vOTU vOTU-148020

vOTU: vOTU-148020

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-148020
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-17359 → vOTU-148020
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0156283
Biosample ID	SAMN06110428
Genome length (bp)	31,167 bps
CheckV completeness	69.48% (Medium-quality)
CDS count	41
CDS density	90.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0156283_1	phrog_1686	69.4	3.7e-20	tail length tape measure protein	tail
PHROG	UHGV-0156283_2	phrog_1194	101.4	6.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0156283_2	585501.HMPREF6123_0824	127.0	2.68e-36	N/A	N/A
Pfam	UHGV-0156283_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0156283_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_3	phrog_13879	277.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0156283_3	1235800.C819_00474	513.0	0	N/A	N/A
structural_annotation	UHGV-0156283_3	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_4	phrog_18725	67.8	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0156283_4	585501.HMPREF6123_0822	98.6	1.75e-24	N/A	N/A
eggNOG-mapper	UHGV-0156283_5	1298920.KI911353_gene4837	54.7	0.00000121	N/A	N/A
PHROG	UHGV-0156283_6	phrog_5302	240.8	0	tail protein	tail
UniRef90	UHGV-0156283_6	UniRef90_R6M197	201.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0156283_6	742740.HMPREF9474_02337	112.0	4.62e-23	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0156283_6	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0156283_6	PF07210,PF13620,PF16893,NF040788,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_9	phrog_4105	98.2	5.4e-29	N/A	unknown function
UniRef90	UHGV-0156283_9	UniRef90_A0A8D9UHA9	108.0	1.23e-28	Holin protein	N/A
eggNOG-mapper	UHGV-0156283_9	742733.HMPREF9469_05011	119.0	9.23e-34	N/A	N/A
KOfam	UHGV-0156283_11	K01447	60.0	5.4e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0156283_11	phrog_20388	237.3	0	endolysin	lysis
UniRef90	UHGV-0156283_11	UniRef90_A0A374UNP8	394.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0156283_11	1203606.HMPREF1526_01931	297.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0156283_11	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0156283_11	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0156283_11	PF01510,PF01476,PF15591,MF_02014,MF_04111,MF_01354,NF008758,NF010723,TIGR00405,COG3023,COG5004,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_12	phrog_17876	91.2	1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0156283_12	537007.BLAHAN_04259	78.6	1.52e-17	N/A	N/A
PHROG	UHGV-0156283_13	phrog_6918	91.0	9.5e-27	holin	lysis
UniRef90	UHGV-0156283_13	UniRef90_A0A6N8H4C3	118.0	1.87e-32	Holin	N/A
eggNOG-mapper	UHGV-0156283_13	1297617.JPJD01000020_gene301	115.0	4.75e-32	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0156283_13	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-0156283_13	TIGR01673.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0156283_13	PF09682,TIGR01673	N/A	N/A	N/A	N/A
KOfam	UHGV-0156283_14	K06400	389.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0156283_14	phrog_95	378.7	0	integrase	integration and excision
UniRef90	UHGV-0156283_14	UniRef90_UPI00164E9A6A	579.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0156283_14	411483.FAEPRAA2165_02542	390.0	0	N/A	N/A
Pfam	UHGV-0156283_14	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0156283_14	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0156283_14	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0156283_14	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0156283_14	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_15	phrog_8	51.0	0.000000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-0156283_15	UniRef90_A0A857HBU3	60.5	0.0000000322	Repressor protein	N/A
eggNOG-mapper	UHGV-0156283_15	565664.EFXG_01808	59.3	0.00000000623	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0156283_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0156283_18	K08309	59.7	6.8e-17	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0156283_18	phrog_19349	162.9	0	N/A	unknown function
UniRef90	UHGV-0156283_18	UniRef90_D7GXC0	147.0	1.06e-40	Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains)	N/A
eggNOG-mapper	UHGV-0156283_18	742740.HMPREF9474_02375	128.0	6.64e-34	lytic transglycosylase activity	N/A
Pfam	UHGV-0156283_18	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0156283_18	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0156283_18	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_19	phrog_9958	221.4	0	N/A	unknown function
UniRef90	UHGV-0156283_19	UniRef90_A0A5D8QJA0	196.0	0	Mucin-5AC	N/A
eggNOG-mapper	UHGV-0156283_19	552398.HMPREF0866_01642	157.0	2.8026e-45	cellulase activity	N/A
Pfam	UHGV-0156283_19	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0156283_19	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0156283_19	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_21	phrog_843	40.2	0.000000000029	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_21	UniRef90_D7GXC2	197.0	0	Archaeal holliday junction resolvase (Hjc)	N/A
eggNOG-mapper	UHGV-0156283_21	1232453.BAIF02000010_gene3342	119.0	1.43e-32	Recombination protein U	N/A
Pfam	UHGV-0156283_21	PF01870	N/A	N/A	Archaeal holliday junction resolvase (hjc)	Hjc
structural_annotation	UHGV-0156283_21	PF03838,MF_01490,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0156283_22	K18959	214.2	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-0156283_22	phrog_16	202.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_22	UniRef90_A0A849CVE0	672.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0156283_22	1232453.BAIF02000010_gene3343	542.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-0156283_22	mREase_IV_00004	41.3	0.0000000000012	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0156283_22	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0156283_22	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0156283_22	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0156283_22	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_23	phrog_4578	65.0	1.3e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_23	UniRef90_UPI001627B123	56.2	0.0000000166	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0156283_23	1034347.CAHJ01000080_gene1214	72.8	0.00000000000000543	N/A	N/A
