vOTU vOTU-144940

vOTU: vOTU-144940

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-144940
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vOTU-144940
Host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1477994
Biosample ID	SAMEA2737951
Genome length (bp)	29,726 bps
CheckV completeness	65.17% (Medium-quality)
CDS count	52
CDS density	92.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1477994_1	phrog_579	40.1	0.000000000057	N/A	unknown function
UniRef90	UHGV-1477994_1	UniRef90_UPI0018C6B22F	82.8	1.09e-18	N/A	N/A
eggNOG-mapper	UHGV-1477994_1	1123511.KB905868_gene168	79.7	2.97e-18	N/A	N/A
Pfam	UHGV-1477994_1	PF10844	N/A	N/A	N/A	DUF2577
PHROG	UHGV-1477994_2	phrog_400	299.7	0	tail protein	tail
UniRef90	UHGV-1477994_2	UniRef90_A0A0X8KCS4	630.0	0	Hydrolase	N/A
eggNOG-mapper	UHGV-1477994_2	1123511.KB905868_gene169	454.0	0	PFAM Phage late control gene D protein (GPD)	N/A
COG	UHGV-1477994_2	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
structural_annotation	UHGV-1477994_2	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_3	phrog_380	162.2	0	endolysin	lysis
UniRef90	UHGV-1477994_3	UniRef90_A0A4R1PW24	201.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1477994_3	1123511.KB905868_gene170	326.0	0	PFAM LysM domain	N/A
COG	UHGV-1477994_3	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-1477994_3	PF21821,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_4	phrog_1068	451.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1477994_4	UniRef90_A0A120KRL1	1173.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1477994_4	1123511.KB905868_gene171	340.0	0	tape measure	N/A
Pfam	UHGV-1477994_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1477994_4	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1477994_4	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1477994_4	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_5	phrog_2546	100.6	1.6e-29	N/A	unknown function
UniRef90	UHGV-1477994_5	UniRef90_UPI001D08FD8F	68.6	0.0000000000243	zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1477994_5	768710.DesyoDRAFT_5205	65.1	0.0000000000412	PFAM Tellurite resistance protein TerB	N/A
COG	UHGV-1477994_5	COG3793	N/A	N/A	Tellurite resistance protein TerB	N/A
structural_annotation	UHGV-1477994_5	PF13240,TIGR04165	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_6	phrog_389	126.1	1.7e-37	tail protein XkdN-like	tail
UniRef90	UHGV-1477994_6	UniRef90_A0A1M4V5L2	173.0	0	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
eggNOG-mapper	UHGV-1477994_6	1123511.KB905868_gene173	172.0	0	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-1477994_6	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
PHROG	UHGV-1477994_7	phrog_365	178.7	0	tail protein	tail
UniRef90	UHGV-1477994_7	UniRef90_A0A1M4V5K6	253.0	0	Phage tail tube protein	N/A
eggNOG-mapper	UHGV-1477994_7	1123511.KB905868_gene174	190.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1477994_7	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-1477994_7	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_8	phrog_279	331.5	0	tail sheath	tail
UniRef90	UHGV-1477994_8	UniRef90_A0A0X8KA29	871.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1477994_8	1123511.KB905868_gene175	648.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-1477994_8	PF17481	N/A	N/A	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
Pfam	UHGV-1477994_8	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-1477994_8	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-1477994_8	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_9	phrog_966	47.5	0.0000000000002	N/A	unknown function
PHROG	UHGV-1477994_10	phrog_525	133.5	9.79999e-40	N/A	unknown function
UniRef90	UHGV-1477994_10	UniRef90_F2JK36	126.0	1.42e-34	N/A	N/A
eggNOG-mapper	UHGV-1477994_10	1123511.KB905868_gene177	144.0	2.73954e-42	N/A	N/A
Pfam	UHGV-1477994_10	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-1477994_10	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_11	phrog_5	44.2	0.0000000000037	tail completion or Neck1 protein	connector
UniRef90	UHGV-1477994_11	UniRef90_UPI0015F4E1CA	172.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1477994_11	1123511.KB905868_gene178	164.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1477994_11	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1477994_11	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_12	phrog_615	103.4	1.2e-30	head-tail adaptor	connector
UniRef90	UHGV-1477994_12	UniRef90_UPI001C0FD815	95.9	3.65e-23	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-1477994_12	1123511.KB905868_gene179	98.6	6.68e-25	N/A	N/A
