vOTU vOTU-142528

vOTU: vOTU-142528

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-142528
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 → vSUBFAM-00274 → vOTU-142528
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter bartlettii
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1425406
Biosample ID	N/A
Genome length (bp)	34,297 bps
CheckV completeness	85.23% (Medium-quality)
CDS count	48
CDS density	90.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter bartlettii	Total connections	133	Host agreement	93.98
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	3	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1425406_1	phrog_6775	53.1	0.0000000000000061	N/A	unknown function
PHROG	UHGV-1425406_2	phrog_2329	82.6	2.5e-24	N/A	unknown function
UniRef90	UHGV-1425406_2	UniRef90_UPI00190FBB8D	67.8	0.000000000000149	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_2	1292035.H476_0264	63.5	0.00000000000102	N/A	N/A
structural_annotation	UHGV-1425406_2	PF04014,NF008463,COG2336	N/A	N/A	N/A	N/A
KOfam	UHGV-1425406_4	K01448	126.9	1.8e-37	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1425406_4	phrog_435	113.2	3e-33	endolysin	lysis
UniRef90	UHGV-1425406_4	UniRef90_UPI001106ED5F	488.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1425406_4	445973.CLOBAR_01731	434.0	0	Ami_3	N/A
Pfam	UHGV-1425406_4	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1425406_4	PF19087	N/A	N/A	N/A	DUF5776
COG	UHGV-1425406_4	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1425406_4	PF01520,PF19087,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_5	phrog_1129	82.8	2.4e-24	holin	lysis
UniRef90	UHGV-1425406_5	UniRef90_A0A0B3VH17	119.0	2.61e-33	Holin	N/A
eggNOG-mapper	UHGV-1425406_5	702450.CUW_0551	106.0	3.39e-29	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1425406_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1425406_5	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_6	phrog_1193	69.3	4e-20	hemolysin	other
UniRef90	UHGV-1425406_6	UniRef90_UPI0018AB0AA6	130.0	2.71e-38	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-1425406_6	445335.CBN_3060	56.6	0.00000000134	Haemolysin XhlA	N/A
Pfam	UHGV-1425406_6	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
UniRef90	UHGV-1425406_7	UniRef90_A0A3D1WPK4	333.0	0	ATPgrasp_ST domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_7	698758.AXY_19860	223.0	0	Sugar-transfer associated ATP-grasp	N/A
Pfam	UHGV-1425406_7	PF14397	N/A	N/A	Sugar-transfer associated ATP-grasp	ATPgrasp_ST
COG	UHGV-1425406_7	COG0189	N/A	N/A	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	N/A
NCBIFam	UHGV-1425406_8	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1425406_8	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_11	phrog_16573	47.3	0.00000000000016	N/A	unknown function
UniRef90	UHGV-1425406_11	UniRef90_W1WLY3	609.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_11	428127.EUBDOL_01565	59.7	0.0000012	cellulase activity	N/A
Pfam	UHGV-1425406_11	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-1425406_11	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
KOfam	UHGV-1425406_12	K11062	57.9	5.2e-17	entD; probable enterotoxin D	N/A
PHROG	UHGV-1425406_12	phrog_13289	436.5	0	tail protein	tail
UniRef90	UHGV-1425406_12	UniRef90_UPI0011CA3AC4	2709.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_12	1151292.QEW_4523	365.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1425406_12	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1425406_12	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1425406_12	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
NCBIFam	UHGV-1425406_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1425406_12	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1425406_12	PF14594,PF08239,PF19081,PF13229,TIGR01665,NF040678,COG4926,COG4991,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_13	phrog_33	89.8	4.7e-26	distal tail protein Dit	tail
UniRef90	UHGV-1425406_13	UniRef90_A0A1C5YVW7	478.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1425406_13	1582149.A0A0A8WHP7_9CAUD	129.0	8.47e-34	Phage tail protein	N/A
structural_annotation	UHGV-1425406_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_14	phrog_1533	472.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1425406_14	UniRef90_R5XFK4	465.0	0	Phage tail tape measure protein TP901 family core region	N/A
eggNOG-mapper	UHGV-1425406_14	1121296.JONJ01000026_gene2163	293.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1425406_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1425406_14	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1425406_14	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1425406_14	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_15	phrog_6541	79.1	3e-23	N/A	unknown function
