vOTU vOTU-146671

vOTU: vOTU-146671

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-146671
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-02385 → vGENUS-02857 → vOTU-146671
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900548795
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0204794
Biosample ID	N/A
Genome length (bp)	28,962 bps
CheckV completeness	72.29% (Medium-quality)
CDS count	33
CDS density	91.55%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900548795	Total connections	5	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0204794_1	phrog_924	43.9	0.0000000000048	N/A	unknown function
Pfam	UHGV-0204794_1	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0204794_1	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0204794_2	PF06289,COG1582	N/A	N/A	N/A	N/A
KOfam	UHGV-0204794_5	K03111	55.4	0.0000000000000016	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0204794_5	phrog_44	78.8	1.1e-22	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0204794_5	UniRef90_A8MHY9	70.9	0.000000000000385	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0204794_5	350688.Clos_1881	70.9	0.0000000000000646	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0204794_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0204794_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0204794_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0204794_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0204794_6	K01160	63.2	6.7e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0204794_6	phrog_140	118.1	5.9e-35	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0204794_6	UniRef90_D4N1J6	137.0	1.07e-38	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0204794_6	411459.RUMOBE_01038	115.0	6.28e-31	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-0204794_6	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0204794_6	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0204794_6	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0204794_10	UniRef90_U2R3E6	51.2	0.000000843	KORA domain-containing protein	N/A
structural_annotation	UHGV-0204794_10	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0204794_11	1519439.JPJG01000011_gene53	267.0	0	N/A	N/A
eggNOG-mapper	UHGV-0204794_13	1519439.JPJG01000011_gene57	122.0	1.29e-33	N/A	N/A
structural_annotation	UHGV-0204794_13	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0204794_14	UniRef90_A0A4D7ASB8	296.0	0	N/A	N/A
eggNOG-mapper	UHGV-0204794_14	693746.OBV_01680	325.0	0	N/A	N/A
structural_annotation	UHGV-0204794_14	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-0204794_15	K06909	72.5	3.1e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0204794_15	phrog_979	64.4	4.2e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0204794_15	UniRef90_A0A810QAS9	448.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0204794_15	693746.OBV_01690	438.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0204794_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0204794_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
KOfam	UHGV-0204794_16	K07273	142.2	4.69996e-42	acm; lysozyme	N/A
PHROG	UHGV-0204794_16	phrog_291	126.2	3.1e-37	endolysin	lysis
UniRef90	UHGV-0204794_16	UniRef90_UPI00177FDC19	170.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0204794_16	411470.RUMGNA_00451	140.0	7.94e-37	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-0204794_16	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0204794_16	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0204794_16	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0204794_17	phrog_443	64.5	2.4e-18	holin	lysis
Pfam	UHGV-0204794_17	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0204794_17	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0204794_18	phrog_1863	60.7	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0204794_18	665956.HMPREF1032_03922	86.3	7.85e-21	N/A	N/A
PHROG	UHGV-0204794_22	phrog_156	93.3	2.5e-28	portal protein	head and packaging
eggNOG-mapper	UHGV-0204794_22	693746.OBV_01670	449.0	0	N/A	N/A
structural_annotation	UHGV-0204794_22	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0204794_23	phrog_374	189.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0204794_23	673376.F2VHW3_9CAUD	150.0	8.82818e-43	sequence-specific DNA binding transcription factor activity	N/A
structural_annotation	UHGV-0204794_23	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0204794_26	phrog_422	110.5	1.4e-32	major head protein	head and packaging
UniRef90	UHGV-0204794_26	UniRef90_A0A8J6JH37	244.0	0	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0204794_26	1408437.JNJN01000001_gene1710	189.0	0	N/A	N/A
Pfam	UHGV-0204794_26	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0204794_26	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0204794_30	phrog_15863	145.9	1.30321e-43	N/A	unknown function
UniRef90	UHGV-0204794_30	UniRef90_A0A1Y3R3M0	188.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0204794_30	693746.OBV_01780	176.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0204794_30	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
KOfam	UHGV-0204794_33	K14059	75.2	1.2e-21	int; integrase	N/A
PHROG	UHGV-0204794_33	phrog_1	66.1	6.2e-19	integrase	integration and excision
UniRef90	UHGV-0204794_33	UniRef90_UPI001C0FC483	181.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0204794_33	445972.ANACOL_01797	134.0	3.12e-36	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0204794_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0204794_33	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0204794	Yes	28,962	58	72	1