vOTU vOTU-142632

vOTU: vOTU-142632

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-142632
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-01342 → vOTU-142632
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1383198
Biosample ID	N/A
Genome length (bp)	36,100 bps
CheckV completeness	84.53% (Medium-quality)
CDS count	44
CDS density	95.28%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	46	Host agreement	91.3
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 84.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1383198_1	phrog_16490	122.3	2.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-1383198_1	1408437.JNJN01000043_gene803	170.0	0	N/A	N/A
PHROG	UHGV-1383198_2	phrog_22984	77.6	1.3e-22	N/A	unknown function
PHROG	UHGV-1383198_3	phrog_21718	103.1	2.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-1383198_3	397290.C810_05210	73.2	0.0000000000000303	N/A	N/A
PHROG	UHGV-1383198_4	phrog_3754	94.2	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1383198_4	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-1383198_5	phrog_22978	537.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1383198_5	693746.OBV_01590	487.0	0	N/A	N/A
Pfam	UHGV-1383198_5	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UniRef90	UHGV-1383198_7	UniRef90_A0A8D9UGT1	137.0	2.57e-39	Sigma C capsid protein	N/A
PHROG	UHGV-1383198_8	phrog_511	224.1	0	internal virion protein	head and packaging
UniRef90	UHGV-1383198_8	UniRef90_A0A8D9UH72	863.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1383198_8	1226322.HMPREF1545_00785	325.0	0	N/A	N/A
structural_annotation	UHGV-1383198_8	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_9	phrog_12105	83.5	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1383198_9	1519439.JPJG01000060_gene1891	62.8	0.0000000000499	N/A	N/A
PHROG	UHGV-1383198_10	phrog_435	64.0	2.9e-18	endolysin	lysis
UniRef90	UHGV-1383198_10	UniRef90_A0A8D9PDS4	442.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-1383198_10	1226322.HMPREF1545_01953	94.0	2.48e-20	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1383198_10	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1383198_10	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1383198_10	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_11	phrog_1129	75.2	5.7e-22	holin	lysis
UniRef90	UHGV-1383198_11	UniRef90_A0A8D9PDD4	181.0	0	Holin	N/A
eggNOG-mapper	UHGV-1383198_11	1226322.HMPREF1545_00069	111.0	8.74e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1383198_11	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1383198_11	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_12	phrog_4105	104.8	4.7e-31	N/A	unknown function
UniRef90	UHGV-1383198_12	UniRef90_A0A8D9UHA9	204.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-1383198_12	411460.RUMTOR_01326	142.0	8.18358e-43	N/A	N/A
KOfam	UHGV-1383198_13	K01104	48.8	0.000000000000068	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-1383198_13	UniRef90_UPI001BF10870	216.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-1383198_13	794903.OPIT5_20595	77.8	0.00000000000201	protein tyrosine phosphatase activity	N/A
Pfam	UHGV-1383198_13	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-1383198_13	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
structural_annotation	UHGV-1383198_13	PF13350,TIGR01244,COG2365	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_14	phrog_1419	57.4	1.3e-16	tail protein	tail
eggNOG-mapper	UHGV-1383198_14	1121097.JCM15093_1942	56.6	0.000000183	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-1383198_14	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-1383198_15	phrog_15239	85.8	2.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1383198_15	1449126.JQKL01000003_gene1694	52.4	0.00000096	N/A	N/A
PHROG	UHGV-1383198_16	phrog_1357	273.6	0	major head protein	head and packaging
UniRef90	UHGV-1383198_16	UniRef90_A0A8D9UH64	622.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1383198_16	1449126.JQKL01000003_gene1695	397.0	0	N/A	N/A
Pfam	UHGV-1383198_16	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1383198_16	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1383198_16	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_17	phrog_13908	307.5	0	N/A	unknown function
UniRef90	UHGV-1383198_17	UniRef90_A0A844DRV7	112.0	2.79e-24	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1383198_17	1410650.JHWL01000003_gene2831	120.0	5.01e-29	N/A	N/A
UniRef90	UHGV-1383198_18	UniRef90_A0A8D9PDR6	181.0	0	YsxB-like protein	N/A
Pfam	UHGV-1383198_18	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-1383198_18	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_19	phrog_156	337.6	0	portal protein	head and packaging
UniRef90	UHGV-1383198_19	UniRef90_A0A8D9UH10	1137.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1383198_19	748224.HMPREF9436_01396	531.0	0	N/A	N/A
structural_annotation	UHGV-1383198_19	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1383198_20	K06909	118.1	9e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1383198_20	phrog_979	197.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1383198_20	UniRef90_A0A8D9PDR5	980.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1383198_20	657322.FPR_02290	617.0	0	Terminase-like family	N/A
Pfam	UHGV-1383198_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1383198_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1383198_20	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_21	phrog_606	88.0	9.6e-26	terminase small subunit	head and packaging
UniRef90	UHGV-1383198_21	UniRef90_UPI00195648BB	184.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1383198_21	445972.ANACOL_01838	147.0	3.1249e-43	DNA-packaging protein gp3	N/A