eggNOG-mapper	UHGV-1425406_15	1196322.A370_04057	54.3	0.00000000777	N/A	N/A
PHROG	UHGV-1425406_16	phrog_6280	137.7	4.90006e-41	N/A	unknown function
UniRef90	UHGV-1425406_16	UniRef90_UPI001C800AF1	122.0	9.69e-33	esterase	N/A
eggNOG-mapper	UHGV-1425406_16	1443125.Z962_12410	98.6	2.3e-24	N/A	N/A
PHROG	UHGV-1425406_17	phrog_6686	184.4	0	tail tube protein	tail
eggNOG-mapper	UHGV-1425406_17	1304880.JAGB01000002_gene2211	115.0	1.03e-29	N/A	N/A
structural_annotation	UHGV-1425406_17	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_18	phrog_7585	78.5	9.4e-23	N/A	unknown function
structural_annotation	UHGV-1425406_18	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_19	phrog_5	43.4	0.0000000000095	tail completion or Neck1 protein	connector
UniRef90	UHGV-1425406_19	UniRef90_A0A2H4J736	87.4	2.34e-19	Putative tail component protein	N/A
eggNOG-mapper	UHGV-1425406_19	559189.B6SBT4_9CAUD	92.4	6.3e-22	N/A	N/A
structural_annotation	UHGV-1425406_19	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_20	phrog_8435	97.8	7.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1425406_20	536233.CLO_0543	50.8	0.0000023	N/A	N/A
structural_annotation	UHGV-1425406_20	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_21	phrog_4020	82.6	3.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1425406_21	1121342.AUCO01000012_gene1692	64.7	0.00000000000126	N/A	N/A
PHROG	UHGV-1425406_22	phrog_544	224.2	0	major head protein	head and packaging
UniRef90	UHGV-1425406_22	UniRef90_A0A6M0WT90	389.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1425406_22	1499683.CCFF01000017_gene2147	259.0	0	N/A	N/A
NCBIFam	UHGV-1425406_22	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
PHROG	UHGV-1425406_23	phrog_559	209.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_23	UniRef90_Q9AYW5	303.0	0	Group I intron	N/A
eggNOG-mapper	UHGV-1425406_23	35241.Q9AYW5_BPTU2	303.0	0	N/A	N/A
Pfam	UHGV-1425406_23	PF21817	N/A	N/A	CapR homology domain	CapR
structural_annotation	UHGV-1425406_23	PF18741,PF14311,MF_04160,NF007294,COG3727	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_24	phrog_544	68.8	9.2e-20	major head protein	head and packaging
UniRef90	UHGV-1425406_24	UniRef90_A0A380K697	66.6	0.000000000000162	MHP	N/A
eggNOG-mapper	UHGV-1425406_24	1215915.BN193_09100	77.0	2.28e-16	N/A	N/A
PHROG	UHGV-1425406_25	phrog_194	133.9	1.2e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-1425406_25	UniRef90_A0A1C5YXG1	347.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1425406_25	1033740.CAEW01000026_gene530	117.0	1.86e-30	Phage minor structural protein GP20	N/A
Pfam	UHGV-1425406_25	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1425406_28	phrog_1657	193.5	0	head morphogenesis	head and packaging
UniRef90	UHGV-1425406_28	UniRef90_A0A1C5YWY9	548.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
eggNOG-mapper	UHGV-1425406_28	1582149.A0A0A8WEF5_9CAUD	250.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1425406_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
PHROG	UHGV-1425406_29	phrog_64	186.9	0	portal protein	head and packaging
UniRef90	UHGV-1425406_29	UniRef90_A0A1C5YX51	907.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1425406_29	1443122.Z958_p0036	165.0	1.02995e-42	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1425406_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1425406_29	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1425406_30	K06909	81.3	1.5e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1425406_30	phrog_10250	230.9	0	N/A	unknown function
UniRef90	UHGV-1425406_30	UniRef90_A0A1C5YXC2	451.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1425406_30	411490.ANACAC_00783	281.0	0	Phage terminase, large subunit, PBSX family	N/A
NCBIFam	UHGV-1425406_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1425406_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1425406_30	PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_31	phrog_314	51.2	0.000000000000015	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_31	UniRef90_UPI00087F42F2	234.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1425406_31	1345695.CLSA_c35600	115.0	3.79e-29	GIY-YIG type nucleases (URI domain)	N/A
Pfam	UHGV-1425406_31	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-1425406_31	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-1425406_31	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-1425406_31	PF19835,PF07453,TIGR01453,COG2827	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_32	phrog_2	71.2	2.5e-20	terminase large subunit	head and packaging
