vOTU vOTU-145189

vOTU: vOTU-145189

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-145189
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vOTU-145189
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0027752
Biosample ID	SAMEA4766015
Genome length (bp)	50,121 bps
CheckV completeness	86.96% (Medium-quality)
CDS count	82
CDS density	86.14%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	481	Host agreement	97.51
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0027752_1	phrog_25289	59.2	5.5e-17	N/A	unknown function
UniRef90	UHGV-0027752_1	UniRef90_A0A2G3NZE5	93.2	7.23e-22	Phage antirepressor Ant (Fragment)	N/A
eggNOG-mapper	UHGV-0027752_1	1399941.U3PBD7_9CAUD	92.0	2.09e-21	DNA binding	N/A
Pfam	UHGV-0027752_1	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0027752_1	PF03374,COG3645	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027752_9	1408324.JNJK01000028_gene1590	61.2	0.0000000142	N/A	N/A
eggNOG-mapper	UHGV-0027752_10	1121865.OMW_01950	73.9	2.28e-16	N/A	N/A
structural_annotation	UHGV-0027752_10	PF17516,NF007197	N/A	N/A	N/A	N/A
KOfam	UHGV-0027752_11	K02314	203.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0027752_11	phrog_19	215.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027752_11	UniRef90_UPI001CBC4B63	423.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0027752_11	1203606.HMPREF1526_01325	158.0	5.82001e-41	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0027752_11	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0027752_11	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0027752_11	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_12	phrog_15768	111.2	1.7e-33	N/A	unknown function
UniRef90	UHGV-0027752_12	UniRef90_A0A6N7WKT0	97.8	1.84e-21	N/A	N/A
eggNOG-mapper	UHGV-0027752_12	748224.HMPREF9436_03357	97.8	4.58e-22	N/A	N/A
Pfam	UHGV-0027752_12	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0027752_12	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_13	phrog_599	49.0	0.00000000000014	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0027752_13	UniRef90_A0A412AV49	89.7	7.14e-22	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-0027752_13	97139.C824_00027	82.0	1.23e-19	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0027752_13	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0027752_13	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0027752_13	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0027752_13	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_15	phrog_924	42.8	0.0000000000093	N/A	unknown function
UniRef90	UHGV-0027752_15	UniRef90_A0A6G5YDC2	53.5	0.000000102	N/A	N/A
Pfam	UHGV-0027752_15	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0027752_15	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027752_16	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-0027752_18	K21686	52.5	0.0000000000000044	prpR; XRE family transcriptional regulator, fatty acid utilization regulator	N/A
PHROG	UHGV-0027752_18	phrog_11947	42.2	0.0000000000096	N/A	unknown function
eggNOG-mapper	UHGV-0027752_18	584708.Apau_0460	54.7	0.000000264	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0027752_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027752_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027752_18	PF01381,MF_00535,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027752_21	UniRef90_UPI0012DD33A2	301.0	0	restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-0027752_21	596329.HMPREF0631_0252	207.0	0	restriction endonuclease	N/A
PADLOC	UHGV-0027752_21	MTase_II_00176	149.5	0	Type II methyltransferase	RM
COG	UHGV-0027752_21	COG1002	N/A	N/A	Type II restriction/modification system, endonuclease and methylase domains	N/A
structural_annotation	UHGV-0027752_23	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027752_24	PF20331,COG5264	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027752_27	PF03465,COG2331	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_30	phrog_4856	40.2	0.000000000064	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-0027752_30	PF11998,COG5420	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_32	phrog_843	62.0	6.7e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027752_32	UniRef90_UPI001159D907	115.0	1.85e-29	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0027752_32	929506.CbC4_1203	106.0	1.56e-26	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
structural_annotation	UHGV-0027752_32	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0027752_35	K00558	170.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0027752_35	phrog_116	201.2	0	DNA methyltransferase	other
UniRef90	UHGV-0027752_35	UniRef90_D4JYK0	529.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0027752_35	718252.FP2_16350	529.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0027752_35	oMTase_00004	232.9	0	orphan methyltransferase	RM
Pfam	UHGV-0027752_35	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0027752_35	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0027752_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0027752_35	PF00145,TIGR00675	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_36	phrog_14105	251.4	0	N/A	unknown function
UniRef90	UHGV-0027752_36	UniRef90_UPI001922144E	255.0	0	PPE family protein	N/A
eggNOG-mapper	UHGV-0027752_36	742740.HMPREF9474_02379	155.0	8.40779e-44	dextransucrase activity	N/A
Pfam	UHGV-0027752_36	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-0027752_36	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-0027752_37	phrog_18107	77.0	3.2e-22	N/A	unknown function
UniRef90	UHGV-0027752_37	UniRef90_UPI00058F46CC	89.0	7.81e-19	N/A	N/A
eggNOG-mapper	UHGV-0027752_37	903814.ELI_1274	158.0	0	N/A	N/A
structural_annotation	UHGV-0027752_37	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_38	phrog_2872	243.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027752_38	UniRef90_A0A8J6JIF1	255.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0027752_38	754027.HMPREF9554_00709	223.0	0	N/A	N/A
Pfam	UHGV-0027752_38	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0027752_38	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_39	phrog_38771	66.9	2.2e-19	N/A	unknown function
structural_annotation	UHGV-0027752_40	PF14143	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027752_42	760568.Desku_0919	97.8	1.73e-22	N/A	N/A
structural_annotation	UHGV-0027752_42	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027752_44	TIGR03826	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027752_45	PF10922	N/A	N/A	N/A	N/A
KOfam	UHGV-0027752_46	K07741	98.4	2e-28	antB; anti-repressor protein	N/A
