vOTU vOTU-146162

vOTU: vOTU-146162

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-146162
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-00265 → vGENUS-01393 → vOTU-146162
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2141218
Biosample ID	N/A
Genome length (bp)	27,650 bps
CheckV completeness	77.32% (Medium-quality)
CDS count	50
CDS density	96.13%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum	Total connections	42	Host agreement	95.24

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 77.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2141218_3	phrog_8	47.5	0.00000000000039	transcriptional regulator	transcription regulation
Pfam	UHGV-2141218_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-2141218_3	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2141218_4	UniRef90_A0A7W8MVA4	70.5	0.0000000000000173	Plasmid maintenance system antidote protein VapI	N/A
eggNOG-mapper	UHGV-2141218_4	320850.Q4ZA66_9CAUD	52.4	0.0000000366	N/A	N/A
structural_annotation	UHGV-2141218_4	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_12	phrog_862	56.1	6.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-2141218_12	1203606.HMPREF1526_00310	122.0	3.95e-32	N/A	N/A
structural_annotation	UHGV-2141218_12	PF05037,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_13	phrog_16304	123.0	2.8e-36	N/A	unknown function
UniRef90	UHGV-2141218_13	UniRef90_A0A417HNC3	155.0	9.66896e-44	N/A	N/A
eggNOG-mapper	UHGV-2141218_13	1449126.JQKL01000003_gene1705	96.7	3.52e-21	ROK family	N/A
Pfam	UHGV-2141218_13	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-2141218_13	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-2141218_13	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-2141218_14	K02314	252.0	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-2141218_14	phrog_19	239.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2141218_14	UniRef90_A0A6N8HZR2	336.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-2141218_14	693746.OBV_27440	188.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-2141218_14	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-2141218_14	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-2141218_14	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2141218_14	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-2141218_15	K01160	46.5	0.000000000001	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2141218_15	phrog_140	107.4	1.3e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2141218_15	UniRef90_A0A1C6HG31	275.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-2141218_15	411461.DORFOR_00015	115.0	7.41e-31	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2141218_15	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2141218_15	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2141218_15	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_18	phrog_1384	40.4	2.3e-18	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-2141218_18	428125.CLOLEP_01816	216.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-2141218_19	PF17399	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_20	phrog_2245	90.6	1.6e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-2141218_20	UniRef90_A0A4U9RLZ8	84.0	3.05e-19	N/A	N/A
eggNOG-mapper	UHGV-2141218_20	428125.CLOLEP_01814	175.0	0	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-2141218_20	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
UniRef90	UHGV-2141218_22	UniRef90_A0A8J6PM04	95.1	2.19e-24	N/A	N/A
structural_annotation	UHGV-2141218_22	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_23	phrog_22543	46.7	0.00000000000043	N/A	unknown function
PHROG	UHGV-2141218_24	phrog_7704	43.0	0.0000000000076	N/A	unknown function
UniRef90	UHGV-2141218_24	UniRef90_U2R3A7	105.0	1.33e-27	N/A	N/A
eggNOG-mapper	UHGV-2141218_24	665950.HMPREF1025_02540	78.2	7.78e-17	N/A	N/A
Pfam	UHGV-2141218_24	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2141218_24	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_28	phrog_36	43.0	0.0000000000051	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-2141218_28	428125.CLOLEP_01806	244.0	0	N/A	N/A
structural_annotation	UHGV-2141218_28	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-2141218_29	K07474	43.1	0.000000000012	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2141218_29	phrog_1595	67.1	7.9e-20	terminase small subunit	head and packaging
UniRef90	UHGV-2141218_29	UniRef90_A0A412AXK9	270.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2141218_29	1158602.I590_02986	133.0	4.65e-38	DNA packaging	N/A
COG	UHGV-2141218_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2141218_29	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_30	phrog_38	161.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-2141218_30	UniRef90_UPI00046F67CE	682.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-2141218_30	1232453.BAIF02000011_gene3352	681.0	0	N/A	N/A
structural_annotation	UHGV-2141218_30	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_31	phrog_64	375.6	0	portal protein	head and packaging
UniRef90	UHGV-2141218_31	UniRef90_A0A412AXG4	875.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2141218_31	1235792.C808_05332	574.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2141218_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-2141218_31	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-2141218_31	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_32	phrog_115	241.1	0	minor head protein	head and packaging
UniRef90	UHGV-2141218_32	UniRef90_A0A412AXN9	814.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-2141218_32	1235792.C808_05333	386.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-2141218_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-2141218_32	PF21814	N/A	N/A	N/A	DUF6883
