vOTU vOTU-150418

vOTU: vOTU-150418

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-150418
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → 14-2 → 14-2 sp012519695
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01365 → vGENUS-18569 → vOTU-150418
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → 14-2 → 14-2 sp012519695
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0004616
Biosample ID	SAMEA4765588
Genome length (bp)	22,942 bps
CheckV completeness	59.76% (Medium-quality)
CDS count	36
CDS density	95.18%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → 14-2 → 14-2 sp012519695	Total connections	15	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → 14-2 → 14-2 sp012519695	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0004616_2	phrog_8684	79.8	1.8e-23	N/A	unknown function
UniRef90	UHGV-0004616_2	UniRef90_UPI000E4794A6	186.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0004616_2	1458852.A0A059T7V5_9CAUD	74.7	0.00000000000000403	YopX protein	N/A
Pfam	UHGV-0004616_2	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0004616_2	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0004616_2	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0004616_3	UniRef90_UPI001C039694	65.9	0.0000000000133	Lar family restriction alleviation protein	N/A
PHROG	UHGV-0004616_6	phrog_36	70.4	3.2e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0004616_6	UniRef90_UPI001F14539B	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0004616_6	1235800.C819_02243	196.0	0	N/A	N/A
Pfam	UHGV-0004616_6	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0004616_6	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_8	phrog_309	207.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0004616_8	UniRef90_UPI00164CAAF8	225.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0004616_8	1232453.BAIF02000011_gene3351	209.0	0	HNH endonuclease	N/A
Pfam	UHGV-0004616_8	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0004616_8	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0004616_8	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0004616_9	K06909	91.9	8.8e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0004616_9	phrog_10250	48.4	0.00000000000002	N/A	unknown function
UniRef90	UHGV-0004616_9	UniRef90_UPI00164A3891	924.0	0	terminase	N/A
eggNOG-mapper	UHGV-0004616_9	394503.Ccel_3050	661.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0004616_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0004616_9	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_10	phrog_533	288.1	0	portal protein	head and packaging
UniRef90	UHGV-0004616_10	UniRef90_UPI001F14233C	862.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0004616_10	742740.HMPREF9474_03501	533.0	0	N/A	N/A
structural_annotation	UHGV-0004616_10	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_11	phrog_25639	102.5	1.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0004616_11	483218.BACPEC_01160	70.9	0.00000000000000139	N/A	N/A
PHROG	UHGV-0004616_12	phrog_581	252.5	0	minor head protein	head and packaging
UniRef90	UHGV-0004616_12	UniRef90_A0A1C5RQF5	444.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0004616_12	33035.JPJF01000093_gene2255	435.0	0	N/A	N/A
Pfam	UHGV-0004616_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0004616_12	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
eggNOG-mapper	UHGV-0004616_13	1095750.HMPREF9970_0104	57.8	0.000000000241	N/A	N/A
PHROG	UHGV-0004616_15	phrog_2303	139.7	2.09999e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0004616_15	1304866.K413DRAFT_0806	176.0	0	N/A	N/A
PHROG	UHGV-0004616_16	phrog_422	343.8	0	major head protein	head and packaging
UniRef90	UHGV-0004616_16	UniRef90_R5RH87	503.0	0	Putative phage major capsid protein	N/A
eggNOG-mapper	UHGV-0004616_16	33035.JPJF01000093_gene2252	516.0	0	N/A	N/A
structural_annotation	UHGV-0004616_16	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_17	phrog_1378	67.5	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0004616_17	1280692.AUJL01000027_gene2159	70.5	0.0000000000000127	N/A	N/A
PHROG	UHGV-0004616_18	phrog_541	86.6	2.4e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0004616_18	33035.JPJF01000093_gene2250	171.0	0	N/A	N/A
PHROG	UHGV-0004616_19	phrog_8710	140.8	3.50044e-42	N/A	unknown function
