vOTU vOTU-143341

vOTU: vOTU-143341

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-143341
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-09088 → vOTU-143341
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0029199
Biosample ID	SAMEA4765835
Genome length (bp)	22,350 bps
CheckV completeness	52.92% (Medium-quality)
CDS count	32
CDS density	93.38%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	380	Host agreement	95
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0029199_1	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_2	phrog_544	103.5	1.9e-30	major head protein	head and packaging
UniRef90	UHGV-0029199_2	UniRef90_A0A1C6B5R0	315.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0029199_2	476272.RUMHYD_01776	283.0	0	N/A	N/A
structural_annotation	UHGV-0029199_2	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029199_4	UniRef90_A0A844DHJ8	119.0	2.31e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0029199_4	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029199_5	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_6	phrog_885	70.0	2.7e-20	major tail protein	tail
eggNOG-mapper	UHGV-0029199_6	1111121.HMPREF1247_0789	174.0	0	N/A	N/A
structural_annotation	UHGV-0029199_6	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_9	phrog_28775	153.5	1.4013e-45	tail length tape measure protein	tail
UniRef90	UHGV-0029199_9	UniRef90_A0A6N7TLD3	892.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0029199_9	1492737.FEM08_12070	137.0	8.63e-31	tape measure	N/A
Pfam	UHGV-0029199_9	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0029199_9	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0029199_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0029199_9	PF20155,MF_04138,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029199_10	UniRef90_UPI001D5BF297	101.0	1.56e-22	mtfA protein	N/A
eggNOG-mapper	UHGV-0029199_10	1111121.HMPREF1247_1241	114.0	3.31e-28	N/A	N/A
structural_annotation	UHGV-0029199_10	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_11	phrog_3558	210.6	0	tail protein	tail
UniRef90	UHGV-0029199_11	UniRef90_UPI001C01D15B	154.0	2.52e-36	phage tail protein	N/A
eggNOG-mapper	UHGV-0029199_11	1235799.C818_04233	81.3	0.00000000000018	Prophage endopeptidase tail	N/A
Pfam	UHGV-0029199_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0029199_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0029199_11	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0029199_11	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_13	phrog_10993	263.2	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0029199_13	UniRef90_UPI00082DBDF2	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029199_13	1121334.KB911071_gene1970	194.0	0	N/A	N/A
Pfam	UHGV-0029199_13	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0029199_13	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0029199_14	K07273	156.9	0	acm; lysozyme	N/A
PHROG	UHGV-0029199_14	phrog_291	116.2	3.1e-34	endolysin	lysis
UniRef90	UHGV-0029199_14	UniRef90_A0A564U0D3	365.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0029199_14	718252.FP2_04890	220.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0029199_14	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0029199_14	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0029199_14	PF01183,NF003812,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_16	phrog_15303	116.3	1.2e-34	N/A	unknown function
Pfam	UHGV-0029199_16	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
eggNOG-mapper	UHGV-0029199_17	411483.FAEPRAA2165_00757	163.0	5.81959e-42	N/A	N/A
structural_annotation	UHGV-0029199_17	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029199_21	742738.HMPREF9460_04058	66.2	0.000000000212	N/A	N/A
KOfam	UHGV-0029199_22	K23779	60.2	5e-17	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0029199_22	phrog_1373	44.0	0.000000000002	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0029199_22	944479.JQLX01000018_gene150	55.1	0.000000444	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0029199_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029199_22	COG0662	N/A	N/A	Mannose-6-phosphate isomerase, cupin superfamily	N/A
structural_annotation	UHGV-0029199_22	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0029199_24	phrog_3754	101.4	7.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0029199_24	1235790.C805_00054	108.0	7.45e-29	N/A	N/A
PHROG	UHGV-0029199_25	phrog_21718	124.0	8.9e-37	N/A	unknown function
eggNOG-mapper	UHGV-0029199_25	397290.C810_05210	105.0	1.18e-26	N/A	N/A
PHROG	UHGV-0029199_26	phrog_22984	79.4	2.3e-23	N/A	unknown function
PHROG	UHGV-0029199_27	phrog_16490	153.4	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0029199_27	397290.C810_05212	130.0	9.57e-34	N/A	N/A
PHROG	UHGV-0029199_28	phrog_20016	195.0	0	N/A	unknown function
UniRef90	UHGV-0029199_28	UniRef90_A0A285PT46	209.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0029199_28	1226322.HMPREF1545_00077	176.0	0	N/A	N/A
structural_annotation	UHGV-0029199_28	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029199_29	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0029199_31	K14059	139.0	5.19994e-41	int; integrase	N/A
PHROG	UHGV-0029199_31	phrog_1	165.0	0	integrase	integration and excision
UniRef90	UHGV-0029199_31	UniRef90_A0A6N7TNQ4	737.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0029199_31	411471.SUBVAR_05137	260.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0029199_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0029199_31	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0029199_31	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0029199	Yes	22,350	56	53	1