vOTU vOTU-143336

vOTU: vOTU-143336

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-143336
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00206 → vOTU-143336
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1350726
Biosample ID	N/A
Genome length (bp)	44,459 bps
CheckV completeness	61.14% (Medium-quality)
CDS count	74
CDS density	88.63%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	49	Host agreement	91.84
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger → Gemmiger qucibialis	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1350726_1	phrog_1535	131.6	6.1e-39	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1350726_1	1121866.AUGK01000003_gene1437	279.0	0	phage tail tape measure protein	N/A
COG	UHGV-1350726_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1350726_2	phrog_1194	52.0	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1350726_2	1507.HMPREF0262_01188	57.0	0.00000000879	N/A	N/A
structural_annotation	UHGV-1350726_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_3	phrog_6616	91.5	4.1e-27	tail protein	tail
PHROG	UHGV-1350726_7	phrog_19280	118.5	1e-35	N/A	unknown function
UniRef90	UHGV-1350726_7	UniRef90_UPI00156F1082	208.0	0	N/A	N/A
eggNOG-mapper	UHGV-1350726_7	1160721.RBI_I01569	111.0	3.85e-24	N/A	N/A
Pfam	UHGV-1350726_7	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1350726_7	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_9	phrog_134	60.0	3.1e-17	N/A	unknown function
UniRef90	UHGV-1350726_9	UniRef90_UPI00189E1C2D	67.0	0.0000000000000808	XkdX family protein	N/A
eggNOG-mapper	UHGV-1350726_9	742740.HMPREF9474_02255	54.7	0.000000000952	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1350726_9	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1350726_9	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-1350726_9	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1350726_10	K08640	75.0	1.5e-21	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1350726_10	phrog_2649	53.2	0.0000000000000022	endolysin	lysis
UniRef90	UHGV-1350726_10	UniRef90_R5EEQ7	142.0	2.24e-38	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-1350726_10	1463917.JODC01000018_gene2903	62.4	0.0000000104	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-1350726_10	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1350726_10	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1350726_10	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1350726_10	PF05951,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_11	phrog_937	54.9	0.0000000000000018	hemolysin	other
eggNOG-mapper	UHGV-1350726_11	1007096.BAGW01000017_gene814	61.6	0.0000000000443	N/A	N/A
PHROG	UHGV-1350726_12	phrog_10091	107.0	1.4e-31	holin	lysis
UniRef90	UHGV-1350726_12	UniRef90_A0A374DX82	131.0	3.44e-38	Phage holin	N/A
eggNOG-mapper	UHGV-1350726_12	97139.C824_05950	119.0	2.9e-34	Bacteriophage holin	N/A
Pfam	UHGV-1350726_12	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1350726_12	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1350726_12	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_12	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_13	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1350726_17	K06400	363.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1350726_17	phrog_95	355.8	0	integrase	integration and excision
UniRef90	UHGV-1350726_17	UniRef90_UPI00164E9A6A	489.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1350726_17	718252.FP2_29980	336.0	0	N/A	N/A
Pfam	UHGV-1350726_17	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1350726_17	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1350726_17	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1350726_17	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1350726_17	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_18	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1350726_21	UniRef90_R5EEH6	68.2	0.00000000000141	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1350726_21	1378168.N510_01712	66.2	0.0000000000152	N/A	N/A
structural_annotation	UHGV-1350726_21	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_22	phrog_8	42.2	0.000000000019	transcriptional regulator	transcription regulation
Pfam	UHGV-1350726_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1350726_22	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_25	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_29	phrog_434	304.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350726_29	UniRef90_UPI00164B76E0	275.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1350726_29	1121344.JHZO01000003_gene985	276.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1350726_29	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1350726_29	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1350726_29	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1350726_29	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1350726_30	K07455	177.4	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1350726_30	phrog_148	176.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350726_30	UniRef90_UPI0018C50A8E	329.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1350726_30	1196028.ALEF01000043_gene487	218.0	0	RecT family	N/A
Pfam	UHGV-1350726_30	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1350726_30	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1350726_30	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1350726_30	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1350726_31	K03111	137.1	2e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1350726_31	phrog_44	145.7	2.60642e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350726_31	UniRef90_A0A645AIU7	167.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1350726_31	693746.OBV_12860	166.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1350726_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1350726_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1350726_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1350726_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1350726_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_32	phrog_190	122.1	3.8e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350726_32	UniRef90_A0A3R6WN18	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-1350726_32	1236514.BAKL01000051_gene3708	99.8	1.54e-25	N/A	N/A
Pfam	UHGV-1350726_32	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1350726_32	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_33	phrog_16304	67.6	1.7e-19	N/A	unknown function
UniRef90	UHGV-1350726_33	UniRef90_UPI001D074B07	100.0	2.1e-22	N/A	N/A
eggNOG-mapper	UHGV-1350726_33	690850.Desaf_3579	90.5	1.44e-18	N/A	N/A
