vOTU vOTU-144364

vOTU: vOTU-144364

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-144364
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00096 → vGENUS-02714 → vOTU-144364
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1393535
Biosample ID	N/A
Genome length (bp)	29,538 bps
CheckV completeness	77.51% (Medium-quality)
CDS count	49
CDS density	93.84%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	34	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	19	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 77.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1393535_1	K14059	97.6	2.1e-28	int; integrase	N/A
PHROG	UHGV-1393535_1	phrog_37757	107.4	5.6e-32	N/A	unknown function
UniRef90	UHGV-1393535_1	UniRef90_U4KJ82	495.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1393535_1	1282664.H354_06481	494.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1393535_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
COG	UHGV-1393535_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-1393535_2	phrog_27136	481.7	0	N/A	unknown function
UniRef90	UHGV-1393535_2	UniRef90_A0A1F0TDC2	369.0	0	Zinc-binding protein	N/A
eggNOG-mapper	UHGV-1393535_2	1282664.H354_06486	380.0	0	Short C-terminal domain	N/A
PHROG	UHGV-1393535_3	phrog_1516	238.9	0	N/A	unknown function
UniRef90	UHGV-1393535_3	UniRef90_G6C9L7	481.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1393535_3	420890.LCGL_1426	100.0	2.56e-22	N/A	N/A
Pfam	UHGV-1393535_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1393535_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1393535_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_4	phrog_8	83.3	4e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1393535_4	UniRef90_F9LWE8	246.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1393535_4	1000588.HMPREF9965_1729	246.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1393535_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1393535_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1393535_4	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_5	phrog_1337	51.3	0.000000000000017	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_5	UniRef90_A0A1S1CV66	124.0	5.71e-36	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1393535_5	1000588.HMPREF9965_1728	126.0	8.17e-38	N/A	N/A
structural_annotation	UHGV-1393535_5	PF21291,TIGR04111,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_6	phrog_2273	150.3	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1393535_6	UniRef90_Q7Y4K8	164.0	0	Gp16	N/A
PHROG	UHGV-1393535_7	phrog_2648	114.8	2.3e-34	N/A	unknown function
UniRef90	UHGV-1393535_7	UniRef90_A0A081R6P3	91.3	5.46e-23	N/A	N/A
PHROG	UHGV-1393535_8	phrog_5054	145.2	8.96831e-44	N/A	unknown function
UniRef90	UHGV-1393535_8	UniRef90_F9LWE4	115.0	1.3e-32	Conserved domain protein	N/A
PHROG	UHGV-1393535_9	phrog_2044	103.8	7.1e-31	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1393535_9	1461246.X2KU06_9VIRU	136.0	3.09e-41	N/A	N/A
structural_annotation	UHGV-1393535_9	NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_10	phrog_1891	277.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_10	UniRef90_A0A098ZC65	496.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1393535_10	1282664.H354_06526	490.0	0	HNH endonuclease	N/A
Pfam	UHGV-1393535_10	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1393535_10	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_11	phrog_253	155.3	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_11	UniRef90_A0A0E7DV90	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393535_11	1282664.H354_06531	289.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-1393535_11	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1393535_11	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_12	phrog_1341	128.0	3.1e-38	N/A	unknown function
UniRef90	UHGV-1393535_12	UniRef90_A0A139QHN5	126.0	2.38e-35	N/A	N/A
PHROG	UHGV-1393535_13	phrog_1981	116.7	2.1e-34	N/A	unknown function
UniRef90	UHGV-1393535_13	UniRef90_A0A4U9Z775	228.0	0	N/A	N/A
structural_annotation	UHGV-1393535_13	PF02075,MF_00034,NF000711,COG0816	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_14	phrog_62	114.8	4.8e-34	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_14	UniRef90_A5LQ26	760.0	0	Helicase ATP-binding domain-containing protein	N/A
Pfam	UHGV-1393535_14	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