structural_annotation	UHGV-1477994_12	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_13	phrog_132	47.7	0.00000000000021	head-tail adaptor	connector
UniRef90	UHGV-1477994_13	UniRef90_UPI001CA4A3AD	53.5	0.000000994	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1477994_13	1151292.QEW_3499	59.3	0.00000000161	N/A	N/A
structural_annotation	UHGV-1477994_13	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_15	phrog_422	324.7	0	major head protein	head and packaging
UniRef90	UHGV-1477994_15	UniRef90_F5RMR4	492.0	0	Lj928 prophage protein	N/A
eggNOG-mapper	UHGV-1477994_15	888060.HMPREF9081_1550	492.0	0	N/A	N/A
structural_annotation	UHGV-1477994_15	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_16	phrog_194	140.7	9.99967e-42	head scaffolding protein	head and packaging
UniRef90	UHGV-1477994_16	UniRef90_D3LSS9	111.0	1.21e-27	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1477994_16	699218.HMPREF0889_1452	111.0	2.03e-28	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1477994_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1477994_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_18	phrog_115	385.5	0	minor head protein	head and packaging
UniRef90	UHGV-1477994_18	UniRef90_A0A109WD03	667.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1477994_18	642492.Clole_2763	304.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1477994_18	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1477994_18	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1477994_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1477994_18	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_19	phrog_64	312.1	0	portal protein	head and packaging
UniRef90	UHGV-1477994_19	UniRef90_A0A6L6TPX1	511.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1477994_19	546273.VEIDISOL_00711	449.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1477994_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1477994_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_20	phrog_30251	787.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1477994_20	UniRef90_A0A0X8KA54	917.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1477994_20	1499683.CCFF01000014_gene3915	706.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1477994_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1477994_20	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1477994_20	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1477994_20	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1477994_21	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-1477994_22	K00571	190.7	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1477994_22	phrog_67	192.4	0	DNA methyltransferase	other
UniRef90	UHGV-1477994_22	UniRef90_A0A420W5G5	263.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1477994_22	1217656.F964_00563	244.0	0	DNA methylase	N/A
PADLOC	UHGV-1477994_22	MTase_II_00037	142.3	0	Type II methyltransferase	RM
Pfam	UHGV-1477994_22	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1477994_22	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1477994_22	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1477994_23	1200557.JHWV01000001_gene279	107.0	2.51e-27	N/A	N/A
structural_annotation	UHGV-1477994_23	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1477994_26	K03798	110.0	9.8e-33	ftsH, hflB; cell division protease FtsH [EC:3.4.24.-]	N/A
PHROG	UHGV-1477994_26	phrog_3757	175.1	0	N/A	unknown function
UniRef90	UHGV-1477994_26	UniRef90_UPI001D11E1A3	238.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1477994_26	768710.DesyoDRAFT_1087	204.0	0	ATPase family associated with various cellular activities (AAA)	N/A
PADLOC	UHGV-1477994_26	IetA_00002	163.8	0	NA	ietAS
Pfam	UHGV-1477994_26	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
COG	UHGV-1477994_26	COG0464	N/A	N/A	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	N/A
structural_annotation	UHGV-1477994_26	PF00004,MF_00553,TIGR01242,COG1222	N/A	N/A	N/A	N/A
KOfam	UHGV-1477994_27	K03111	138.8	5.60001e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1477994_27	phrog_44	142.3	2.49992e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477994_27	UniRef90_A0A1B3X2R0	207.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1477994_27	864563.HMPREF9166_1268	194.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1477994_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1477994_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1477994_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1477994_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1477994_27	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_30	phrog_59	128.5	2.8e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477994_30	UniRef90_A0A3B8SWR8	114.0	1.4e-28	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1477994_30	357276.EL88_11520	94.4	6.7e-22	HNH endonuclease domain protein	N/A
