vOTU vOTU-148386

vOTU: vOTU-148386

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-148386
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00612 → vGENUS-05144 → vOTU-148386
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0286726
Biosample ID	SAMD00114966
Genome length (bp)	40,591 bps
CheckV completeness	61.90% (Medium-quality)
CDS count	72
CDS density	90.17%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	30	Host agreement	83.33
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0286726_3	K19719	109.6	6.4e-33	COL2A; collagen type II alpha	N/A
PHROG	UHGV-0286726_3	phrog_6320	92.8	9e-30	tail fiber protein	tail
eggNOG-mapper	UHGV-0286726_3	1232452.BAIB02000007_gene1608	65.5	0.00000000592	Collagen triple helix repeat	N/A
Pfam	UHGV-0286726_3	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0286726_3	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0286726_3	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_4	phrog_26466	52.1	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0286726_4	UniRef90_UPI00034E31D3	186.0	3.50325e-44	phage tail protein	N/A
eggNOG-mapper	UHGV-0286726_4	1401067.HMPREF0872_03800	129.0	1.8e-27	cellulase activity	N/A
COG	UHGV-0286726_4	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
eggNOG-mapper	UHGV-0286726_5	1401067.HMPREF0872_03805	54.7	0.000000359	N/A	N/A
structural_annotation	UHGV-0286726_5	PF20387	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0286726_6	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_8	phrog_1328	158.4	0	major head protein	head and packaging
UniRef90	UHGV-0286726_8	UniRef90_UPI000413677B	303.0	0	N/A	N/A
eggNOG-mapper	UHGV-0286726_8	1232428.CAVO010000067_gene423	303.0	0	N/A	N/A
Pfam	UHGV-0286726_8	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0286726_8	PF17236,MF_04133,NF033394,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0286726_9	1232428.CAVO010000067_gene424	117.0	1.39e-26	N/A	N/A
PHROG	UHGV-0286726_11	phrog_1216	319.8	0	portal protein	head and packaging
UniRef90	UHGV-0286726_11	UniRef90_A0A0U1L376	474.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0286726_11	1485543.JMME01000020_gene791	564.0	0	Membrane	N/A
COG	UHGV-0286726_11	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0286726_11	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0286726_12	PF21621,MF_01255,NF009806,COG4766	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_13	phrog_355	48.7	0.00000000000011	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_13	UniRef90_A0A8J6M6I8	96.3	7.13e-24	N/A	N/A
eggNOG-mapper	UHGV-0286726_13	999411.HMPREF1092_00897	101.0	8.92e-27	N/A	N/A
Pfam	UHGV-0286726_13	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0286726_13	PF14359	N/A	N/A	N/A	N/A
KOfam	UHGV-0286726_14	K06909	88.1	1.4e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0286726_14	phrog_2	170.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0286726_14	UniRef90_UPI001D00EC11	522.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0286726_14	1401067.HMPREF0872_06820	514.0	0	Terminase-like family	N/A
Pfam	UHGV-0286726_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0286726_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0286726_14	PF03237,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_15	phrog_606	48.1	0.00000000000019	terminase small subunit	head and packaging
UniRef90	UHGV-0286726_15	UniRef90_A0A2G6UEM0	63.2	0.00000000601	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0286726_15	485915.Dret_1613	56.6	0.000000169	DNA-packaging protein gp3	N/A
Pfam	UHGV-0286726_15	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0286726_19	phrog_16683	142.9	8.39378e-43	N/A	unknown function
UniRef90	UHGV-0286726_19	UniRef90_UPI000C7E58C8	179.0	0	amidoligase family protein	N/A
eggNOG-mapper	UHGV-0286726_19	1384066.JAGT01000001_gene2548	148.0	7.41e-38	N/A	N/A
Pfam	UHGV-0286726_19	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
structural_annotation	UHGV-0286726_19	PF12224,MF_01609,NF010042,COG2170	N/A	N/A	N/A	N/A
UniRef90	UHGV-0286726_20	UniRef90_A0A6J7X5L5	103.0	5.5e-22	Gn_AT_II domain containing protein	N/A
eggNOG-mapper	UHGV-0286726_20	1401067.HMPREF0872_03875	136.0	1.29e-35	N/A	N/A
structural_annotation	UHGV-0286726_20	MF_01931,TIGR01134,COG0034	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0286726_23	1205910.B005_5545	50.8	0.00000162	N/A	N/A
PADLOC	UHGV-0286726_23	icity0043	45.2	0.0000000000038	N/A	CRISPR-CAS
eggNOG-mapper	UHGV-0286726_25	661087.HMPREF1008_00254	154.0	8.40779e-45	nuclease activity	N/A
AcrCatalog	UHGV-0286726_25	cluster_21391	46.6	0.000000016	NA	N/A
COG	UHGV-0286726_25	COG0792	N/A	N/A	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	N/A
eggNOG-mapper	UHGV-0286726_28	401526.TcarDRAFT_1279	80.5	1.38e-16	phage transcriptional regulator, RinA family	N/A
COG	UHGV-0286726_29	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
KOfam	UHGV-0286726_30	K03111	125.9	5.2e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0286726_30	phrog_44	131.9	4.9e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_30	UniRef90_A0A1Q6R563	171.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0286726_30	546271.Selsp_1347	143.0	4.93958e-42	Single-strand binding protein family	N/A
Pfam	UHGV-0286726_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0286726_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0286726_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0286726_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0286726_30	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0286726_31	UniRef90_A0A1Q6R577	364.0	0	N/A	N/A