COG	UHGV-1393535_14	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1393535_14	PF04851,PF16203,MF_01821,TIGR04095,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_15	phrog_2486	130.7	4.4e-39	N/A	unknown function
PHROG	UHGV-1393535_16	phrog_124	153.7	1.4013e-45	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_16	UniRef90_A0A141E0U5	505.0	0	AAA_24 domain protein	N/A
eggNOG-mapper	UHGV-1393535_16	537874.B3GVY5_9CAUD	450.0	0	AAA domain	N/A
Pfam	UHGV-1393535_16	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1393535_16	PF13479,MF_00348,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_17	phrog_378	94.9	9.9e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_17	UniRef90_A0A7X2X3A2	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393535_17	537874.B3GVY6_9CAUD	257.0	0	N/A	N/A
structural_annotation	UHGV-1393535_17	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_18	phrog_13710	99.3	1.3e-29	N/A	unknown function
PHROG	UHGV-1393535_19	phrog_695	227.5	0	DNA polymerase/primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_19	UniRef90_A0A4D6ARQ8	524.0	0	Replication protein	N/A
eggNOG-mapper	UHGV-1393535_19	1321372.AQQB01000060_gene51	483.0	0	N/A	N/A
Pfam	UHGV-1393535_19	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-1393535_19	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-1393535_19	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1393535_19	PF09250,PF08708,NF040561,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_20	phrog_1313	504.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1393535_20	UniRef90_A0A064C048	852.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1393535_20	1461246.X2KU14_9VIRU	848.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1393535_20	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
structural_annotation	UHGV-1393535_20	PF05272,MF_04000,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_21	phrog_1489	94.7	5.3e-28	N/A	unknown function
UniRef90	UHGV-1393535_21	UniRef90_A0A4V0BR58	94.7	9.74e-25	N/A	N/A
structural_annotation	UHGV-1393535_21	PF13773	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_22	phrog_14577	117.9	2.9e-35	N/A	unknown function
structural_annotation	UHGV-1393535_22	PF11305,MF_01360	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_23	phrog_33566	180.3	0	N/A	unknown function
UniRef90	UHGV-1393535_23	UniRef90_A0A139Q9N5	162.0	0	N/A	N/A
PHROG	UHGV-1393535_25	phrog_884	102.5	2.1e-30	N/A	unknown function
UniRef90	UHGV-1393535_25	UniRef90_Q7Y4J7	154.0	0	Gp27	N/A
eggNOG-mapper	UHGV-1393535_25	768726.HMPREF9178_1075	120.0	1.91e-33	N/A	N/A
Pfam	UHGV-1393535_25	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1393535_25	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_26	phrog_98	117.0	1e-34	N/A	unknown function
UniRef90	UHGV-1393535_26	UniRef90_A0A0E2QIM6	201.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1393535_26	1095737.HMPREF1110_1215	77.8	1.83e-16	YopX protein	N/A
Pfam	UHGV-1393535_26	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1393535_26	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1393535_26	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_27	phrog_2169	107.9	3.6e-32	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1393535_27	UniRef90_A0A116KZP5	56.6	0.0000000279	Phage membrane protein	N/A
eggNOG-mapper	UHGV-1393535_27	1139219.I569_00225	51.6	0.00000064	N/A	N/A
PHROG	UHGV-1393535_28	phrog_36	84.7	1.2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1393535_28	UniRef90_A0A0Z8CIW7	248.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393535_28	1321372.AQQB01000060_gene55	126.0	1.89e-35	N/A	N/A
Pfam	UHGV-1393535_28	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1393535_28	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1393535_29	K07474	129.0	6.8e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1393535_29	phrog_51	147.3	7.14662e-44	terminase small subunit	head and packaging
UniRef90	UHGV-1393535_29	UniRef90_A0A1X0WMZ4	311.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1393535_29	1282664.H354_06616	313.0	0	terminase small subunit	N/A
Pfam	UHGV-1393535_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1393535_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1393535_29	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1393535_30	K06909	98.4	9.8e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1393535_30	phrog_2	67.7	2.6e-19	terminase large subunit	head and packaging