UniRef90	UHGV-1425406_32	UniRef90_UPI00156FB1D5	278.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1425406_32	642492.Clole_2765	290.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1425406_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-1425406_33	phrog_1889	189.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1425406_33	UniRef90_A0A446I889	294.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1425406_33	1158609.I586_00076	115.0	4.39e-28	Phage terminase small subunit	N/A
Pfam	UHGV-1425406_33	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-1425406_33	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1425406_33	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1425406_33	PF10668,PF02996,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_34	phrog_9079	71.9	7.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-1425406_34	1391646.AVSU01000053_gene947	70.9	0.00000000000000857	N/A	N/A
PHROG	UHGV-1425406_35	phrog_36	83.2	3.6e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1425406_35	UniRef90_A0A1C5YXD8	231.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1425406_35	1415774.U728_2924	68.6	0.00000000000157	sigma factor activity	N/A
NCBIFam	UHGV-1425406_35	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
COG	UHGV-1425406_35	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1425406_35	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_38	phrog_4072	56.1	6.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1425406_38	545697.HMPREF0216_02811	48.9	0.000000651	N/A	N/A
PHROG	UHGV-1425406_39	phrog_824	137.2	5.70006e-41	N/A	unknown function
UniRef90	UHGV-1425406_39	UniRef90_UPI0018AC7469	175.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_39	397288.C806_00096	139.0	6.68994e-41	VRR_NUC	N/A
Pfam	UHGV-1425406_39	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1425406_39	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_40	phrog_59	167.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_40	UniRef90_UPI001E4F9478	186.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1425406_40	767806.D7PQ37_9CAUD	136.0	2.24e-38	HNH endonuclease	N/A
PADLOC	UHGV-1425406_40	HEase_00016	111.4	1.2e-32	homing endonuclease	RM
Pfam	UHGV-1425406_40	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1425406_40	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1425406_40	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1425406_41	877420.ATVW01000043_gene1364	46.6	0.00000166	N/A	N/A
Pfam	UHGV-1425406_41	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
structural_annotation	UHGV-1425406_41	PF19891,TIGR04563,COG4877	N/A	N/A	N/A	N/A
Pfam	UHGV-1425406_42	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-1425406_42	PF09889	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1425406_43	PF09889	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_44	phrog_374	72.0	1e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_44	UniRef90_A0A1C5YZ22	251.0	0	HTH_Tnp_Tc3_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_44	1410624.JNKK01000065_gene1264	67.8	0.0000000000531	N/A	N/A
Pfam	UHGV-1425406_44	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-1425406_44	PF02796,TIGR04381,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1425406_46	K02315	138.9	4.39994e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1425406_46	phrog_50	143.3	1.80067e-42	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_46	UniRef90_UPI00110642E5	363.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1425406_46	1235802.C823_05699	173.0	0	PFAM IstB-like ATP binding protein	N/A
Pfam	UHGV-1425406_46	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1425406_46	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1425406_46	PF01695,MF_01919,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_47	phrog_5968	181.2	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_47	UniRef90_UPI001031BE48	228.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1425406_47	1292035.H476_1030	223.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-1425406_47	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-1425406_47	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1425406_47	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1425406_47	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1425406_47	PF09681,TIGR01714,COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-1425406_48	phrog_155	117.3	1.3e-34	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425406_48	UniRef90_UPI0018D1E8FC	284.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1425406_48	536232.CLM_1632	190.0	0	ERF superfamily	N/A
Pfam	UHGV-1425406_48	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1425406_48	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1425406	Yes	34,297	31	85	1