Pfam	UHGV-0156283_23	PF00847	N/A	N/A	AP2 domain	AP2
KOfam	UHGV-0156283_24	K00558	155.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0156283_24	phrog_116	168.1	0	DNA methyltransferase	other
UniRef90	UHGV-0156283_24	UniRef90_G9WTJ8	315.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0156283_24	1408415.JHXL01000003_gene1146	251.0	0	COG0270 Site-specific DNA methylase	N/A
PADLOC	UHGV-0156283_24	MTase_II_00058	183.7	0	Type II methyltransferase	RM
Pfam	UHGV-0156283_24	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0156283_24	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0156283_24	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0156283_24	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0156283_25	K00558	43.0	0.0000000000045	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0156283_25	phrog_17284	79.2	5.6e-23	N/A	unknown function
UniRef90	UHGV-0156283_25	UniRef90_UPI001C0E1B0C	93.6	6.71e-23	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0156283_25	1121871.AUAT01000002_gene1371	90.5	2.07e-20	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0156283_25	oMTase_00023	79.5	9.1e-23	orphan methyltransferase	RM
Pfam	UHGV-0156283_25	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0156283_25	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0156283_26	phrog_1252	470.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_26	UniRef90_UPI00189DB5D1	736.0	0	DNA polymerase elongation subunit (family B)	N/A
eggNOG-mapper	UHGV-0156283_26	1121866.AUGK01000003_gene1403	525.0	0	DNA replication proofreading	N/A
COG	UHGV-0156283_26	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-0156283_26	PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_27	phrog_155	72.6	6.1e-21	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_27	UniRef90_UPI001A9A8367	187.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0156283_27	1151292.QEW_4381	89.7	4.32e-19	ERF superfamily	N/A
Pfam	UHGV-0156283_27	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0156283_27	PF04404	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_28	phrog_434	103.6	2.1e-30	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_28	UniRef90_UPI00164ECEF5	515.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0156283_28	1219626.HMPREF1639_07320	346.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0156283_28	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0156283_28	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0156283_28	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0156283_29	cluster_73853	36.2	0.000000305	NA	N/A
structural_annotation	UHGV-0156283_31	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_32	phrog_1485	102.3	6.1e-30	N/A	unknown function
UniRef90	UHGV-0156283_32	UniRef90_UPI00164CE11C	162.0	0	nucleotide modification associated domain-containing protein	N/A
eggNOG-mapper	UHGV-0156283_32	1415774.U728_1099	107.0	2.83e-29	N/A	N/A
Pfam	UHGV-0156283_32	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
KOfam	UHGV-0156283_33	K03465	188.8	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0156283_33	phrog_85	134.4	7.5e-40	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_33	UniRef90_A0A1Y3WR29	301.0	0	Thymidylate synthase (FAD)	N/A
eggNOG-mapper	UHGV-0156283_33	720554.Clocl_3035	269.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-0156283_33	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0156283_33	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0156283_33	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0156283_33	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_36	phrog_1829	119.8	1.8e-35	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_36	UniRef90_UPI001899186E	312.0	0	primase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0156283_36	1121866.AUGK01000003_gene1409	216.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0156283_36	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-0156283_36	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-0156283_36	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_38	phrog_1156	307.3	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156283_38	UniRef90_H1CER1	788.0	0	Phage/plasmid primase, P4 family domain-containing protein	N/A
eggNOG-mapper	UHGV-0156283_38	649747.HMPREF0083_00553	332.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0156283_38	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0156283_38	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0156283_38	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0156283_38	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0156283_38	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0156283_38	PF08706,PF05272,PF02257,MF_04000,NF005477,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-0156283_39	phrog_606	42.5	0.0000000000048	terminase small subunit	head and packaging
UniRef90	UHGV-0156283_39	UniRef90_UPI001D08D6B6	173.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0156283_39	1235802.C823_05975	70.5	0.00000000000173	N/A	N/A
Pfam	UHGV-0156283_39	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0156283_40	K03466	234.2	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0156283_40	phrog_1358	196.6	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0156283_40	UniRef90_A0A1C5UE43	254.0	0	Stage III sporulation protein E	N/A
eggNOG-mapper	UHGV-0156283_40	589865.DaAHT2_1274	159.0	1.10997e-41	DNA segregation ATPase, FtsK SpoIIIE family	N/A
PADLOC	UHGV-0156283_40	SspH_00004	109.6	2.6e-32	SspH	SSP
Pfam	UHGV-0156283_40	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0156283_40	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0156283_40	PF01580,MF_01076,NF010404,COG0433	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0156283	Yes	31,167	48	69	1