vOTU vOTU-146628

vOTU: vOTU-146628

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-146628
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00048 → vGENUS-00024 → vOTU-146628
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1453932
Biosample ID	SAMN02333945
Genome length (bp)	34,520 bps
CheckV completeness	58.62% (Medium-quality)
CDS count	56
CDS density	82.24%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	2831	Host agreement	78.56
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1453932_2	phrog_21718	44.3	0.0000000000026	N/A	unknown function
eggNOG-mapper	UHGV-1453932_2	658655.HMPREF0988_00919	104.0	4.82e-26	N/A	N/A
structural_annotation	UHGV-1453932_2	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_3	658655.HMPREF0988_00918	90.1	6.46e-23	N/A	N/A
PHROG	UHGV-1453932_4	phrog_16490	176.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1453932_4	397290.C810_01328	201.0	0	N/A	N/A
UniRef90	UHGV-1453932_5	UniRef90_R7B8I7	84.3	1.99e-20	Ribbon-helix-helix protein CopG family	N/A
eggNOG-mapper	UHGV-1453932_5	663952.SDD27957_09060	50.1	0.000000134	N/A	N/A
Pfam	UHGV-1453932_5	PF12651	N/A	N/A	Ribbon-helix-helix domain	RHH_3
structural_annotation	UHGV-1453932_5	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1453932_7	K07741	65.7	1.4e-18	antB; anti-repressor protein	N/A
PHROG	UHGV-1453932_7	phrog_373	93.0	3.7e-27	anti-repressor	transcription regulation
UniRef90	UHGV-1453932_7	UniRef90_A0A416G2X7	359.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-1453932_7	552396.HMPREF0863_00756	202.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-1453932_7	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1453932_7	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1453932_7	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_8	phrog_20016	162.7	0	N/A	unknown function
UniRef90	UHGV-1453932_8	UniRef90_A0A345BPX4	129.0	9.38e-36	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1453932_8	1235790.C805_00062	167.0	0	N/A	N/A
structural_annotation	UHGV-1453932_8	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_9	658655.HMPREF0988_00915	88.6	3.45e-19	N/A	N/A
PHROG	UHGV-1453932_10	phrog_1233	58.5	1.2e-16	N/A	unknown function
UniRef90	UHGV-1453932_10	UniRef90_A0A345BPX6	89.7	4.12e-21	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1453932_10	658655.HMPREF0988_00914	101.0	2.17e-26	N/A	N/A
Pfam	UHGV-1453932_10	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1453932_14	PF20593	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_15	908337.HMPREF9257_0254	66.2	0.00000000000116	N/A	N/A
eggNOG-mapper	UHGV-1453932_19	658655.HMPREF0988_00895	129.0	1.97e-35	N/A	N/A
structural_annotation	UHGV-1453932_19	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_20	phrog_236	54.6	0.0000000000000024	nucleotide kinase	other
UniRef90	UHGV-1453932_20	UniRef90_A0A412RQV8	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-1453932_20	1123263.AUKY01000015_gene1590	64.7	0.00000000000758	N/A	N/A
Pfam	UHGV-1453932_20	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1453932_20	PF11753	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_22	1397699.JNIS01000001_gene2447	106.0	3.89e-25	Conserved phage C-terminus (Phg_2220_C)	N/A
PHROG	UHGV-1453932_24	phrog_589	46.6	0.00000000000057	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1453932_24	UniRef90_A0A8D9PGN5	286.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1453932_24	525378.HMPREF0793_1846	57.8	0.0000000977	endonuclease activity	N/A
Pfam	UHGV-1453932_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1453932_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1453932_24	PF01844	N/A	N/A	N/A	N/A
UniRef90	UHGV-1453932_25	UniRef90_A0A8D9PGW1	55.8	0.00000000607	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1453932_25	PF05225,COG2886	N/A	N/A	N/A	N/A
UniRef90	UHGV-1453932_34	UniRef90_UPI0011072322	75.1	0.00000000000000407	N/A	N/A
eggNOG-mapper	UHGV-1453932_34	1256908.HMPREF0373_00479	74.7	8.92e-16	N/A	N/A
structural_annotation	UHGV-1453932_34	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_35	phrog_38	144.3	8.1976e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1453932_35	UniRef90_A0A352SH30	1009.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1453932_35	397290.C810_01390	679.0	0	chromosome segregation	N/A
COG	UHGV-1453932_35	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1453932_35	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_36	phrog_36	57.1	3.7e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1453932_36	397290.C810_01391	167.0	0	N/A	N/A
