vOTU vOTU-146775

vOTU: vOTU-146775

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-146775
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00524 → vOTU-146775
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0179438
Biosample ID	SAMN09781780
Genome length (bp)	26,861 bps
CheckV completeness	67.35% (Medium-quality)
CDS count	57
CDS density	98.16%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	13	Host agreement	92.31
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0179438_3	phrog_4973	65.1	9.6e-19	N/A	unknown function
UniRef90	UHGV-0179438_3	UniRef90_A0A3D3Y5F2	156.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0179438_3	584708.Apau_1668	58.9	0.000000000241	Helix-turn-helix domain	N/A
Pfam	UHGV-0179438_3	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0179438_3	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_6	phrog_14970	200.0	0	N/A	unknown function
UniRef90	UHGV-0179438_6	UniRef90_A0A3P6JH63	152.0	1.41952e-42	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-0179438_6	397291.C804_03856	153.0	3.33509e-43	double-strand break repair protein	N/A
Pfam	UHGV-0179438_6	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0179438_6	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0179438_6	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_7	phrog_72	55.7	7.7e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0179438_7	445972.ANACOL_00148	166.0	0	N/A	N/A
structural_annotation	UHGV-0179438_7	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179438_8	UniRef90_A0A3D1LDS4	128.0	9.92e-37	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0179438_8	445972.ANACOL_01826	89.7	2.04e-22	HNH nucleases	N/A
Pfam	UHGV-0179438_8	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0179438_9	phrog_7545	88.8	6.8e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179438_9	UniRef90_A0A417H726	156.0	2.8026e-45	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0179438_9	521000.PROVRETT_05968	61.6	0.00000000442	HNH endonuclease	N/A
Pfam	UHGV-0179438_9	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0179438_9	PF13392,PF13384,TIGR04381,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0179438_10	K03111	134.1	1.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0179438_10	phrog_44	139.8	1.70006e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179438_10	UniRef90_R6LLA3	164.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0179438_10	445972.ANACOL_00151	155.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0179438_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0179438_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0179438_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0179438_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0179438_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_11	phrog_9327	97.0	3.8e-29	primosomal protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179438_11	UniRef90_A0A6G7Y1V7	101.0	3.04e-22	YdaU family protein	N/A
eggNOG-mapper	UHGV-0179438_11	1449126.JQKL01000003_gene1705	94.0	6.06e-20	ROK family	N/A
COG	UHGV-0179438_11	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0179438_11	PF07120,COG3756	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179438_12	UniRef90_A0A1C6GBI4	55.5	0.00000291	DNA polymerase III subunit beta	N/A
structural_annotation	UHGV-0179438_12	PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
KOfam	UHGV-0179438_14	K01160	51.1	0.00000000000004	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
UniRef90	UHGV-0179438_14	UniRef90_A0A1V5ZUM0	115.0	1.46e-30	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-0179438_14	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_15	phrog_3136	127.4	4.9e-38	N/A	unknown function
UniRef90	UHGV-0179438_15	UniRef90_A0A3D0HBD2	128.0	6.18e-34	ASCH domain-containing protein	N/A
COG	UHGV-0179438_15	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0179438_15	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_17	phrog_757	224.1	0	DNA methyltransferase	other
UniRef90	UHGV-0179438_17	UniRef90_UPI0006A41431	249.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0179438_17	1235790.C805_00032	266.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0179438_17	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0179438_17	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179438_18	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_19	phrog_5781	79.1	5.6e-23	N/A	unknown function
UniRef90	UHGV-0179438_19	UniRef90_A0A2V2GDQ1	119.0	8.35e-33	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0179438_19	573061.Clocel_3558	96.7	1.23e-24	N/A	N/A
Pfam	UHGV-0179438_19	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0179438_19	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0179438_19	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_21	phrog_38832	96.3	2.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0179438_21	665956.HMPREF1032_00143	100.0	1.09e-24	N/A	N/A
structural_annotation	UHGV-0179438_21	PF11717,TIGR02450	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179438_25	UniRef90_A0A374AB28	178.0	0	Thymidylate synthase ThyX	N/A
eggNOG-mapper	UHGV-0179438_25	935948.KE386495_gene2250	92.0	4.31e-21	N/A	N/A
Pfam	UHGV-0179438_25	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0179438_25	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_29	phrog_801	82.9	4.6e-24	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0179438_29	UniRef90_A0A2K9P078	109.0	3.56e-29	N/A	N/A
eggNOG-mapper	UHGV-0179438_29	1297570.MESS4_510075	52.0	0.0000022	N/A	N/A
Pfam	UHGV-0179438_29	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0179438_29	PF18909	N/A	N/A	N/A	N/A
