vOTU vOTU-144956

vOTU: vOTU-144956

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-144956
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00237 → vGENUS-16560 → vOTU-144956
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0224691
Biosample ID	N/A
Genome length (bp)	25,570 bps
CheckV completeness	66.94% (Medium-quality)
CDS count	34
CDS density	95.13%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	22	Host agreement	95.45
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0224691_1	K02245	88.7	7.4e-26	comGC; competence protein ComGC	N/A
UniRef90	UHGV-0224691_1	UniRef90_A0A6Z6WGR1	144.0	2.08793e-43	ComG operon protein 3	N/A
eggNOG-mapper	UHGV-0224691_1	1316408.HSISM1_337	144.0	3.50325e-44	Required for transformation and DNA binding	N/A
NCBIFam	UHGV-0224691_1	NF040999.1	N/A	N/A	competence type IV pilus major pilin ComGC	N/A
COG	UHGV-0224691_1	COG4537	N/A	N/A	Competence protein ComGC	N/A
structural_annotation	UHGV-0224691_1	NF040999,COG4537	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_3	phrog_3861	886.3	0	amidase	lysis
UniRef90	UHGV-0224691_3	UniRef90_A0A0Z8KIJ0	821.0	0	Prophage LambdaSa2, lysin	N/A
eggNOG-mapper	UHGV-0224691_3	1123314.AUIO01000016_gene855	692.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-0224691_3	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-0224691_3	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0224691_3	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
PHROG	UHGV-0224691_4	phrog_608	118.1	4.3e-35	holin	lysis
UniRef90	UHGV-0224691_4	UniRef90_I2NHW5	182.0	0	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-0224691_4	936580.HMPREF1516_0703	114.0	2.25e-31	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0224691_4	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-0224691_4	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-0224691_5	phrog_4257	160.4	0	N/A	unknown function
UniRef90	UHGV-0224691_5	UniRef90_A0A139QI86	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0224691_5	1005705.HMPREF9967_1056	196.0	0	N/A	N/A
PHROG	UHGV-0224691_6	phrog_1554	220.7	0	N/A	unknown function
UniRef90	UHGV-0224691_6	UniRef90_A0A359YI08	153.0	2.76056e-43	N/A	N/A
eggNOG-mapper	UHGV-0224691_6	1005705.HMPREF9967_1055	315.0	0	N/A	N/A
structural_annotation	UHGV-0224691_6	PF07104	N/A	N/A	N/A	N/A
UniRef90	UHGV-0224691_7	UniRef90_F5W039	55.5	0.00000000573	Conserved domain protein	N/A
PHROG	UHGV-0224691_8	phrog_2270	283.8	0	N/A	unknown function
UniRef90	UHGV-0224691_8	UniRef90_UPI0018978324	1491.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0224691_8	537874.B3GW15_9CAUD	661.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0224691_8	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-0224691_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0224691_8	PF14594,PF07902,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_9	phrog_33	78.4	1.5e-22	distal tail protein Dit	tail
UniRef90	UHGV-0224691_9	UniRef90_UPI001BE57815	448.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0224691_9	537874.B3GW14_9CAUD	278.0	0	Phage tail protein	N/A
NCBIFam	UHGV-0224691_9	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-0224691_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_10	phrog_1686	758.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0224691_10	UniRef90_UPI001F503712	1276.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0224691_10	537874.B3GW13_9CAUD	744.0	0	N/A	N/A
Pfam	UHGV-0224691_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0224691_10	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-0224691_10	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_11	phrog_706	180.0	0	N/A	unknown function
UniRef90	UHGV-0224691_11	UniRef90_UPI001CBECD66	245.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0224691_11	537874.B3GW12_9CAUD	254.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0224691_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0224691_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_12	phrog_1061	101.6	6e-30	N/A	unknown function
UniRef90	UHGV-0224691_12	UniRef90_A0A380KJJ3	92.8	3.77e-21	N/A	N/A
eggNOG-mapper	UHGV-0224691_12	537874.B3GW11_9CAUD	162.0	0	N/A	N/A
structural_annotation	UHGV-0224691_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_13	phrog_820	168.8	0	major tail protein	tail
UniRef90	UHGV-0224691_13	UniRef90_UPI0012BD2CD1	267.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0224691_13	537874.B3GW10_9CAUD	232.0	0	N/A	N/A
structural_annotation	UHGV-0224691_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_14	phrog_913	138.1	3.00004e-41	minor head protein	head and packaging
UniRef90	UHGV-0224691_14	UniRef90_UPI0012BB7B63	272.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0224691_14	1121871.AUAT01000035_gene1282	144.0	9.30462e-43	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-0224691_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0224691_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_15	phrog_556	74.5	1.3e-21	minor head protein	head and packaging
UniRef90	UHGV-0224691_15	UniRef90_UPI0012BC2934	189.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0224691_15	537874.B3GW08_9CAUD	119.0	1.99e-33	Minor capsid protein	N/A
Pfam	UHGV-0224691_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0224691_15	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_16	phrog_793	84.3	9.1e-25	head-tail adaptor	connector