structural_annotation	UHGV-1453932_36	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-1453932_37	UniRef90_A0A8D9UIR9	77.4	2.69e-17	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-1453932_38	phrog_64	152.6	1.4013e-45	portal protein	head and packaging
UniRef90	UHGV-1453932_38	UniRef90_A0A412RQZ0	935.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1453932_38	1232453.BAIF02000058_gene1625	339.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1453932_38	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1453932_38	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_39	phrog_2662	56.5	3e-16	portal protein	head and packaging
UniRef90	UHGV-1453932_39	UniRef90_A0A412RR50	392.0	0	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-1453932_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
structural_annotation	UHGV-1453932_39	PF04233,TIGR01641	N/A	N/A	N/A	N/A
UniRef90	UHGV-1453932_40	UniRef90_R6C0B6	95.5	6.11e-21	Phage capsid scaffolding protein	N/A
structural_annotation	UHGV-1453932_40	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_41	phrog_909	51.7	0.000000000000014	major head protein	head and packaging
eggNOG-mapper	UHGV-1453932_41	1298920.KI911353_gene2661	124.0	3.27e-35	N/A	N/A
PHROG	UHGV-1453932_42	phrog_29	164.0	0	major head protein	head and packaging
UniRef90	UHGV-1453932_42	UniRef90_UPI001D02C54B	679.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1453932_42	1298920.KI911353_gene2660	350.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1453932_42	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1453932_42	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1453932_43	UniRef90_A0A416G2T8	51.2	0.00000107	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1453932_43	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_44	397290.C810_01402	64.7	0.00000000000882	N/A	N/A
PHROG	UHGV-1453932_45	phrog_4105	76.2	5e-24	N/A	unknown function
eggNOG-mapper	UHGV-1453932_45	411459.RUMOBE_00911	142.0	1.3004e-42	N/A	N/A
PHROG	UHGV-1453932_46	phrog_1129	76.3	2.5e-22	holin	lysis
UniRef90	UHGV-1453932_46	UniRef90_A0A412RR82	167.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1453932_46	411461.DORFOR_00721	88.6	5.68e-22	N/A	N/A
Pfam	UHGV-1453932_46	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1453932_46	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_47	1298920.KI911353_gene2656	62.4	0.000000000202	N/A	N/A
structural_annotation	UHGV-1453932_47	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1453932_48	1232453.BAIF02000058_gene1631	122.0	1.26e-32	N/A	N/A
AcrCatalog	UHGV-1453932_48	cluster_24841	154.0	0	NA	N/A
structural_annotation	UHGV-1453932_49	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1453932_50	UniRef90_R7BGF5	92.0	1.58e-20	Phage tail protein	N/A
structural_annotation	UHGV-1453932_50	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-1453932_53	K07273	156.7	0	acm; lysozyme	N/A
PHROG	UHGV-1453932_53	phrog_291	132.3	4.3e-39	endolysin	lysis
UniRef90	UHGV-1453932_53	UniRef90_A0A174GRH8	570.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1453932_53	1235800.C819_00458	231.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1453932_53	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1453932_53	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1453932_53	PF01183,PF01471,MF_01672,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_54	phrog_1535	219.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1453932_54	1232443.BAIA02000078_gene18	218.0	0	phage tail tape measure protein	N/A
COG	UHGV-1453932_54	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1453932_55	phrog_1194	119.2	1.9e-35	N/A	unknown function
eggNOG-mapper	UHGV-1453932_55	997830.HMPREF1124_0608	85.5	5.94e-20	N/A	N/A
Pfam	UHGV-1453932_55	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1453932_55	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1453932_56	K07486	145.7	4.30199e-43	K07486; transposase	N/A
PHROG	UHGV-1453932_56	phrog_2199	325.8	0	transposase	integration and excision
UniRef90	UHGV-1453932_56	UniRef90_R9IQ34	796.0	0	DEDD_Tnp_IS110 domain-containing protein	N/A
eggNOG-mapper	UHGV-1453932_56	742765.HMPREF9457_03802	847.0	0	Transposase IS116/IS110/IS902 family	N/A
Pfam	UHGV-1453932_56	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
Pfam	UHGV-1453932_56	PF02371	N/A	N/A	Transposase IS116/IS110/IS902 family	Transposase_20
NCBIFam	UHGV-1453932_56	NF033542.1	N/A	N/A	IS110 family transposase	N/A
COG	UHGV-1453932_56	COG3547	N/A	N/A	Transposase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1453932	Yes	34,520	38	59	1