vOTU vOTU-148910

vOTU: vOTU-148910

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-148910
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00393 → vOTU-148910
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0365393
Biosample ID	SAMN13509765
Genome length (bp)	36,493 bps
CheckV completeness	87.10% (Medium-quality)
CDS count	44
CDS density	93.91%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	21	Host agreement	90.48
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0365393_1	UniRef90_R6LGA5	704.0	0	SGNH_hydro domain-containing protein	N/A
structural_annotation	UHGV-0365393_1	PF16255,COG2755	N/A	N/A	N/A	N/A
COG	UHGV-0365393_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-0365393_3	K16617	42.4	0.0000000000046	COL13A; collagen type XIII alpha	N/A
Pfam	UHGV-0365393_3	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0365393_3	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0365393_4	PF18962,NF011773	N/A	N/A	N/A	N/A
UniRef90	UHGV-0365393_5	UniRef90_A0A415ZLH4	476.0	0	M23 family peptidase	N/A
eggNOG-mapper	UHGV-0365393_5	1232449.BAHV02000016_gene1805	536.0	0	N/A	N/A
Pfam	UHGV-0365393_5	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
UniRef90	UHGV-0365393_6	UniRef90_R5DCX9	189.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0365393_6	1410650.JHWL01000003_gene2815	129.0	9.84e-31	N/A	N/A
eggNOG-mapper	UHGV-0365393_8	537007.BLAHAN_05255	65.9	0.0000000122	N/A	N/A
PHROG	UHGV-0365393_9	phrog_12105	114.6	5.4e-34	N/A	unknown function
PHROG	UHGV-0365393_10	phrog_15239	44.3	0.0000000000023	N/A	unknown function
PHROG	UHGV-0365393_11	phrog_1357	238.9	0	major head protein	head and packaging
UniRef90	UHGV-0365393_11	UniRef90_A0A2V2CFL5	397.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0365393_11	1410650.JHWL01000003_gene2830	290.0	0	N/A	N/A
Pfam	UHGV-0365393_11	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0365393_11	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0365393_11	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0365393_12	phrog_13908	192.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0365393_12	1410650.JHWL01000003_gene2831	126.0	2.35e-31	N/A	N/A
PHROG	UHGV-0365393_13	phrog_156	300.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0365393_13	1410650.JHWL01000003_gene2833	528.0	0	N/A	N/A
structural_annotation	UHGV-0365393_13	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0365393_14	phrog_511	209.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0365393_14	1410650.JHWL01000003_gene2827	323.0	0	N/A	N/A
structural_annotation	UHGV-0365393_14	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0365393_15	K06909	133.8	1.7e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0365393_15	phrog_2	124.3	1.6e-36	terminase large subunit	head and packaging
UniRef90	UHGV-0365393_15	UniRef90_A0A810Q5R0	612.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0365393_15	1410650.JHWL01000003_gene2834	575.0	0	N/A	N/A
Pfam	UHGV-0365393_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0365393_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0365393_15	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0365393_18	phrog_3584	118.6	4.3e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0365393_18	537013.CLOSTMETH_02141	78.2	0.00000000000000552	N/A	N/A
structural_annotation	UHGV-0365393_18	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0365393_19	665956.HMPREF1032_03087	56.2	0.00000000835	N/A	N/A
structural_annotation	UHGV-0365393_20	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-0365393_23	phrog_190	102.5	4e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0365393_23	UniRef90_UPI0006C2AC63	125.0	7.05e-34	N/A	N/A
eggNOG-mapper	UHGV-0365393_23	693746.OBV_25250	117.0	2.64e-31	N/A	N/A
Pfam	UHGV-0365393_23	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0365393_23	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0365393_24	phrog_31029	59.4	4.9e-17	N/A	unknown function
PHROG	UHGV-0365393_26	phrog_3136	121.1	4.6e-36	N/A	unknown function
UniRef90	UHGV-0365393_26	UniRef90_A0A3D0HBD2	125.0	8.39e-33	ASCH domain-containing protein	N/A
COG	UHGV-0365393_26	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0365393_26	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0365393_27	K00390	99.2	4.6e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0365393_27	phrog_424	112.9	2.7e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0365393_27	UniRef90_UPI001D087498	403.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0365393_27	1408437.JNJN01000032_gene2312	319.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0365393_27	BrxP_00001	70.7	3e-21	BrxP	BREX
Pfam	UHGV-0365393_27	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0365393_27	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0365393_27	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0365393_31	PF05082	N/A	N/A	N/A	N/A
UniRef90	UHGV-0365393_33	UniRef90_A0A098GES5	102.0	2.31e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-0365393_33	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0365393_36	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0365393_40	K22300	50.6	0.000000000000041	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0365393_40	phrog_8	43.5	0.0000000000065	transcriptional regulator	transcription regulation
UniRef90	UHGV-0365393_40	UniRef90_A0A1Y4L0A2	109.0	1.79e-28	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0365393_40	411471.SUBVAR_05818	99.0	4.53e-25	sequence-specific DNA binding	N/A
Pfam	UHGV-0365393_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0365393_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0365393_40	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0365393_42	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0365393_43	K14059	133.0	4e-39	int; integrase	N/A
PHROG	UHGV-0365393_43	phrog_1	145.1	5.60519e-43	integrase	integration and excision
UniRef90	UHGV-0365393_43	UniRef90_A0A2Z4QB94	313.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0365393_43	641112.ACOK01000111_gene1860	112.0	3.02e-25	Phage integrase family	N/A
Pfam	UHGV-0365393_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0365393_43	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0365393_43	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0365393_44	K07497	74.3	2.5e-21	K07497; putative transposase	N/A
PHROG	UHGV-0365393_44	phrog_157	126.3	2.4e-37	transposase	integration and excision
UniRef90	UHGV-0365393_44	UniRef90_UPI000951AD79	189.0	0	integrase core domain-containing protein	N/A
eggNOG-mapper	UHGV-0365393_44	1235797.C816_00494	126.0	4.97e-33	HTH-like domain	N/A
Pfam	UHGV-0365393_44	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-0365393_44	PF13683	N/A	N/A	Integrase core domain	rve_3
COG	UHGV-0365393_44	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0365393_44	PF00665,PF13333,NF006918,COG2801	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0365393	Yes	36,493	58	87	1