHGV-0118815_47	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0118815_47	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0118815_47	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_48	phrog_424	90.9	1.4e-26	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0118815_48	445972.ANACOL_01819	443.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0118815_48	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0118815_48	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_50	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_51	phrog_15768	140.8	9.00054e-42	N/A	unknown function
UniRef90	UHGV-0118815_51	UniRef90_A0A329U2I8	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-0118815_51	748224.HMPREF9436_03357	186.0	0	N/A	N/A
Pfam	UHGV-0118815_51	PF19808	N/A	N/A	N/A	DUF6291
KOfam	UHGV-0118815_52	K03111	137.0	2.1e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0118815_52	phrog_44	141.0	6.69961e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0118815_52	UniRef90_UPI001C00AA91	218.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0118815_52	718252.FP2_06770	207.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0118815_52	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0118815_52	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0118815_52	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0118815_52	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0118815_52	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_53	phrog_561	125.0	6.4e-37	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0118815_53	UniRef90_A0A1G8PW75	149.0	4.96999e-41	RecT family protein	N/A
eggNOG-mapper	UHGV-0118815_53	563192.HMPREF0179_00147	154.0	1.00053e-42	N/A	N/A
structural_annotation	UHGV-0118815_53	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_55	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_57	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_58	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0118815_59	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0118815_61	phrog_27197	94.2	8.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0118815_61	573061.Clocel_3578	55.5	0.000000417	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0118815_61	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0118815_61	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0118815	Yes	36,243	55	86	1
UHGV-1379794	No	36,203	55	86	1