vOTU vOTU-144972

vOTU: vOTU-144972

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-144972
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vGENUS-08738 → vOTU-144972
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1462949
Biosample ID	SAMEA2738114
Genome length (bp)	22,462 bps
CheckV completeness	67.18% (Medium-quality)
CDS count	31
CDS density	95.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	44	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1462949_1	phrog_1529	58.1	2.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1462949_1	638301.HMPREF0444_1489	52.8	0.0000000161	N/A	N/A
structural_annotation	UHGV-1462949_1	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_2	phrog_1309	167.2	0	endolysin	lysis
UniRef90	UHGV-1462949_2	UniRef90_A0A081QD15	427.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1462949_2	997830.HMPREF1124_0615	275.0	0	CHAP domain	N/A
Pfam	UHGV-1462949_2	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1462949_2	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1462949_2	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1462949_2	PF19127,PF05257,TIGR04035,TIGR02594,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_3	phrog_608	130.0	8.3e-39	holin	lysis
UniRef90	UHGV-1462949_3	UniRef90_A0A081PN72	185.0	0	Phage holin protein (Holin_LLH)	N/A
eggNOG-mapper	UHGV-1462949_3	365659.smi_0477	171.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1462949_3	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1462949_3	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1462949_4	phrog_4257	129.0	2.3e-38	N/A	unknown function
UniRef90	UHGV-1462949_4	UniRef90_F9PZ52	99.4	8.36e-24	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1462949_4	997830.HMPREF1124_0612	102.0	6.18e-26	N/A	N/A
PHROG	UHGV-1462949_5	phrog_1554	241.9	0	N/A	unknown function
UniRef90	UHGV-1462949_5	UniRef90_A0A139Q9H9	304.0	0	N/A	N/A
eggNOG-mapper	UHGV-1462949_5	1035189.HMPREF9954_1920	213.0	0	N/A	N/A
structural_annotation	UHGV-1462949_5	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_6	phrog_12683	102.8	1.8e-30	N/A	unknown function
PHROG	UHGV-1462949_7	phrog_7841	629.4	0	N/A	unknown function
UniRef90	UHGV-1462949_7	UniRef90_A0A139Q9L9	506.0	0	Phage hyaluronidase	N/A
eggNOG-mapper	UHGV-1462949_7	585203.SMSK564_1275	412.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-1462949_7	PF07902	N/A	N/A	gp58-like protein	Gp58
Pfam	UHGV-1462949_7	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1462949_7	PF13884	N/A	N/A	N/A	N/A
KOfam	UHGV-1462949_8	K06558	45.0	0.00000000000057	MSR1, CD204; macrophage scavenger receptor 1	N/A
PHROG	UHGV-1462949_8	phrog_6049	98.7	1.2e-32	tail fiber protein	tail
UniRef90	UHGV-1462949_8	UniRef90_A0A139PKK5	748.0	0	Hyaluronate lyase (Phage associated)	N/A
eggNOG-mapper	UHGV-1462949_8	482234.SCAZ3_03785	80.1	0.000000000000188	translation initiation factor activity	N/A
Pfam	UHGV-1462949_8	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
Pfam	UHGV-1462949_8	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1462949_8	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1462949_9	phrog_2270	551.0	0	N/A	unknown function
UniRef90	UHGV-1462949_9	UniRef90_A0A0U0KNU3	1176.0	0	Bacteriophage PblB	N/A
eggNOG-mapper	UHGV-1462949_9	1566990.A0A0A0YV37_9CAUD	757.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1462949_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1462949_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1462949_9	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_10	phrog_33	51.2	0.000000000000024	distal tail protein Dit	tail
UniRef90	UHGV-1462949_10	UniRef90_UPI001EFF5C66	332.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1462949_10	1123314.AUIO01000016_gene850	337.0	0	N/A	N/A
structural_annotation	UHGV-1462949_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1462949_11	K10421	48.2	0.00000000000007	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1462949_11	phrog_58	314.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1462949_11	UniRef90_A0A081QD07	1121.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-1462949_11	888049.HMPREF8578_0706	874.0	0	Phage tail tape measure protein	N/A
COG	UHGV-1462949_11	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-1462949_11	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_12	phrog_709	126.4	1.2e-37	N/A	unknown function
UniRef90	UHGV-1462949_12	UniRef90_A0A0E4CSV4	175.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1462949_12	1035184.HMPREF1042_1216	178.0	0	N/A	N/A
structural_annotation	UHGV-1462949_12	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_13	phrog_88	150.1	9.80909e-45	major tail protein	tail
UniRef90	UHGV-1462949_13	UniRef90_A0A7G1ITF4	363.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1462949_13	1123314.AUIO01000016_gene846	300.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1462949_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1462949_13	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_14	phrog_78	40.8	0.000000000041	tail terminator	connector
UniRef90	UHGV-1462949_14	UniRef90_T0U477	125.0	4.24e-35	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1462949_14	644007.C5J968_9CAUD	134.0	1.11e-39	aminopeptidase activity	N/A
structural_annotation	UHGV-1462949_14	PF20765	N/A	N/A	N/A	N/A
UniRef90	UHGV-1462949_15	UniRef90_UPI00195EB731	147.0	1.49939e-43	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1462949_15	1123314.AUIO01000016_gene844	151.0	0	N/A	N/A