PHROG	UHGV-0027752_46	phrog_63	194.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0027752_46	UniRef90_A0A844D5R9	324.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0027752_46	1423775.BAMN01000006_gene1075	241.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0027752_46	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0027752_46	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0027752_46	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0027752_46	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
PHROG	UHGV-0027752_47	phrog_1468	40.5	0.000000000029	transcriptional repressor	transcription regulation
UniRef90	UHGV-0027752_47	UniRef90_UPI001956DCC9	70.1	0.0000000000000146	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0027752_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0027752_47	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_48	phrog_8	44.9	0.0000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027752_48	UniRef90_UPI001D05D211	73.2	0.0000000000000187	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0027752_48	693746.OBV_43290	66.6	0.0000000000021	addiction module antidote protein HigA	N/A
COG	UHGV-0027752_48	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0027752_48	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027752_53	UniRef90_A0A2A7AM70	215.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0027752_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0027752_53	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_55	phrog_4402	108.5	5.8e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027752_55	UniRef90_A0A0H5Q331	295.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0027752_55	999413.HMPREF1094_04438	125.0	3.74e-30	Initiator Replication protein	N/A
Pfam	UHGV-0027752_55	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0027752_55	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0027752_55	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0027752_55	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
KOfam	UHGV-0027752_56	K03496	242.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0027752_56	phrog_164	171.3	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027752_56	UniRef90_A0A1C6BS15	205.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0027752_56	1408423.JHYA01000021_gene392	189.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0027752_56	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0027752_56	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0027752_56	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_57	phrog_7704	41.8	0.000000000016	N/A	unknown function
Pfam	UHGV-0027752_57	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0027752_58	PF07878	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_59	phrog_3896	69.6	2.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0027752_59	397290.C810_01338	67.8	0.0000000000000349	N/A	N/A
PHROG	UHGV-0027752_60	phrog_130	141.1	7.90052e-42	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0027752_60	UniRef90_UPI001DACB905	157.0	2.25609e-43	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0027752_60	1121115.AXVN01000056_gene2483	162.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0027752_60	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0027752_60	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0027752_60	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027752_61	1408437.JNJN01000043_gene801	87.0	2.04e-18	N/A	N/A
eggNOG-mapper	UHGV-0027752_62	1408437.JNJN01000043_gene802	116.0	6.04e-32	N/A	N/A
PHROG	UHGV-0027752_63	phrog_16490	106.7	2.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-0027752_63	1408437.JNJN01000043_gene803	161.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0027752_67	phrog_263	84.3	9.2e-25	holin	lysis
UniRef90	UHGV-0027752_67	UniRef90_A0A329UCA4	110.0	3.27e-30	Phage holin	N/A
eggNOG-mapper	UHGV-0027752_67	411483.FAEPRAA2165_00003	105.0	5.26e-29	SPP1 phage holin	N/A
Pfam	UHGV-0027752_67	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0027752_67	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0027752_67	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_68	phrog_4105	87.3	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0027752_68	718252.FP2_06480	157.0	0	N/A	N/A
KOfam	UHGV-0027752_69	K07273	165.5	0	acm; lysozyme	N/A
PHROG	UHGV-0027752_69	phrog_291	139.9	2.20004e-41	endolysin	lysis
UniRef90	UHGV-0027752_69	UniRef90_E2ZES5	247.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0027752_69	748224.HMPREF9436_00154	247.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0027752_69	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0027752_69	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0027752_69	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_70	phrog_28468	77.3	1.1e-22	minor head protein	head and packaging
PHROG	UHGV-0027752_72	phrog_6616	218.9	0	tail protein	tail
eggNOG-mapper	UHGV-0027752_72	445971.ANASTE_00088	122.0	2.27e-26	N/A	N/A
structural_annotation	UHGV-0027752_72	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_73	phrog_1194	102.7	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0027752_73	1121866.AUGK01000003_gene1438	97.4	2e-24	N/A	N/A
Pfam	UHGV-0027752_73	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0027752_73	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_74	phrog_1535	125.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0027752_74	1121866.AUGK01000003_gene1437	247.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0027752_74	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
COG	UHGV-0027752_74	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-0027752_75	1121333.JMLH01000047_gene1011	74.7	0.00000000000000168	N/A	N/A
eggNOG-mapper	UHGV-0027752_76	1123263.AUKY01000015_gene1618	58.9	0.00000000108	N/A	N/A
Pfam	UHGV-0027752_76	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0027752_76	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_77	phrog_158	42.4	0.000000000012	major tail protein	tail
UniRef90	UHGV-0027752_77	UniRef90_UPI001D087591	115.0	1.76e-30	phage tail protein	N/A
eggNOG-mapper	UHGV-0027752_77	1449343.JQLQ01000002_gene1514	58.2	0.0000000143	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0027752_77	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027752_78	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027752_79	476272.RUMHYD_01963	54.3	0.000000987	N/A	N/A
structural_annotation	UHGV-0027752_80	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027752_81	UniRef90_R6N215	82.0	5.26e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-0027752_81	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0027752_82	phrog_29	179.5	0	major head protein	head and packaging
UniRef90	UHGV-0027752_82	UniRef90_A0A2Z4QBB4	372.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0027752_82	1347368.HG964404_gene4993	263.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0027752_82	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0027752_82	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027752	Yes	50,121	49	87	1