UniRef90	UHGV-1393535_30	UniRef90_A0A139R8G3	910.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1393535_30	1282664.H354_06621	919.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1393535_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1393535_30	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_31	phrog_533	276.3	0	portal protein	head and packaging
UniRef90	UHGV-1393535_31	UniRef90_A0A139R8J5	994.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1393535_31	1282664.H354_06626	988.0	0	N/A	N/A
Pfam	UHGV-1393535_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1393535_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_32	phrog_25639	65.0	9.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1393535_32	1282664.H354_06631	123.0	1.8e-36	N/A	N/A
PHROG	UHGV-1393535_33	phrog_581	234.8	0	minor head protein	head and packaging
UniRef90	UHGV-1393535_33	UniRef90_A0A139R8H5	1137.0	0	Phage putative head morphogenesis protein, SPP1 gp7 family	N/A
eggNOG-mapper	UHGV-1393535_33	1282664.H354_06636	1140.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1393535_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1393535_33	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-1393535_34	UniRef90_A0A8A6PRX9	121.0	2.11e-34	Peptidase	N/A
eggNOG-mapper	UHGV-1393535_34	1282664.H354_06641	173.0	0	N/A	N/A
PHROG	UHGV-1393535_35	phrog_419	108.8	6e-32	N/A	unknown function
UniRef90	UHGV-1393535_35	UniRef90_A0A060QMU0	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393535_35	1123312.KB904569_gene346	140.0	1.69978e-42	N/A	N/A
structural_annotation	UHGV-1393535_35	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_36	phrog_2303	114.4	1.1e-33	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1393535_36	1282664.H354_06656	350.0	0	N/A	N/A
PHROG	UHGV-1393535_37	phrog_422	342.0	0	major head protein	head and packaging
UniRef90	UHGV-1393535_37	UniRef90_A0A4V0BQY3	591.0	0	Main capsid protein Gp34-like protein	N/A
eggNOG-mapper	UHGV-1393535_37	1282664.H354_06661	591.0	0	N/A	N/A
structural_annotation	UHGV-1393535_37	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_39	phrog_541	73.2	3.4e-21	head-tail adaptor	connector
eggNOG-mapper	UHGV-1393535_39	1282664.H354_06671	244.0	0	N/A	N/A
PHROG	UHGV-1393535_40	phrog_8710	124.6	3.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-1393535_40	1282664.H354_06676	225.0	0	N/A	N/A
structural_annotation	UHGV-1393535_40	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_41	phrog_556	49.1	0.000000000000091	minor head protein	head and packaging
UniRef90	UHGV-1393535_41	UniRef90_UPI0018E07468	164.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1393535_41	1282664.H354_06681	256.0	0	N/A	N/A
PHROG	UHGV-1393535_42	phrog_2595	90.8	1.2e-26	head-tail connector protein	connector
UniRef90	UHGV-1393535_42	UniRef90_UPI001D0627B3	135.0	2.95e-38	minor capsid protein	N/A
eggNOG-mapper	UHGV-1393535_42	1282664.H354_06686	272.0	0	N/A	N/A
Pfam	UHGV-1393535_42	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1393535_42	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_43	phrog_820	120.1	1.2e-35	major tail protein	tail
eggNOG-mapper	UHGV-1393535_43	1282664.H354_06691	299.0	0	N/A	N/A
structural_annotation	UHGV-1393535_43	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_45	phrog_8300	96.0	2.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-1393535_45	1282664.H354_06701	180.0	0	N/A	N/A
structural_annotation	UHGV-1393535_45	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_46	phrog_8355	102.3	1.8e-30	N/A	unknown function
UniRef90	UHGV-1393535_46	UniRef90_UPI001924D062	125.0	8.17e-36	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1393535_46	1282664.H354_06706	148.0	0	N/A	N/A
Pfam	UHGV-1393535_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-1393535_47	phrog_1535	393.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1393535_47	UniRef90_A0A139R8H3	1553.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1393535_47	1282664.H354_06711	1529.0	0	Phage-related minor tail protein	N/A
COG	UHGV-1393535_47	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1393535_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_48	phrog_1194	62.8	3.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1393535_48	1282664.H354_06716	214.0	0	N/A	N/A
structural_annotation	UHGV-1393535_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1393535_49	phrog_6616	104.6	6.4e-31	tail protein	tail
eggNOG-mapper	UHGV-1393535_49	1282664.H354_06721	440.0	0	outer membrane autotransporter barrel domain protein	N/A
COG	UHGV-1393535_49	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1393535	Yes	29,538	39	78	1