PADLOC	UHGV-1477994_30	HEase_00016	101.0	2.1e-29	homing endonuclease	RM
Pfam	UHGV-1477994_30	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1477994_30	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1477994_30	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-1477994_31	K00558	213.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1477994_31	phrog_116	258.7	0	DNA methyltransferase	other
UniRef90	UHGV-1477994_31	UniRef90_A0A0X8KA36	530.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1477994_31	585503.HMPREF7545_1724	488.0	0	Cytosine-specific methyltransferase	N/A
PADLOC	UHGV-1477994_31	oMTase_00004	235.5	0	orphan methyltransferase	RM
Pfam	UHGV-1477994_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1477994_31	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1477994_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1477994_31	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_33	phrog_190	141.6	3.89981e-42	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477994_33	UniRef90_J4KCN7	262.0	0	PF06356 family protein	N/A
eggNOG-mapper	UHGV-1477994_33	936573.HMPREF1147_1709	262.0	0	N/A	N/A
Pfam	UHGV-1477994_33	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1477994_33	PF06356,NF033179	N/A	N/A	N/A	N/A
KOfam	UHGV-1477994_36	K11144	187.2	0	dnaI; primosomal protein DnaI	N/A
PHROG	UHGV-1477994_36	phrog_50	149.0	2.94273e-44	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477994_36	UniRef90_UPI001F004CEF	442.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1477994_36	585503.HMPREF7545_1719	328.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1477994_36	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1477994_36	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1477994_36	PF01695,MF_01158,NF006505,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_39	phrog_398	191.6	0	N/A	unknown function
UniRef90	UHGV-1477994_39	UniRef90_UPI000489F9F0	306.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1477994_39	1485543.JMME01000021_gene802	306.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-1477994_39	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1477994_39	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_40	phrog_155	156.4	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477994_40	UniRef90_UPI0009F184EE	387.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1477994_40	929506.CbC4_1193	172.0	0	ERF superfamily	N/A
Pfam	UHGV-1477994_40	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1477994_40	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_41	phrog_253	114.3	9.1e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477994_41	UniRef90_A0A1B3X2M4	274.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1477994_41	638302.HMPREF0908_1700	153.0	1.4013e-45	Siphovirus Gp157	N/A
Pfam	UHGV-1477994_41	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1477994_41	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1477994_42	PF11680,NF033952	N/A	N/A	N/A	N/A
PHROG	UHGV-1477994_43	phrog_14808	96.8	8.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1477994_43	679201.HMPREF9334_00304	149.0	0	N/A	N/A
PHROG	UHGV-1477994_48	phrog_30153	138.1	2.29995e-41	N/A	unknown function
UniRef90	UHGV-1477994_48	UniRef90_E0P176	192.0	0	LysM domain protein	N/A
eggNOG-mapper	UHGV-1477994_48	864563.HMPREF9166_1843	192.0	0	LysM domain	N/A
Pfam	UHGV-1477994_48	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1477994_48	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1477994_48	MF_02014,NF010723	N/A	N/A	N/A	N/A
UniRef90	UHGV-1477994_51	UniRef90_UPI0018C750A4	97.8	2.52e-25	N/A	N/A
eggNOG-mapper	UHGV-1477994_51	1159488.SEQMU2_01590	80.1	4.58e-19	N/A	N/A
Pfam	UHGV-1477994_51	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-1477994_51	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1477994_51	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1477994_52	K22300	56.2	7.4e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1477994_52	phrog_8	62.1	1.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1477994_52	UniRef90_UPI0018C79F05	104.0	2.18e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1477994_52	864563.HMPREF9166_0600	92.4	1.36e-21	sequence-specific DNA binding	N/A
Pfam	UHGV-1477994_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1477994_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1477994_52	PF01381,MF_02017,NF041951,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1477994	Yes	29,726	54	65	1