vOTU vOTU-148530

vOTU: vOTU-148530

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-148530
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii
Taxonomy (UHGV)	vFAM-00052 → vSUBFAM-05200 → vGENUS-10694 → vOTU-148530
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0153379
Biosample ID	SAMN05971677
Genome length (bp)	27,323 bps
CheckV completeness	63.68% (Medium-quality)
CDS count	36
CDS density	91.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii	Total connections	81	Host agreement	81.48
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0153379_2	phrog_8538	136.0	1.6e-40	N/A	unknown function
eggNOG-mapper	UHGV-0153379_2	1121121.KB894312_gene3170	102.0	2.23e-26	N/A	N/A
PHROG	UHGV-0153379_4	phrog_11237	99.8	2.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0153379_4	1235798.C817_04578	152.0	1.4013e-45	N/A	N/A
KOfam	UHGV-0153379_5	K07451	57.8	2.7e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0153379_5	phrog_119	90.1	2.9e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153379_5	UniRef90_UPI001A9A9B7F	222.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0153379_5	1158614.I592_00616	133.0	4.33e-39	HNH nucleases	N/A
Pfam	UHGV-0153379_5	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0153379_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0153379_5	PF05766,NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_6	phrog_1315	62.7	4.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0153379_6	1178540.BA70_20040	52.4	0.000000213	N/A	N/A
KOfam	UHGV-0153379_7	K18830	62.5	8.9e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0153379_7	phrog_1066	133.5	4.7e-40	N/A	unknown function
UniRef90	UHGV-0153379_7	UniRef90_UPI00164D1F26	332.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0153379_7	1033738.CAEP01000159_gene3305	242.0	0	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-0153379_7	retron_type_VI_hth_cluster2_1	55.5	0.0000000000000013	N/A	Retron
Pfam	UHGV-0153379_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0153379_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0153379_8	phrog_9	283.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0153379_8	UniRef90_UPI00164E7CEB	1130.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0153379_8	1334046.AYTB01000013_gene440	914.0	0	Phage Terminase	N/A
Pfam	UHGV-0153379_8	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0153379_8	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0153379_8	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0153379_8	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_9	phrog_12	132.1	3.8e-39	portal protein	head and packaging
UniRef90	UHGV-0153379_9	UniRef90_UPI00164D1BB3	763.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0153379_9	565653.EGBG_01968	455.0	0	Phage portal protein	N/A
Pfam	UHGV-0153379_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0153379_9	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0153379_9	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0153379_9	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0153379_10	K01358	144.1	1.3999e-42	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0153379_10	phrog_94	203.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0153379_10	UniRef90_UPI00164DE920	462.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0153379_10	565653.EGBG_01969	257.0	0	Clp protease	N/A
Pfam	UHGV-0153379_10	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0153379_10	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0153379_10	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_11	phrog_10	81.2	6.5e-24	major head protein	head and packaging
UniRef90	UHGV-0153379_11	UniRef90_UPI00164D68BF	772.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0153379_11	565653.EGBG_01970	551.0	0	Phage capsid family	N/A
Pfam	UHGV-0153379_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0153379_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0153379_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0153379_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_12	phrog_749	110.5	7.3e-33	N/A	unknown function
UniRef90	UHGV-0153379_12	UniRef90_UPI00164D02BB	187.0	0	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0153379_12	1139219.I569_00834	114.0	6.86e-32	N/A	N/A
structural_annotation	UHGV-0153379_12	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_13	phrog_25	49.4	0.000000000000093	head closure Hc1	connector
UniRef90	UHGV-0153379_13	UniRef90_UPI00164E6ADE	250.0	0	phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0153379_13	330396.A8ATA1_9CAUD	149.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0153379_13	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_14	phrog_5	50.3	0.000000000000067	tail completion or Neck1 protein	connector
UniRef90	UHGV-0153379_14	UniRef90_UPI00051CD700	117.0	2e-31	N/A	N/A
eggNOG-mapper	UHGV-0153379_14	1140001.I571_01749	114.0	5.3e-31	N/A	N/A
structural_annotation	UHGV-0153379_14	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_15	phrog_78	95.5	5e-28	tail terminator	connector
UniRef90	UHGV-0153379_15	UniRef90_A0A7M2AQK8	129.0	3.81e-36	N/A	N/A
eggNOG-mapper	UHGV-0153379_15	1158614.I592_00626	129.0	1.19e-36	N/A	N/A