KOfam	UHGV-0179438_33	K23779	52.4	0.000000000000012	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0179438_33	phrog_8	65.6	1.1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0179438_33	UniRef90_UPI0018989C77	99.4	6.63e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0179438_33	1246484.D479_07192	68.6	0.0000000000000782	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0179438_33	retron_type_VI_hth_cluster2_1	42.2	0.000000000023	N/A	Retron
Pfam	UHGV-0179438_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0179438_33	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0179438_33	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0179438_34	K07319	120.8	1.3e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0179438_34	phrog_498	429.2	0	DNA methyltransferase	other
UniRef90	UHGV-0179438_34	UniRef90_UPI0012DE0D94	434.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0179438_34	1423758.BN55_01455	420.0	0	DNA methylase	N/A
PADLOC	UHGV-0179438_34	MTase_II_00015	221.6	0	Type II methyltransferase	RM
Pfam	UHGV-0179438_34	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0179438_34	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0179438_34	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0179438_34	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0179438_36	K06909	113.6	2.1e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0179438_36	phrog_10250	136.9	1.10001e-40	N/A	unknown function
UniRef90	UHGV-0179438_36	UniRef90_A0A1I3QR69	458.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0179438_36	748224.HMPREF9436_03341	340.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0179438_36	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0179438_36	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0179438_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0179438_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0179438_36	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_37	phrog_64	168.5	0	portal protein	head and packaging
UniRef90	UHGV-0179438_37	UniRef90_UPI001AA0B7FF	498.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0179438_37	673376.F2VHW1_9CAUD	239.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0179438_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0179438_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179438_38	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_41	phrog_10898	279.8	0	N/A	unknown function
UniRef90	UHGV-0179438_41	UniRef90_A0A7U3NJT3	191.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0179438_41	717606.PaecuDRAFT_2136	62.0	0.0000000256	S-layer homology domain	N/A
COG	UHGV-0179438_41	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-0179438_41	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179438_42	PF16408,NF033510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0179438_45	1519439.JPJG01000060_gene1895	111.0	4.1e-28	N/A	N/A
structural_annotation	UHGV-0179438_45	PF10618	N/A	N/A	N/A	N/A
KOfam	UHGV-0179438_46	K18454	42.3	0.0000000000093	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0179438_46	phrog_30034	69.5	6.3e-20	N/A	unknown function
UniRef90	UHGV-0179438_46	UniRef90_A0A1C5VT90	141.0	1.06e-40	Chitinase A1	N/A
eggNOG-mapper	UHGV-0179438_46	1154860.SAG0136_08155	125.0	4.66e-34	N/A	N/A
Pfam	UHGV-0179438_46	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0179438_46	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_47	phrog_595	102.7	3.4e-31	head maturation protease	head and packaging
UniRef90	UHGV-0179438_47	UniRef90_A0A3D3Y165	400.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0179438_47	1504822.CCNO01000013_gene286	199.0	0	cell adhesion	N/A
Pfam	UHGV-0179438_47	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0179438_47	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179438_47	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_48	phrog_5	68.0	1.9e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-0179438_48	UniRef90_A0A7X5E1T2	173.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0179438_48	1280685.AUKC01000004_gene1630	99.0	1.03e-24	N/A	N/A
Pfam	UHGV-0179438_48	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0179438_48	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0179438_48	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_49	phrog_194	50.5	0.000000000000042	head scaffolding protein	head and packaging
UniRef90	UHGV-0179438_49	UniRef90_A0A6B9SU02	119.0	2.74e-30	Fibronectin autolysin	N/A
structural_annotation	UHGV-0179438_49	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_50	phrog_544	181.6	0	major head protein	head and packaging
UniRef90	UHGV-0179438_50	UniRef90_A0A810PZM2	634.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0179438_50	1347392.CCEZ01000005_gene1236	283.0	0	N/A	N/A
Pfam	UHGV-0179438_50	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0179438_50	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_52	phrog_17977	77.2	1.5e-22	N/A	unknown function
UniRef90	UHGV-0179438_52	UniRef90_UPI00141211AB	110.0	5.72e-29	head-tail adaptor protein	N/A
structural_annotation	UHGV-0179438_52	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_53	phrog_17405	49.3	0.000000000000079	head protein	head and packaging
structural_annotation	UHGV-0179438_53	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_54	phrog_885	78.9	5.6e-23	major tail protein	tail
UniRef90	UHGV-0179438_54	UniRef90_A0A843J9F0	197.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0179438_54	1504822.CCNO01000012_gene492	254.0	0	N/A	N/A
structural_annotation	UHGV-0179438_54	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0179438_55	phrog_18646	59.1	7e-17	N/A	unknown function
UniRef90	UHGV-0179438_55	UniRef90_B6CXF0	68.2	0.00000000000222	Peptidase-colicin	N/A
PHROG	UHGV-0179438_57	phrog_23464	271.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0179438_57	665950.HMPREF1025_02660	237.0	0	phage tail tape measure protein	N/A
COG	UHGV-0179438_57	COG5283	N/A	N/A	Phage-related tail protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0179438	Yes	26,861	53	67	1