Pfam	UHGV-0286726_31	PF18892	N/A	N/A	N/A	DUF5651
KOfam	UHGV-0286726_37	K01160	57.6	3.9e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0286726_37	phrog_140	118.1	4.9e-35	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_37	UniRef90_UPI0009884093	124.0	4.37e-33	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0286726_37	1121091.AUMP01000032_gene3086	108.0	9.04e-28	holliday junction resolvase	N/A
Pfam	UHGV-0286726_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0286726_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0286726_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0286726_42	UniRef90_A0A6N7WVF3	62.8	0.000000000838	Restriction endonuclease subunit S	N/A
KOfam	UHGV-0286726_43	K21919	72.8	4.5e-21	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0286726_43	phrog_7713	77.3	4.00001e-40	N/A	unknown function
Pfam	UHGV-0286726_43	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
structural_annotation	UHGV-0286726_43	PF13599,NF011744	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_44	phrog_10714	58.9	8.7e-17	N/A	unknown function
structural_annotation	UHGV-0286726_44	PF21173	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_45	phrog_355	54.1	0.0000000000000027	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_45	UniRef90_UPI000E473058	135.0	2.49e-39	N/A	N/A
eggNOG-mapper	UHGV-0286726_45	999411.HMPREF1092_00897	130.0	4.87e-38	N/A	N/A
Pfam	UHGV-0286726_45	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0286726_45	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_46	phrog_2776	66.9	2.4e-19	N/A	unknown function
UniRef90	UHGV-0286726_46	UniRef90_A0A2S7ZCT0	97.1	1.39e-22	DNA repair protein MmcB-related protein	N/A
eggNOG-mapper	UHGV-0286726_46	266265.Bxe_A3083	51.6	0.00000944	N/A	N/A
Pfam	UHGV-0286726_46	PF06319	N/A	N/A	DNA repair protein MmcB-like	MmcB-like
structural_annotation	UHGV-0286726_46	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_50	phrog_4856	48.3	0.00000000000016	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0286726_50	UniRef90_A0A1I0VIB3	52.8	0.00000373	MazG nucleotide pyrophosphohydrolase domain-containing protein	N/A
structural_annotation	UHGV-0286726_50	PF02888	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_51	phrog_10714	49.6	0.00000000000007	N/A	unknown function
structural_annotation	UHGV-0286726_51	PF21173	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0286726_53	PF21173	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_61	phrog_9804	69.9	3.8e-20	N/A	unknown function
UniRef90	UHGV-0286726_61	UniRef90_A0A316S7J6	112.0	9.04e-28	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0286726_61	1280706.AUJE01000046_gene1152	67.8	0.0000000000202	N/A	N/A
structural_annotation	UHGV-0286726_61	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_62	phrog_5968	144.6	5.395e-43	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_62	UniRef90_UPI0013D3F9A2	161.0	9.80909e-45	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0286726_62	469604.HMPREF0946_01101	148.0	2.21e-40	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0286726_62	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-0286726_62	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0286726_62	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
PHROG	UHGV-0286726_63	phrog_5968	45.1	0.0000000000015	replisome organizer	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0286726_63	469604.HMPREF0946_01101	66.2	0.0000000000199	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0286726_63	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
KOfam	UHGV-0286726_65	K07455	165.1	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0286726_65	phrog_148	168.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_65	UniRef90_A0A316S9I2	356.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0286726_65	1243664.CAVL020000020_gene3198	207.0	0	RecT family	N/A
Pfam	UHGV-0286726_65	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0286726_65	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0286726_65	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0286726_65	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_66	phrog_434	321.9	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0286726_66	UniRef90_A0A1Q6R5A9	441.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0286726_66	1111454.HMPREF1250_0282	251.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-0286726_66	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0286726_66	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0286726_66	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0286726_66	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0286726_69	UniRef90_A0A1Q6R526	81.6	3.09e-18	LysM domain-containing protein	N/A
Pfam	UHGV-0286726_69	PF01476	N/A	N/A	LysM domain	LysM
structural_annotation	UHGV-0286726_69	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0286726_70	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0286726_72	phrog_15968	50.0	0.000000000000051	anti-repressor	transcription regulation
UniRef90	UHGV-0286726_72	UniRef90_A0A8H2N109	53.5	0.0000000113	P1-type antirepressor	N/A
eggNOG-mapper	UHGV-0286726_72	1345695.CLSA_c09180	59.3	0.000000000322	Phage antirepressor protein	N/A
Pfam	UHGV-0286726_72	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0286726_72	COG3617	N/A	N/A	Prophage antirepressor	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0286726	Yes	40,591	46	62	1