vOTU vOTU-144473

vOTU: vOTU-144473

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-144473
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01365 → vGENUS-11247 → vOTU-144473
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0349226
Biosample ID	SAMN07549043
Genome length (bp)	24,293 bps
CheckV completeness	63.32% (Medium-quality)
CDS count	33
CDS density	95.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	31	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0349226_1	483218.BACPEC_01141	93.2	3.7e-17	N/A	N/A
PHROG	UHGV-0349226_2	phrog_6616	540.3	0	tail protein	tail
UniRef90	UHGV-0349226_2	UniRef90_A0A0J1FXD9	513.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0349226_2	476272.RUMHYD_01992	317.0	0	N/A	N/A
structural_annotation	UHGV-0349226_2	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_3	phrog_1194	70.7	2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0349226_3	33035.JPJF01000093_gene2242	150.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0349226_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_4	phrog_1535	270.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0349226_4	UniRef90_A0A1C5PIN9	888.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0349226_4	33035.JPJF01000093_gene2243	496.0	0	phage tail tape measure protein	N/A
COG	UHGV-0349226_4	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0349226_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_5	phrog_8355	112.3	1.2e-33	N/A	unknown function
UniRef90	UHGV-0349226_5	UniRef90_UPI001F1300CC	258.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0349226_5	1280692.AUJL01000027_gene2152	111.0	5.13e-30	N/A	N/A
Pfam	UHGV-0349226_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0349226_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_6	phrog_8300	106.1	2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0349226_6	33035.JPJF01000093_gene2245	115.0	1.87e-32	N/A	N/A
structural_annotation	UHGV-0349226_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_7	phrog_820	107.1	9.5e-32	major tail protein	tail
eggNOG-mapper	UHGV-0349226_7	33035.JPJF01000093_gene2246	223.0	0	N/A	N/A
structural_annotation	UHGV-0349226_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_8	phrog_2595	80.2	2.2e-23	head-tail connector protein	connector
UniRef90	UHGV-0349226_8	UniRef90_UPI00164BAA81	275.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0349226_8	1282664.H354_06686	105.0	1.83e-27	N/A	N/A
Pfam	UHGV-0349226_8	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0349226_8	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_9	phrog_556	60.8	2.2e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0349226_9	742740.HMPREF9474_03509	161.0	0	N/A	N/A
PHROG	UHGV-0349226_10	phrog_8710	146.4	6.44597e-44	N/A	unknown function
eggNOG-mapper	UHGV-0349226_10	742740.HMPREF9474_03508	158.0	0	N/A	N/A
structural_annotation	UHGV-0349226_10	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_11	phrog_541	89.6	2.7e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0349226_11	33035.JPJF01000093_gene2250	170.0	0	N/A	N/A
PHROG	UHGV-0349226_12	phrog_1378	75.4	6.2e-22	N/A	unknown function
UniRef90	UHGV-0349226_12	UniRef90_A0A0B3VH35	66.6	0.000000000000854	HALZ domain-containing protein	N/A
eggNOG-mapper	UHGV-0349226_12	1280692.AUJL01000027_gene2159	68.6	0.0000000000000231	N/A	N/A
PHROG	UHGV-0349226_13	phrog_422	341.6	0	major head protein	head and packaging
UniRef90	UHGV-0349226_13	UniRef90_A0A3R6PT58	509.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0349226_13	33035.JPJF01000093_gene2252	509.0	0	N/A	N/A
structural_annotation	UHGV-0349226_13	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_14	phrog_2303	153.0	1.4013e-45	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0349226_14	1304866.K413DRAFT_0806	174.0	0	N/A	N/A
PHROG	UHGV-0349226_15	phrog_355	64.9	1.2e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0349226_15	UniRef90_A0A415G5B2	147.0	5.32493e-44	N/A	N/A
eggNOG-mapper	UHGV-0349226_15	1256908.HMPREF0373_00479	139.0	1.34006e-41	N/A	N/A
Pfam	UHGV-0349226_15	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0349226_15	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_17	phrog_581	253.2	0	minor head protein	head and packaging
UniRef90	UHGV-0349226_17	UniRef90_UPI00164A2DDC	1114.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0349226_17	33035.JPJF01000093_gene2255	489.0	0	N/A	N/A
Pfam	UHGV-0349226_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0349226_17	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0349226_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_18	phrog_533	284.4	0	portal protein	head and packaging
UniRef90	UHGV-0349226_18	UniRef90_UPI001F14233C	1106.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0349226_18	742740.HMPREF9474_03501	539.0	0	N/A	N/A
structural_annotation	UHGV-0349226_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0349226_19	K06909	96.6	3.6e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0349226_19	phrog_10250	44.4	0.00000000000016	N/A	unknown function
UniRef90	UHGV-0349226_19	UniRef90_UPI00164A3891	952.0	0	terminase	N/A
eggNOG-mapper	UHGV-0349226_19	394503.Ccel_3050	653.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0349226_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0349226_19	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_20	phrog_309	197.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0349226_20	UniRef90_UPI00164CAAF8	280.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0349226_20	742733.HMPREF9469_01828	188.0	0	transposase activity	N/A
Pfam	UHGV-0349226_20	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0349226_20	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0349226_20	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_21	phrog_36	65.3	1.2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0349226_21	UniRef90_UPI001F14539B	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0349226_21	1235800.C819_02243	190.0	0	N/A	N/A
Pfam	UHGV-0349226_21	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0349226_21	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349226_22	PF09889,COG4068	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0349226_25	411459.RUMOBE_01111	75.9	0.00000000000000172	N/A	N/A
KOfam	UHGV-0349226_27	K00558	229.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0349226_27	phrog_116	268.4	0	DNA methyltransferase	other
UniRef90	UHGV-0349226_27	UniRef90_A0A1Q9J771	885.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0349226_27	1235800.C819_02255	702.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0349226_27	MTase_II_00020	115.2	8.5e-38	Type II methyltransferase	RM
Pfam	UHGV-0349226_27	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0349226_27	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0349226_27	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0349226_28	K00390	41.4	1.9e-23	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0349226_28	phrog_424	83.4	1.7e-24	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0349226_28	UniRef90_A0A316M8X6	696.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0349226_28	1235800.C819_02256	613.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0349226_28	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0349226_28	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0349226_28	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0349226_31	phrog_20593	60.6	1.8e-17	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0349226	Yes	24,293	42	63	1