vOTU vOTU-147971

vOTU: vOTU-147971

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-147971
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-01874 → vGENUS-02079 → vOTU-147971
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0003894
Biosample ID	SAMEA4765703
Genome length (bp)	33,693 bps
CheckV completeness	61.97% (Medium-quality)
CDS count	30
CDS density	90.27%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	86	Host agreement	96.51
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	16	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0003894_1	UniRef90_A0A0M2NI16	244.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-0003894_1	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_3	phrog_541	101.5	5.3e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0003894_3	476272.RUMHYD_01778	115.0	7.03e-31	N/A	N/A
PHROG	UHGV-0003894_4	phrog_3366	82.3	6.1e-24	N/A	unknown function
structural_annotation	UHGV-0003894_4	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_5	phrog_556	69.9	2.8e-20	minor head protein	head and packaging
UniRef90	UHGV-0003894_5	UniRef90_A0A1H7MNM8	143.0	7.94004e-41	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0003894_5	999413.HMPREF1094_00212	60.5	0.00000000184	Minor capsid protein	N/A
Pfam	UHGV-0003894_5	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0003894_5	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_6	phrog_3266	50.5	0.000000000000024	tail completion	connector
eggNOG-mapper	UHGV-0003894_6	476272.RUMHYD_01781	149.0	2.07392e-43	N/A	N/A
structural_annotation	UHGV-0003894_6	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_7	phrog_3099	124.8	5.5e-37	N/A	unknown function
eggNOG-mapper	UHGV-0003894_7	33035.JPJF01000106_gene3126	181.0	0	N/A	N/A
structural_annotation	UHGV-0003894_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_8	phrog_11299	87.4	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0003894_8	1449050.JNLE01000003_gene3883	72.4	0.000000000000111	N/A	N/A
PHROG	UHGV-0003894_9	phrog_706	134.5	6.8e-40	N/A	unknown function
UniRef90	UHGV-0003894_9	UniRef90_A0A1H7MNA7	220.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0003894_9	411459.RUMOBE_01383	194.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0003894_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0003894_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_10	phrog_1535	226.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0003894_10	411459.RUMOBE_01384	186.0	1.4013e-44	phage tail tape measure protein	N/A
Pfam	UHGV-0003894_10	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
COG	UHGV-0003894_10	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0003894_11	phrog_1194	67.6	1.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0003894_11	394503.Ccel_3034	59.7	0.000000000923	N/A	N/A
structural_annotation	UHGV-0003894_11	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_12	phrog_6616	72.8	3.1e-21	tail protein	tail
eggNOG-mapper	UHGV-0003894_12	1235797.C816_04180	78.6	0.000000000000148	N/A	N/A
structural_annotation	UHGV-0003894_12	PF16466,NF033848,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0003894_13	K21449	67.7	1.2e-21	ata, sadA, emaA; trimeric autotransporter adhesin	N/A
PHROG	UHGV-0003894_13	phrog_14959	157.0	0	N/A	unknown function
UniRef90	UHGV-0003894_13	UniRef90_A0A416KIC2	1114.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003894_13	657322.FPR_22010	1102.0	0	N/A	N/A
Pfam	UHGV-0003894_13	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0003894_14	PF05635,NF008911	N/A	N/A	N/A	N/A
KOfam	UHGV-0003894_15	K00986	71.1	1.3e-20	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0003894_15	phrog_1423	146.6	2.20004e-43	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003894_15	UniRef90_A0A1G5AFK2	258.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
eggNOG-mapper	UHGV-0003894_15	1121866.AUGK01000024_gene790	161.0	1.26958e-42	reverse transcriptase	N/A
PADLOC	UHGV-0003894_15	icity0040	55.7	0.0000000000000011	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0003894_15	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0003894_15	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0003894_15	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_17	phrog_1382	67.4	9.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0003894_17	1410650.JHWL01000003_gene2818	72.8	2.17e-16	N/A	N/A
PHROG	UHGV-0003894_18	phrog_937	73.5	2.7e-21	hemolysin	other
eggNOG-mapper	UHGV-0003894_18	478749.BRYFOR_07561	126.0	1.24e-36	N/A	N/A
KOfam	UHGV-0003894_19	K08640	101.2	4.9e-32	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0003894_19	phrog_2649	100.5	2.1e-30	endolysin	lysis
UniRef90	UHGV-0003894_19	UniRef90_UPI001A9BC0D1	283.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0003894_19	1121423.JONT01000035_gene915	102.0	2.35e-24	N/A	N/A
Pfam	UHGV-0003894_19	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0003894_19	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0003894_19	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003894_19	PF05951,PF01471,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_21	phrog_13712	85.5	7.3e-25	holin	lysis
UniRef90	UHGV-0003894_21	UniRef90_A0A2P8EL22	87.8	2.86e-19	Superfamily 6 holin (LLH)	N/A
eggNOG-mapper	UHGV-0003894_21	1203606.HMPREF1526_00252	77.0	4.92e-16	N/A	N/A
structural_annotation	UHGV-0003894_21	PF09682,TIGR01673	N/A	N/A	N/A	N/A
KOfam	UHGV-0003894_23	K03651	49.6	0.000000000000047	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
UniRef90	UHGV-0003894_23	UniRef90_A0A173TPN5	1830.0	0	Predicted NTPase (NACHT family)	N/A
eggNOG-mapper	UHGV-0003894_23	1235788.C802_03542	700.0	0	Calcineurin-like phosphoesterase	N/A
PADLOC	UHGV-0003894_23	Effector_00074	107.3	1.8e-31	Endonuclease	CBASS
Pfam	UHGV-0003894_23	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0003894_23	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A
KOfam	UHGV-0003894_24	K03271	54.0	0.0000000000000029	gmhA, lpcA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]	N/A
UniRef90	UHGV-0003894_24	UniRef90_A0A6L3ILU7	92.8	1.7e-23	SIS domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0003894_24	657322.FPR_02690	110.0	6.71e-30	SIS domain	N/A
COG	UHGV-0003894_24	COG0279	N/A	N/A	Phosphoheptose isomerase	N/A
PHROG	UHGV-0003894_26	phrog_1362	100.2	2e-29	N/A	unknown function
UniRef90	UHGV-0003894_26	UniRef90_A0A2T3FUZ0	397.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003894_26	1341157.RF007C_02800	317.0	0	N/A	N/A
Pfam	UHGV-0003894_26	PF06067	N/A	N/A	N/A	DUF932
UniRef90	UHGV-0003894_28	UniRef90_A0A416W781	141.0	1.36e-36	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0003894_28	702437.HMPREF9432_00909	88.2	3.93e-17	N/A	N/A
structural_annotation	UHGV-0003894_28	PF13560,NF040507,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0003894_29	phrog_4031	79.2	4.1e-23	N/A	unknown function
UniRef90	UHGV-0003894_29	UniRef90_UPI001CBC5D3F	301.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0003894_29	706434.HMPREF9429_01138	86.3	2.72e-18	nucleotide metabolic process	N/A
Pfam	UHGV-0003894_29	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0003894_29	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
eggNOG-mapper	UHGV-0003894_30	1226325.HMPREF1548_03500	353.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0003894	Yes	33,693	53	62	1