Pfam	UHGV-1462949_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1462949_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_16	phrog_1951	112.7	1.5e-33	head-tail adaptor	connector
UniRef90	UHGV-1462949_16	UniRef90_UPI001956060B	158.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1462949_16	1005705.HMPREF9967_1045	142.0	5.91348e-43	head-tail adaptor	N/A
NCBIFam	UHGV-1462949_16	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1462949_16	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1462949_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_17	phrog_2550	125.9	7.6e-38	N/A	unknown function
UniRef90	UHGV-1462949_17	UniRef90_A0A0T8BHT1	135.0	5.77e-40	N/A	N/A
eggNOG-mapper	UHGV-1462949_17	888049.HMPREF8578_0700	131.0	4.6e-39	N/A	N/A
Pfam	UHGV-1462949_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1462949_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_18	phrog_3673	72.7	3.2e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-1462949_18	UniRef90_A0A098ANL2	81.3	1.74e-18	N/A	N/A
PHROG	UHGV-1462949_19	phrog_10	178.4	0	major head protein	head and packaging
UniRef90	UHGV-1462949_19	UniRef90_A0A1X0X1F5	637.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1462949_19	644007.C5J963_9CAUD	615.0	0	peptidase activity	N/A
Pfam	UHGV-1462949_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1462949_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1462949_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1462949_20	K06904	132.2	5.1e-39	N/A	N/A
PHROG	UHGV-1462949_20	phrog_80	167.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1462949_20	UniRef90_A0A098ANM2	361.0	0	Bacteriophage maturation protease	N/A
eggNOG-mapper	UHGV-1462949_20	1005705.HMPREF9967_1041	339.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1462949_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1462949_20	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1462949_20	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1462949_20	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_21	phrog_12	195.3	0	portal protein	head and packaging
UniRef90	UHGV-1462949_21	UniRef90_A0A7G1IQG3	777.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1462949_21	1123314.AUIO01000016_gene838	621.0	0	Phage portal protein	N/A
Pfam	UHGV-1462949_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1462949_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1462949_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1462949_21	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_22	phrog_2955	123.9	3.3e-37	N/A	unknown function
UniRef90	UHGV-1462949_22	UniRef90_A0A062WVS8	121.0	8.77e-35	N/A	N/A
PHROG	UHGV-1462949_23	phrog_9	339.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1462949_23	UniRef90_A0A7G1IQ86	1142.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1462949_23	644007.C5J959_9CAUD	1099.0	0	Phage Terminase	N/A
Pfam	UHGV-1462949_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1462949_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1462949_23	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_24	phrog_361	154.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1462949_24	UniRef90_A0A414CIM9	226.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1462949_24	1005705.HMPREF9967_1038	250.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1462949_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1462949_24	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1462949_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_25	phrog_119	67.1	2.6e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1462949_25	UniRef90_W1US92	216.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-1462949_25	888049.HMPREF8578_0692	188.0	0	endonuclease activity	N/A
COG	UHGV-1462949_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1462949_27	K04763	102.8	4.5e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1462949_27	phrog_216	185.3	0	integrase	integration and excision
UniRef90	UHGV-1462949_27	UniRef90_A0A4D6B299	362.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1462949_27	888049.HMPREF8578_0690	360.0	0	Integrase	N/A
Pfam	UHGV-1462949_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1462949_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1462949_27	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_28	phrog_36	76.3	4.7e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1462949_28	UniRef90_E6KKC4	256.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1462949_28	1123315.AUIP01000003_gene229	87.8	2.16e-20	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1462949_28	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1462949_28	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1462949_29	K22300	49.8	0.000000000000069	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1462949_29	phrog_8	66.2	7.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1462949_29	UniRef90_C5J9A2	220.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1462949_29	1540257.JQMW01000013_gene710	52.8	0.000000207	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1462949_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1462949_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1462949_29	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1462949_30	phrog_3476	106.2	2.2e-31	N/A	unknown function
PHROG	UHGV-1462949_31	phrog_6716	46.1	0.0000000000007	N/A	unknown function
UniRef90	UHGV-1462949_31	UniRef90_A0A081R3G5	67.8	0.0000000000000317	3-dehydroquinate synthase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1462949	Yes	22,462	41	67	1