eggNOG-mapper	UHGV-0004616_19	742740.HMPREF9474_03508	147.0	2.10195e-44	N/A	N/A
structural_annotation	UHGV-0004616_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_20	phrog_556	53.4	0.0000000000000044	minor head protein	head and packaging
eggNOG-mapper	UHGV-0004616_20	742740.HMPREF9474_03509	162.0	0	N/A	N/A
PHROG	UHGV-0004616_21	phrog_2595	75.4	6.9e-22	head-tail connector protein	connector
UniRef90	UHGV-0004616_21	UniRef90_UPI00164BAA81	221.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0004616_21	1282664.H354_06686	112.0	6.45e-30	N/A	N/A
Pfam	UHGV-0004616_21	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0004616_21	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_22	phrog_820	111.5	4.4e-33	major tail protein	tail
eggNOG-mapper	UHGV-0004616_22	33035.JPJF01000093_gene2246	233.0	0	N/A	N/A
structural_annotation	UHGV-0004616_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_23	phrog_8300	91.3	7.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0004616_23	33035.JPJF01000093_gene2245	94.4	5.69e-24	N/A	N/A
structural_annotation	UHGV-0004616_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_24	phrog_8355	118.3	1.4e-35	N/A	unknown function
UniRef90	UHGV-0004616_24	UniRef90_UPI001F1300CC	168.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0004616_24	742740.HMPREF9474_03513	114.0	1.72e-31	N/A	N/A
Pfam	UHGV-0004616_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0004616_24	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_25	phrog_1535	298.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0004616_25	UniRef90_A0A1C5PIN9	890.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0004616_25	33035.JPJF01000093_gene2243	519.0	0	phage tail tape measure protein	N/A
COG	UHGV-0004616_25	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0004616_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_26	phrog_1194	69.4	4.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0004616_26	33035.JPJF01000093_gene2242	169.0	0	N/A	N/A
structural_annotation	UHGV-0004616_26	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0004616_27	phrog_6616	558.1	0	tail protein	tail
UniRef90	UHGV-0004616_27	UniRef90_A0A0J1FXD9	501.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0004616_27	476272.RUMHYD_01992	320.0	0	N/A	N/A
structural_annotation	UHGV-0004616_27	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0004616_28	476272.RUMHYD_01994	73.2	0.00000000000227	N/A	N/A
eggNOG-mapper	UHGV-0004616_29	1235793.C809_01933	70.9	0.0000000000332	COG COG5295 Autotransporter adhesin	N/A
structural_annotation	UHGV-0004616_30	PF10618,MF_01370	N/A	N/A	N/A	N/A
UniRef90	UHGV-0004616_31	UniRef90_A0A011UAK9	53.1	0.0000000252	Antitoxin	N/A
PHROG	UHGV-0004616_32	phrog_199	62.2	6.4e-18	holin	lysis
UniRef90	UHGV-0004616_32	UniRef90_C7GBZ0	242.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0004616_32	428126.CLOSPI_02191	124.0	4.72e-34	Bacteriophage holin family	N/A
Pfam	UHGV-0004616_32	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0004616_32	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0004616_32	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0004616_33	K01185	133.6	2.2e-39	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0004616_33	phrog_7	163.0	0	endolysin	lysis
UniRef90	UHGV-0004616_33	UniRef90_A0A843GVL0	179.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0004616_33	397291.C804_01109	172.0	0	Phage lysozyme	N/A
Pfam	UHGV-0004616_33	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-0004616_33	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
HAMAP	UHGV-0004616_33	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0004616_33	PF00959,MF_04110,COG3772	N/A	N/A	N/A	N/A
KOfam	UHGV-0004616_35	K07729	63.7	4e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0004616_35	phrog_3	45.4	0.0000000000029	transcriptional repressor	transcription regulation
UniRef90	UHGV-0004616_35	UniRef90_UPI000F63962A	56.2	0.0000000212	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0004616_35	867903.ThesuDRAFT_02093	65.9	0.0000000000463	binding domain	N/A
Pfam	UHGV-0004616_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0004616_35	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
Pfam	UHGV-0004616_36	PF13413	N/A	N/A	Helix-turn-helix domain	HTH_25

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0004616	Yes	22,942	39	60	1