UniRef90	UHGV-0224691_16	UniRef90_UPI001BE5FBE4	235.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0224691_16	1121871.AUAT01000035_gene1284	89.7	9.84e-22	Minor capsid protein	N/A
Pfam	UHGV-0224691_16	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-0224691_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_17	phrog_541	106.7	1.5e-31	head-tail adaptor	connector
UniRef90	UHGV-0224691_17	UniRef90_A0A3S4LW47	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-0224691_17	646413.C5IUJ7_9CAUD	155.0	0	N/A	N/A
PHROG	UHGV-0224691_18	phrog_2910	60.9	2.2e-17	N/A	unknown function
UniRef90	UHGV-0224691_18	UniRef90_F9PZ37	65.9	0.000000000000789	Conserved domain protein	N/A
structural_annotation	UHGV-0224691_18	PF20873	N/A	N/A	N/A	N/A
UniRef90	UHGV-0224691_19	UniRef90_A0A3G8F7I1	55.8	0.0000000177	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0224691_19	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_20	phrog_422	345.9	0	major head protein	head and packaging
UniRef90	UHGV-0224691_20	UniRef90_A0A4D6ASP8	516.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0224691_20	537874.B3GW03_9CAUD	537.0	0	N/A	N/A
structural_annotation	UHGV-0224691_20	PF20911	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_21	phrog_2303	165.4	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0224691_21	UniRef90_A0A150NS01	300.0	0	N/A	N/A
eggNOG-mapper	UHGV-0224691_21	537874.B3GW02_9CAUD	215.0	0	N/A	N/A
PHROG	UHGV-0224691_22	phrog_918	112.7	1.4e-33	N/A	unknown function
UniRef90	UHGV-0224691_22	UniRef90_UPI0007650EB7	151.0	0	N/A	N/A
eggNOG-mapper	UHGV-0224691_22	413066.A1EAE7_9CAUD	153.0	0	N/A	N/A
Pfam	UHGV-0224691_22	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0224691_22	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_23	phrog_581	387.3	0	minor head protein	head and packaging
UniRef90	UHGV-0224691_23	UniRef90_A0A4D6A8A0	737.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0224691_23	764291.STRUR_2106	517.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0224691_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0224691_23	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0224691_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0224691_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_25	phrog_533	622.3	0	portal protein	head and packaging
UniRef90	UHGV-0224691_25	UniRef90_A0A501VQI2	882.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0224691_25	764291.STRUR_2107	803.0	0	portal protein	N/A
Pfam	UHGV-0224691_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0224691_25	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0224691_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0224691_26	K06909	288.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0224691_26	phrog_3717	172.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0224691_26	UniRef90_G5KEP9	855.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0224691_26	764291.STRUR_2108	855.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0224691_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0224691_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0224691_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0224691_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0224691_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_27	phrog_509	280.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0224691_27	UniRef90_F9PZ29	406.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0224691_27	1035189.HMPREF9954_0301	406.0	0	DNA packaging	N/A
Pfam	UHGV-0224691_27	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0224691_27	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0224691_27	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0224691_27	PF10668,PF01920,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_28	phrog_36	103.7	1.8e-30	transcriptional regulator	transcription regulation
UniRef90	UHGV-0224691_28	UniRef90_A0A501VLM0	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-0224691_28	1214217.ALNF01000014_gene1384	211.0	0	N/A	N/A
Pfam	UHGV-0224691_28	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0224691_28	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_29	phrog_2275	135.1	1.6e-40	N/A	unknown function
UniRef90	UHGV-0224691_29	UniRef90_A0A060QNB6	152.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0224691_29	374526.A5GYP5_9CAUD	91.7	9.22e-23	N/A	N/A
PHROG	UHGV-0224691_30	phrog_24146	116.3	1e-34	N/A	unknown function
PHROG	UHGV-0224691_31	phrog_2131	99.0	3.5e-29	N/A	unknown function
UniRef90	UHGV-0224691_31	UniRef90_O34053	130.0	6.79e-37	ORF22	N/A
eggNOG-mapper	UHGV-0224691_31	73422.L0P2P5_9CAUD	143.0	1.12945e-42	N/A	N/A
PHROG	UHGV-0224691_32	phrog_827	218.7	0	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0224691_32	UniRef90_Q1CP43	252.0	0	N/A	N/A
Pfam	UHGV-0224691_32	PF07066	N/A	N/A	Lactococcus phage M3 protein	DUF3882
structural_annotation	UHGV-0224691_32	PF07066,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0224691_33	phrog_1341	144.8	2.00386e-43	N/A	unknown function
UniRef90	UHGV-0224691_33	UniRef90_A0A0Y3MU61	144.0	1.81048e-42	N/A	N/A
eggNOG-mapper	UHGV-0224691_33	997830.HMPREF1124_0584	148.0	7.00649e-45	N/A	N/A
PHROG	UHGV-0224691_34	phrog_6041	120.7	2.8e-36	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0224691	Yes	25,570	43	67	1