AcrCatalog	UHGV-1350726_33	cluster_14472	70.5	3.38e-16	NA	N/A
Pfam	UHGV-1350726_33	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1350726_33	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_34	phrog_9804	149.4	1.82169e-44	N/A	unknown function
UniRef90	UHGV-1350726_34	UniRef90_UPI0018AA0ECD	175.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1350726_34	1121344.JHZO01000003_gene981	164.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1350726_34	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1350726_34	PF11417	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1350726_35	1123263.AUKY01000096_gene1822	96.7	1.6e-21	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-1350726_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1350726_36	phrog_111	155.7	0	DNA methyltransferase	other
UniRef90	UHGV-1350726_36	UniRef90_A0A2V2F8D8	213.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-1350726_36	445972.ANACOL_03344	200.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-1350726_36	oMTase_00015	177.5	0	orphan methyltransferase	RM
Pfam	UHGV-1350726_36	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-1350726_36	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_38	phrog_599	53.3	0.0000000000000066	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1350726_38	UniRef90_A0A3R6FRA8	67.8	0.000000000000454	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-1350726_38	1235790.C805_00069	63.2	0.00000000000372	Restriction alleviation protein Lar	N/A
Pfam	UHGV-1350726_38	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1350726_38	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1350726_38	PF13211	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_39	phrog_3136	124.3	5.3e-37	N/A	unknown function
UniRef90	UHGV-1350726_39	UniRef90_A0A3D0HBD2	130.0	4.9e-35	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1350726_39	1120980.JQKH01000091_gene1769	53.1	0.00000109	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1350726_39	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1350726_39	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_45	PF09889,MF_00649,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_47	phrog_606	50.4	0.000000000000019	terminase small subunit	head and packaging
UniRef90	UHGV-1350726_47	UniRef90_UPI001C012D23	170.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1350726_47	931276.Cspa_c57180	66.6	0.0000000000147	DNA-packaging protein gp3	N/A
Pfam	UHGV-1350726_47	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1350726_47	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-1350726_49	UniRef90_W1I3U4	71.6	0.0000000000000138	Uncultured bacterium extrachromosomal DNA RGI00970	N/A
eggNOG-mapper	UHGV-1350726_52	1095770.CAHE01000085_gene1290	57.8	0.0000000064	N/A	N/A
KOfam	UHGV-1350726_53	K06400	204.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1350726_53	phrog_95	203.0	0	integrase	integration and excision
UniRef90	UHGV-1350726_53	UniRef90_A0A3D4G6V8	260.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1350726_53	697329.Rumal_3466	229.0	0	resolvase	N/A
Pfam	UHGV-1350726_53	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1350726_53	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1350726_53	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1350726_53	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_54	PF19818,TIGR03931	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1350726_55	742738.HMPREF9460_00886	70.9	0.000000000000909	N/A	N/A
structural_annotation	UHGV-1350726_55	TIGR03826	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_59	phrog_1233	82.1	8e-24	N/A	unknown function
eggNOG-mapper	UHGV-1350726_59	1232443.BAIA02000078_gene33	119.0	2.24e-33	N/A	N/A
PHROG	UHGV-1350726_60	phrog_38	181.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1350726_60	UniRef90_A0A810QA10	641.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1350726_60	1298920.KI911353_gene2682	462.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1350726_60	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1350726_60	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350726_60	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-1350726_62	K07741	125.4	1.1e-36	antB; anti-repressor protein	N/A
PHROG	UHGV-1350726_62	phrog_130	275.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1350726_62	UniRef90_UPI00193BAC60	327.0	0	phage antirepressor	N/A
eggNOG-mapper	UHGV-1350726_62	573061.Clocel_3580	311.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1350726_62	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1350726_62	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1350726_62	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1350726_62	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_64	phrog_64	189.2	0	portal protein	head and packaging
UniRef90	UHGV-1350726_64	UniRef90_UPI001D08CF6B	647.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1350726_64	1123263.AUKY01000015_gene1609	402.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1350726_64	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1350726_64	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_67	phrog_544	78.6	4e-23	major head protein	head and packaging
UniRef90	UHGV-1350726_67	UniRef90_A0A6N3FT63	131.0	8.9e-33	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-1350726_67	428127.EUBDOL_01555	232.0	0	N/A	N/A
structural_annotation	UHGV-1350726_67	PF06673,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1350726_68	UniRef90_UPI00164E20D5	146.0	1.42932e-43	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1350726_68	1298920.KI911353_gene2658	49.7	0.00000268	N/A	N/A
Pfam	UHGV-1350726_68	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1350726_68	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1350726_69	1121866.AUGK01000003_gene1432	69.7	0.000000000000179	N/A	N/A
eggNOG-mapper	UHGV-1350726_70	476272.RUMHYD_01963	83.2	1.04e-17	N/A	N/A
structural_annotation	UHGV-1350726_71	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1350726_72	phrog_158	49.0	0.0000000000001	major tail protein	tail
UniRef90	UHGV-1350726_72	UniRef90_A0A1C6L0H9	199.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1350726_72	1232453.BAIF02000058_gene1634	90.9	1.36e-21	N/A	N/A
structural_annotation	UHGV-1350726_72	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1350726_73	UniRef90_A0A847YX95	96.3	1.41e-23	N/A	N/A
eggNOG-mapper	UHGV-1350726_73	469596.HMPREF9488_01311	74.3	9.69e-16	N/A	N/A
Pfam	UHGV-1350726_73	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1350726_73	PF16478	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1350726	Yes	44,459	51	61	1
UHGV-0204832	No	44,454	51	61	1