vOTU vOTU-149118

vOTU: vOTU-149118

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-149118
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00411 → vOTU-149118
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0180104
Biosample ID	SAMN09781769
Genome length (bp)	24,896 bps
CheckV completeness	59.00% (Medium-quality)
CDS count	48
CDS density	93.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	136	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0180104_1	phrog_4433	245.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0180104_1	767434.Fraau_1460	99.4	2.23e-22	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0180104_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0180104_2	PF14634	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180104_6	PF10548	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180104_7	1235835.C814_03153	74.7	5.02e-17	N/A	N/A
structural_annotation	UHGV-0180104_7	PF09035,NF040990	N/A	N/A	N/A	N/A
KOfam	UHGV-0180104_8	K22300	45.4	0.0000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0180104_8	phrog_8	42.5	0.000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0180104_8	UniRef90_A0A810PZI0	87.8	1.41e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0180104_8	1122143.AUEG01000004_gene1250	51.6	0.000000214	Helix-turn-helix domain	N/A
Pfam	UHGV-0180104_8	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0180104_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0180104_8	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0180104_10	K22300	42.5	0.000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0180104_10	phrog_8	46.8	0.00000000000072	transcriptional regulator	transcription regulation
UniRef90	UHGV-0180104_10	UniRef90_A0A810Q1T1	107.0	1.15e-27	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0180104_10	585506.HMPREF0877_1786	56.6	0.0000000282	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0180104_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0180104_10	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0180104_10	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180104_11	476272.RUMHYD_03309	52.0	0.000000464	N/A	N/A
structural_annotation	UHGV-0180104_11	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_15	phrog_5319	54.0	0.0000000000000019	outer membrane protein	other
eggNOG-mapper	UHGV-0180104_15	1158601.I585_00731	70.5	0.0000000000065	N/A	N/A
Pfam	UHGV-0180104_15	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-0180104_15	PF03843,MF_01959,TIGR00752,NF041910,COG3390	N/A	N/A	N/A	N/A
Pfam	UHGV-0180104_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0180104_17	PF12844	N/A	N/A	N/A	N/A
KOfam	UHGV-0180104_18	K14059	128.6	9.1e-38	int; integrase	N/A
PHROG	UHGV-0180104_18	phrog_1	148.9	4.34403e-44	integrase	integration and excision
UniRef90	UHGV-0180104_18	UniRef90_A0A810Q0Y2	412.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0180104_18	693746.OBV_43340	361.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0180104_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0180104_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0180104_18	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180104_19	1226322.HMPREF1545_00079	107.0	1.27e-28	N/A	N/A
PHROG	UHGV-0180104_20	phrog_28802	40.8	0.000000000014	N/A	unknown function
structural_annotation	UHGV-0180104_20	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_21	phrog_20016	178.9	0	N/A	unknown function
UniRef90	UHGV-0180104_21	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0180104_21	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-0180104_21	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_22	phrog_16490	141.8	6.69821e-43	N/A	unknown function
eggNOG-mapper	UHGV-0180104_22	1408437.JNJN01000043_gene803	164.0	0	N/A	N/A
PHROG	UHGV-0180104_23	phrog_22984	72.1	7.1e-21	N/A	unknown function
PHROG	UHGV-0180104_24	phrog_21718	110.9	1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0180104_24	397290.C810_05210	72.4	0.0000000000000736	N/A	N/A
PHROG	UHGV-0180104_25	phrog_3754	101.7	6.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0180104_25	1226322.HMPREF1545_00073	166.0	0	N/A	N/A
structural_annotation	UHGV-0180104_26	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180104_27	UniRef90_UPI00164EA432	224.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180104_27	525254.HMPREF0072_1273	207.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0180104_27	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0180104_27	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_28	phrog_13256	63.0	2.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0180104_28	1226322.HMPREF1545_00166	67.4	0.0000000000000797	N/A	N/A
Pfam	UHGV-0180104_31	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0180104_31	PF07484	N/A	N/A	N/A	N/A
Pfam	UHGV-0180104_32	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0180104_32	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_33	phrog_18725	101.3	9.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0180104_33	693746.OBV_18220	135.0	2.82e-38	N/A	N/A
structural_annotation	UHGV-0180104_34	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_36	phrog_35892	56.8	2.3e-22	N/A	unknown function
UniRef90	UHGV-0180104_36	UniRef90_A0A843FMD8	174.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-0180104_36	471875.RUMLAC_02240	135.0	1.54e-32	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-0180104_36	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0180104_36	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180104_36	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180104_37	411471.SUBVAR_06929	305.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0180104_37	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0180104_39	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_40	phrog_13879	216.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0180104_40	693746.OBV_18210	392.0	0	N/A	N/A
structural_annotation	UHGV-0180104_40	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_41	phrog_1194	74.9	1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0180104_41	411902.CLOBOL_00125	119.0	4.79e-33	N/A	N/A
structural_annotation	UHGV-0180104_41	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_42	phrog_1535	111.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0180104_42	UniRef90_A0A810PX76	235.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0180104_42	1235797.C816_04182	399.0	0	SLT domain	N/A
COG	UHGV-0180104_42	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180104_42	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_43	phrog_706	119.5	2.6e-35	N/A	unknown function
UniRef90	UHGV-0180104_43	UniRef90_A0A2U1BEN4	210.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0180104_43	693746.OBV_18170	199.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0180104_43	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0180104_43	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_44	phrog_11299	65.9	7.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0180104_44	693746.OBV_18160	129.0	1.01e-36	N/A	N/A
structural_annotation	UHGV-0180104_44	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_45	phrog_3099	87.0	2.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0180104_45	693746.OBV_18150	231.0	0	N/A	N/A
structural_annotation	UHGV-0180104_45	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_46	phrog_3266	50.4	0.000000000000034	tail completion	connector
eggNOG-mapper	UHGV-0180104_46	1232443.BAIA02000078_gene24	173.0	0	N/A	N/A
structural_annotation	UHGV-0180104_46	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0180104_47	phrog_556	75.2	7.8e-22	minor head protein	head and packaging
UniRef90	UHGV-0180104_47	UniRef90_UPI00195E1497	214.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0180104_47	1226322.HMPREF1545_00054	162.0	0	Minor capsid protein	N/A
Pfam	UHGV-0180104_47	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0180104_47	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180104_48	642492.Clole_0823	49.3	0.000000555	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0180104	Yes	24,896	53	59	1