structural_annotation	UHGV-0153379_15	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_16	phrog_88	126.2	2.4e-37	major tail protein	tail
UniRef90	UHGV-0153379_16	UniRef90_UPI00164E7143	403.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0153379_16	768486.EHR_00605	184.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0153379_16	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0153379_16	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0153379_16	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_17	phrog_187	68.5	1.1e-19	head-tail adaptor	connector
UniRef90	UHGV-0153379_17	UniRef90_A0A060AKS9	52.0	0.00000912	Tail assembly chaperone	N/A
PHROG	UHGV-0153379_18	phrog_1533	522.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0153379_18	UniRef90_UPI00164D19C5	2522.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0153379_18	411473.RUMCAL_03183	485.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0153379_18	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0153379_18	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0153379_18	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0153379_18	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_19	phrog_33	54.3	0.0000000000000033	distal tail protein Dit	tail
UniRef90	UHGV-0153379_19	UniRef90_UPI00164D63C1	483.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0153379_19	610130.Closa_0753	242.0	0	phage tail	N/A
Pfam	UHGV-0153379_19	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0153379_19	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0153379_19	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0153379_19	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_20	phrog_3558	351.7	0	tail protein	tail
UniRef90	UHGV-0153379_20	UniRef90_UPI00164D1140	1215.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0153379_20	610130.Closa_0754	552.0	0	N/A	N/A
Pfam	UHGV-0153379_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0153379_20	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0153379_20	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0153379_20	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-0153379_22	K02342	140.9	9.30042e-42	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0153379_22	phrog_192	124.7	6.1e-37	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153379_22	UniRef90_UPI0008DA85B8	159.0	2.05991e-43	3'-5' exonuclease	N/A
eggNOG-mapper	UHGV-0153379_22	1123009.AUID01000023_gene1460	111.0	2.26e-24	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity	N/A
PADLOC	UHGV-0153379_22	cd06127	109.9	3.8e-32	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0153379_22	PF00929	N/A	N/A	Exonuclease	RNase_T
NCBIFam	UHGV-0153379_22	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0153379_22	COG2176	N/A	N/A	DNA polymerase III, alpha subunit (gram-positive type)	N/A
PHROG	UHGV-0153379_23	phrog_21765	55.3	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0153379_23	1304866.K413DRAFT_1240	91.3	1.62e-20	N/A	N/A
PHROG	UHGV-0153379_24	phrog_16164	49.5	0.000000000000031	N/A	unknown function
eggNOG-mapper	UHGV-0153379_24	742733.HMPREF9469_01804	97.4	1.73e-23	N/A	N/A
PHROG	UHGV-0153379_25	phrog_38707	93.0	3.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0153379_25	478749.BRYFOR_07557	261.0	0	tail collar domain protein	N/A
COG	UHGV-0153379_25	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0153379_27	phrog_30004	53.5	5.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0153379_27	610130.Closa_0759	159.0	3.95166e-43	N/A	N/A
eggNOG-mapper	UHGV-0153379_28	742740.HMPREF9474_04291	155.0	0	N/A	N/A
structural_annotation	UHGV-0153379_29	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0153379_30	phrog_1009	47.1	0.00000000000039	N/A	unknown function
UniRef90	UHGV-0153379_30	UniRef90_A0A3E2WI44	154.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0153379_30	742740.HMPREF9474_03521	144.0	4.90454e-44	N/A	N/A
PHROG	UHGV-0153379_31	phrog_1129	65.5	6.8e-19	holin	lysis
UniRef90	UHGV-0153379_31	UniRef90_A0A2N0KEV2	143.0	6.68419e-43	Enolase	N/A
eggNOG-mapper	UHGV-0153379_31	742740.HMPREF9474_03522	138.0	1.07003e-41	N/A	N/A
Pfam	UHGV-0153379_31	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0153379_31	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0153379_32	K11062	164.3	0	entD; probable enterotoxin D	N/A
PHROG	UHGV-0153379_32	phrog_1794	166.4	0	amidase	lysis
UniRef90	UHGV-0153379_32	UniRef90_A0A6N2YCV4	492.0	0	N-acetylmuramoyl-L-alanine amidase AmiD	N/A
eggNOG-mapper	UHGV-0153379_32	1298920.KI911353_gene2668	384.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0153379_32	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0153379_32	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0153379_32	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0153379_32	PF01510,PF18342,MF_04111,NF008758,NF033202,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0153379_33	1304866.K413DRAFT_0139	63.9	0.00000000000468	N/A	N/A
eggNOG-mapper	UHGV-0153379_34	1304866.K413DRAFT_4314	212.0	0	N/A	N/A
UniRef90	UHGV-0153379_35	UniRef90_A0A413LDX4	110.0	7.21e-31	GNAT family acetyltransferase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0153379	Yes	27,323	47	64	1