NCBIFam	UHGV-2141218_32	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-2141218_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2141218_32	PF04233,TIGR01641	N/A	N/A	N/A	N/A
UniRef90	UHGV-2141218_33	UniRef90_F5RJP5	55.8	0.00000000362	Chaperonin	N/A
eggNOG-mapper	UHGV-2141218_33	1200557.JHWV01000022_gene2459	56.6	0.000000000372	N/A	N/A
structural_annotation	UHGV-2141218_33	PF02699,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-2141218_35	K03671	48.5	0.00000000000019	trxA; thioredoxin 1	N/A
UniRef90	UHGV-2141218_35	UniRef90_A0A412AXE3	173.0	0	Thioredoxin	N/A
eggNOG-mapper	UHGV-2141218_35	1123252.ATZF01000010_gene369	55.5	0.00000000892	Thioredoxin	N/A
Pfam	UHGV-2141218_35	PF00085	N/A	N/A	Thioredoxin	Thioredoxin
COG	UHGV-2141218_35	COG3118	N/A	N/A	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	N/A
structural_annotation	UHGV-2141218_35	PF00085,MF_01835,TIGR01068,COG0526	N/A	N/A	N/A	N/A
KOfam	UHGV-2141218_37	K07584	73.8	3e-21	N/A	N/A
PHROG	UHGV-2141218_37	phrog_4478	90.9	8.4e-27	peptidase	other
UniRef90	UHGV-2141218_37	UniRef90_A0A412AXD6	181.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-2141218_37	476272.RUMHYD_02852	117.0	4.9e-33	Cysteine protease Prp	N/A
Pfam	UHGV-2141218_37	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-2141218_37	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2141218_37	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_38	phrog_172	142.1	3.99931e-42	head scaffolding protein	head and packaging
UniRef90	UHGV-2141218_38	UniRef90_A0A412AXT0	343.0	0	N/A	N/A
eggNOG-mapper	UHGV-2141218_38	1232453.BAIF02000011_gene3358	148.0	1.43997e-41	N/A	N/A
Pfam	UHGV-2141218_38	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-2141218_38	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_39	phrog_544	148.1	3.92364e-44	major head protein	head and packaging
UniRef90	UHGV-2141218_39	UniRef90_A0A2V2CVM8	624.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2141218_39	1232453.BAIF02000011_gene3359	395.0	0	N/A	N/A
Pfam	UHGV-2141218_39	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-2141218_39	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_40	phrog_132	75.3	6.6e-22	head-tail adaptor	connector
UniRef90	UHGV-2141218_40	UniRef90_UPI001CF82054	126.0	1.13e-35	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-2141218_40	1235792.C808_05341	137.0	1.10001e-40	N/A	N/A
Pfam	UHGV-2141218_40	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-2141218_40	PF05135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2141218_41	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_42	phrog_5	45.4	0.0000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-2141218_42	UniRef90_A0A412AXL7	244.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2141218_42	742722.HMPREF9463_00249	149.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-2141218_42	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_43	phrog_176	71.9	8.1e-21	tail terminator	connector
UniRef90	UHGV-2141218_43	UniRef90_A0A412AXH4	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-2141218_43	1235792.C808_05344	192.0	0	N/A	N/A
Pfam	UHGV-2141218_43	PF16807	N/A	N/A	N/A	DUF5072
structural_annotation	UHGV-2141218_43	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_44	phrog_1407	170.6	0	major tail protein	tail
UniRef90	UHGV-2141218_44	UniRef90_A0A412AXG9	505.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-2141218_44	1235792.C808_05345	338.0	0	Phage tail tube protein	N/A
Pfam	UHGV-2141218_44	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
Pfam	UHGV-2141218_44	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
NCBIFam	UHGV-2141218_44	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-2141218_44	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-2141218_44	PF06199,PF18316,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_45	phrog_2115	43.4	0.0000000000074	tail protein	tail
UniRef90	UHGV-2141218_45	UniRef90_R5KJ84	76.6	5.7e-16	BH3520 protein	N/A
eggNOG-mapper	UHGV-2141218_45	1235792.C808_05346	122.0	4.13e-35	N/A	N/A
structural_annotation	UHGV-2141218_45	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_46	phrog_7423	159.4	0	N/A	unknown function
UniRef90	UHGV-2141218_46	UniRef90_UPI001BB3399C	115.0	6.31e-31	phenylalanine racemase	N/A
eggNOG-mapper	UHGV-2141218_46	1235792.C808_05347	139.0	5.65998e-41	N/A	N/A
PHROG	UHGV-2141218_47	phrog_58	217.7	0	tail length tape measure protein	tail
UniRef90	UHGV-2141218_47	UniRef90_UPI000E491C35	117.0	6.79e-24	tape measure protein	N/A
eggNOG-mapper	UHGV-2141218_47	411470.RUMGNA_02228	318.0	0	tape measure	N/A
Pfam	UHGV-2141218_47	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-2141218_47	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-2141218_47	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2141218_47	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2141218_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_48	phrog_33	75.4	1.2e-21	distal tail protein Dit	tail
UniRef90	UHGV-2141218_48	UniRef90_A0A412AXU0	473.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2141218_48	1235798.C817_02569	177.0	0	tail component	N/A
Pfam	UHGV-2141218_48	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-2141218_48	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2141218_48	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2141218_49	phrog_13289	439.7	0	tail protein	tail
UniRef90	UHGV-2141218_49	UniRef90_A0A412AXS9	1394.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-2141218_49	1235798.C817_02568	512.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-2141218_49	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-2141218_49	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2141218_49	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-2141218_49	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2141218_50	428125.CLOLEP_02045	156.0	4.2039e-45	N/A	N/A
Pfam	UHGV-2141218_50	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2141218	Yes	27,650	44	77	1