vOTU vOTU-145688

vOTU: vOTU-145688

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-145688
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00048 → vSUBFAM-06586 → vOTU-145688
Host lineage
Host range breadth
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1540506
Biosample ID	N/A
Genome length (bp)	28,156 bps
CheckV completeness	58.49% (Medium-quality)
CDS count	33
CDS density	95.06%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1540506_1	phrog_1086	89.1	2.4e-26	N/A	unknown function
UniRef90	UHGV-1540506_1	UniRef90_UPI001AC1C0CB	151.0	1.4013e-45	SH3 beta-barrel fold-containing protein	N/A
eggNOG-mapper	UHGV-1540506_1	1127692.HMPREF9075_00052	211.0	0	WYL_2, Sm-like SH3 beta-barrel fold	N/A
Pfam	UHGV-1540506_1	PF10902	N/A	N/A	WYL_2, Sm-like SH3 beta-barrel fold	WYL_2
structural_annotation	UHGV-1540506_1	PF10902	N/A	N/A	N/A	N/A
UniRef90	UHGV-1540506_2	UniRef90_A0A6H0KSW6	57.8	0.0000000335	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1540506_2	1227266.HMPREF1551_00529	99.0	5.99e-25	N/A	N/A
structural_annotation	UHGV-1540506_2	PF04322,COG1935	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_4	phrog_424	47.5	0.00000000000026	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1540506_4	UniRef90_U2AY20	459.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1540506_4	1227266.HMPREF1551_00527	459.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1540506_4	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1540506_4	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1540506_4	PF01507,MF_00063,TIGR02057,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_5	phrog_9353	208.7	0	N/A	unknown function
UniRef90	UHGV-1540506_5	UniRef90_UPI001AC9C54A	422.0	0	DNA methylase	N/A
eggNOG-mapper	UHGV-1540506_5	1227266.HMPREF1551_00526	513.0	0	N/A	N/A
COG	UHGV-1540506_5	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1540506_5	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_6	phrog_33852	181.7	0	N/A	unknown function
UniRef90	UHGV-1540506_6	UniRef90_U2CA84	180.0	0	Transcriptional regulator, Fis family	N/A
eggNOG-mapper	UHGV-1540506_6	888059.HMPREF9071_2132	237.0	0	N/A	N/A
KOfam	UHGV-1540506_7	K06909	275.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1540506_7	phrog_5653	104.0	6.9e-31	terminase large subunit	head and packaging
UniRef90	UHGV-1540506_7	UniRef90_L1PCG9	825.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1540506_7	1127692.HMPREF9075_00046	825.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1540506_7	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1540506_7	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1540506_7	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1540506_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1540506_7	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_8	phrog_64	216.5	0	portal protein	head and packaging
UniRef90	UHGV-1540506_8	UniRef90_L1PD19	822.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1540506_8	1127692.HMPREF9075_00045	822.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1540506_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1540506_8	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_9	phrog_35295	292.5	0	N/A	unknown function
UniRef90	UHGV-1540506_9	UniRef90_A0A139LH69	223.0	0	Gln_amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1540506_9	1127692.HMPREF9075_00044	557.0	0	N/A	N/A
PHROG	UHGV-1540506_10	phrog_6305	300.2	0	tail protein	tail
eggNOG-mapper	UHGV-1540506_10	1127692.HMPREF9075_00043	515.0	0	N/A	N/A
structural_annotation	UHGV-1540506_10	PF05709,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_11	phrog_19846	1294.0	0	N/A	unknown function
UniRef90	UHGV-1540506_11	UniRef90_J6IBV6	1580.0	0	Fibronectin type III domain protein	N/A
eggNOG-mapper	UHGV-1540506_11	1127692.HMPREF9075_00042	1724.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1540506_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1540506_11	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1540506_11	PF14594,PF03623,PF01441,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1540506_12	1127692.HMPREF9075_00041	115.0	2.81e-32	N/A	N/A
structural_annotation	UHGV-1540506_12	PF14469	N/A	N/A	N/A	N/A
UniRef90	UHGV-1540506_13	UniRef90_J4X9U9	102.0	1.7e-24	Putative lipoprotein	N/A
eggNOG-mapper	UHGV-1540506_13	1127692.HMPREF9075_00040	243.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540506_14	1127692.HMPREF9075_00039	91.7	2.84e-24	N/A	N/A
KOfam	UHGV-1540506_15	K02395	93.9	1.7e-27	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1540506_15	phrog_3513	144.0	1.10002e-42	endolysin	lysis
UniRef90	UHGV-1540506_15	UniRef90_UPI0002D4B848	274.0	0	glucosaminidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1540506_15	1127692.HMPREF9075_00038	253.0	0	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1540506_15	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-1540506_15	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1540506_15	PF01832,TIGR02541,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_16	phrog_20732	188.8	0	N/A	unknown function