Pfam	UHGV-1383198_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-1383198_22	K22299	48.1	0.00000000000029	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1383198_22	phrog_8	67.1	3.7e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1383198_22	UniRef90_A0A8D9PDC4	154.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-1383198_22	1226322.HMPREF1545_00039	79.3	1.19e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-1383198_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383198_22	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383198_22	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_26	phrog_1384	135.0	4.7e-40	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1383198_26	665956.HMPREF1032_03086	275.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1383198_26	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-1383198_28	K17398	87.5	3.7e-38	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-1383198_28	phrog_116	92.4	1.6e-36	DNA methyltransferase	other
UniRef90	UHGV-1383198_28	UniRef90_A0A1Q6RQI3	577.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1383198_28	1235797.C816_01614	450.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-1383198_28	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1383198_28	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1383198_28	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1383198_30	K00390	59.1	1.1e-17	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1383198_30	phrog_424	132.5	3e-39	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1383198_30	UniRef90_A0A1H7KWC5	320.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-1383198_30	665956.HMPREF1032_00140	276.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1383198_30	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1383198_30	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1383198_30	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_31	phrog_190	105.0	6.9e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383198_31	UniRef90_A0A8D9PDD6	269.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1383198_31	553220.CAMGR0001_2115	81.6	4.4e-18	N/A	N/A
Pfam	UHGV-1383198_31	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1383198_31	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1383198_33	K02315	120.2	2.3e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1383198_33	phrog_50	126.6	2.4e-37	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383198_33	UniRef90_A0A810Q3X8	299.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1383198_33	445972.ANACOL_01829	186.0	0	N/A	N/A
Pfam	UHGV-1383198_33	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1383198_33	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1383198_33	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_34	phrog_15768	75.8	5.6e-23	N/A	unknown function
UniRef90	UHGV-1383198_34	UniRef90_UPI001959E913	104.0	3.22e-24	N/A	N/A
eggNOG-mapper	UHGV-1383198_34	445970.ALIPUT_02689	80.9	0.00000000000000112	DNA-binding transcription factor activity	N/A
Pfam	UHGV-1383198_34	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1383198_34	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-1383198_34	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1383198_36	K03111	121.0	1.6e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1383198_36	phrog_44	115.9	3.9e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383198_36	UniRef90_A0A8D9PDS7	243.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-1383198_36	552398.HMPREF0866_01635	119.0	1.41e-32	Single-strand binding protein family	N/A
Pfam	UHGV-1383198_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1383198_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1383198_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1383198_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1383198_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_37	phrog_7566	96.8	1.3e-28	N/A	unknown function
UniRef90	UHGV-1383198_37	UniRef90_A0A8D9UHC0	193.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1383198_37	693746.OBV_24070	122.0	5.46e-35	N/A	N/A
PHROG	UHGV-1383198_39	phrog_72	53.6	0.0000000000000017	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383198_39	UniRef90_A0A8D9PDS2	350.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1383198_39	445972.ANACOL_01825	135.0	4.89e-38	N/A	N/A
structural_annotation	UHGV-1383198_39	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383198_40	UniRef90_B0PAM4	158.0	1.4013e-45	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-1383198_40	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383198_41	UniRef90_A0A6N9QJT6	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-1383198_41	33035.JPJF01000135_gene5082	114.0	5.68e-29	N/A	N/A
Pfam	UHGV-1383198_41	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1383198_41	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383198_43	UniRef90_A0A8D9UH91	309.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1383198_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383198_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383198_43	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-1383198_44	phrog_27197	69.8	1.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-1383198_44	767434.Fraau_1460	55.1	0.000000459	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-1383198_44	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1383198_44	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1383198_44	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1383198	Yes	36,100	57	85	1