UniRef90	UHGV-1540506_16	UniRef90_UPI0003AD759F	161.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1540506_16	1127692.HMPREF9075_00037	256.0	0	N/A	N/A
Pfam	UHGV-1540506_16	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-1540506_16	PF05105,TIGR01593	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1540506_17	553177.CAPSP0001_2414	126.0	6.84e-37	N/A	N/A
structural_annotation	UHGV-1540506_17	PF10043,NF008028,COG5544	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_18	phrog_5824	216.4	0	N/A	unknown function
UniRef90	UHGV-1540506_18	UniRef90_A0A250F5G7	368.0	0	Spindle pole body component Spc42p	N/A
eggNOG-mapper	UHGV-1540506_18	1127692.HMPREF9075_00036	327.0	0	N/A	N/A
PHROG	UHGV-1540506_19	phrog_909	58.4	1.2e-16	major head protein	head and packaging
eggNOG-mapper	UHGV-1540506_19	1127692.HMPREF9075_00035	231.0	0	N/A	N/A
PHROG	UHGV-1540506_20	phrog_29	179.7	0	major head protein	head and packaging
UniRef90	UHGV-1540506_20	UniRef90_A0A1G7AL91	494.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1540506_20	1127692.HMPREF9075_00034	679.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1540506_20	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1540506_20	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_21	phrog_7935	132.0	1.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-1540506_21	1127692.HMPREF9075_00033	216.0	0	N/A	N/A
Pfam	UHGV-1540506_21	PF20449	N/A	N/A	N/A	DUF6706
structural_annotation	UHGV-1540506_21	PF20449	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_22	phrog_13251	136.3	6.59998e-41	N/A	unknown function
eggNOG-mapper	UHGV-1540506_22	1127692.HMPREF9075_00032	203.0	0	N/A	N/A
structural_annotation	UHGV-1540506_22	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_23	phrog_5377	184.4	0	N/A	unknown function
UniRef90	UHGV-1540506_23	UniRef90_UPI0013CF742A	128.0	2.97e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1540506_23	1127692.HMPREF9075_00031	252.0	0	N/A	N/A
PHROG	UHGV-1540506_24	phrog_5597	137.8	3.20001e-41	N/A	unknown function
eggNOG-mapper	UHGV-1540506_24	1127692.HMPREF9075_00030	263.0	0	N/A	N/A
structural_annotation	UHGV-1540506_24	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1540506_25	1127692.HMPREF9075_00029	228.0	0	N/A	N/A
structural_annotation	UHGV-1540506_25	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1540506_26	phrog_12247	187.7	0	N/A	unknown function
UniRef90	UHGV-1540506_26	UniRef90_W1I6R7	60.5	0.00000000435	Uncultured bacterium extrachromosomal DNA RGI01907	N/A
eggNOG-mapper	UHGV-1540506_26	1127692.HMPREF9075_00028	285.0	0	N/A	N/A
structural_annotation	UHGV-1540506_26	PF20336,TIGR01674	N/A	N/A	N/A	N/A
KOfam	UHGV-1540506_28	K20283	51.0	9.7e-19	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-1540506_28	phrog_9959	634.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1540506_28	UniRef90_L1PCE9	1713.0	0	Tape measure domain protein	N/A
eggNOG-mapper	UHGV-1540506_28	1127692.HMPREF9075_00026	1713.0	0	Tape measure domain protein	N/A
Pfam	UHGV-1540506_28	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1540506_28	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1540506_28	PF20155	N/A	N/A	N/A	N/A
UniRef90	UHGV-1540506_30	UniRef90_A0A017N7R5	130.0	1.61e-34	Putative 50S ribosomal protein L27	N/A
eggNOG-mapper	UHGV-1540506_30	706436.HMPREF9074_07911	421.0	0	N/A	N/A
KOfam	UHGV-1540506_31	K18831	42.5	0.0000000000026	higA; HTH-type transcriptional regulator / antitoxin HigA	N/A
PHROG	UHGV-1540506_31	phrog_2439	249.5	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1540506_31	UniRef90_A0A0A6YT87	644.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1540506_31	706436.HMPREF9074_07910	644.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1540506_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1540506_31	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1540506_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1540506_31	PF06114,PF01381,NF038139,COG2856,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1540506_33	K04763	147.2	1.4013e-43	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1540506_33	phrog_1	175.3	0	integrase	integration and excision
UniRef90	UHGV-1540506_33	UniRef90_L1PC98	747.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1540506_33	1127692.HMPREF9075_00024	747.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-1540506_33	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-1540506_33	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1540506_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1540506_33	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1540506_33	PF00589,PF13102,PF17293,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1540506	Yes	28,156	39	58	1