vOTU vOTU-150850

vOTU: vOTU-150850

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-150850
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vOTU-150850
Host lineage	Bacteria → Firmicutes → Bacilli → RFN20 → CAG-826 → RUG131 → RUG131 sp900549975
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0025915
Biosample ID	N/A
Genome length (bp)	43,605 bps
CheckV completeness	66.54% (Medium-quality)
CDS count	60
CDS density	89.07%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RFN20 → CAG-826 → RUG131 → RUG131 sp900549975	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0025915_1	phrog_83	61.9	1e-17	terminase small subunit	head and packaging
Pfam	UHGV-0025915_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0025915_1	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0025915_2	K07451	42.5	0.000000000011	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0025915_2	phrog_144	73.7	2.9e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025915_2	UniRef90_A0A2N1SDX9	92.4	4.34e-22	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0025915_2	1280681.AUJZ01000037_gene2539	61.2	0.000000000129	HNH endonuclease	N/A
Pfam	UHGV-0025915_2	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0025915_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0025915_3	phrog_9	284.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0025915_3	UniRef90_A0A4V0Y190	441.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0025915_3	1501230.ET33_02280	436.0	0	Terminase	N/A
Pfam	UHGV-0025915_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0025915_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0025915_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0025915_3	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_4	phrog_12	233.1	0	portal protein	head and packaging
UniRef90	UHGV-0025915_4	UniRef90_A0A3D4EI33	170.0	1.54143e-44	Phage portal protein	N/A
eggNOG-mapper	UHGV-0025915_4	1234679.BN424_3292	148.0	3.5e-37	Phage portal protein	N/A
Pfam	UHGV-0025915_4	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0025915_4	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0025915_4	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0025915_4	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0025915_5	K01358	157.8	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0025915_5	phrog_94	239.9	0	head maturation protease	head and packaging
UniRef90	UHGV-0025915_5	UniRef90_A0A8G0MSM8	184.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0025915_5	447909.A6M950_9VIRU	164.0	0	serine-type endopeptidase activity	N/A
Pfam	UHGV-0025915_5	PF00574	N/A	N/A	Clp protease	CLP_protease
structural_annotation	UHGV-0025915_5	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_6	phrog_10	140.1	1.99993e-41	major head protein	head and packaging
UniRef90	UHGV-0025915_6	UniRef90_UPI0018736BFC	234.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0025915_6	1007096.BAGW01000012_gene2378	217.0	0	Phage capsid family	N/A
Pfam	UHGV-0025915_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0025915_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0025915_6	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0025915_6	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-0025915_8	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
PHROG	UHGV-0025915_13	phrog_8462	46.7	0.00000000000028	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0025915_13	1278311.AUAL01000001_gene20	69.3	0.00000000173	phage tail tape measure protein	N/A
COG	UHGV-0025915_13	COG4372	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025915_13	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025915_14	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_15	phrog_7064	54.5	1.8e-17	tail protein	tail
structural_annotation	UHGV-0025915_15	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025915_18	679935.Alfi_0761	50.4	0.000000418	N/A	N/A
PHROG	UHGV-0025915_19	phrog_608	51.1	0.00000000000002	holin	lysis
Pfam	UHGV-0025915_19	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0025915_19	PF09682	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_22	phrog_21718	53.0	0.0000000000000054	N/A	unknown function
eggNOG-mapper	UHGV-0025915_22	1235790.C805_00058	55.8	0.000000157	N/A	N/A
eggNOG-mapper	UHGV-0025915_24	641112.ACOK01000103_gene525	78.6	0.00000000000000371	N/A	N/A
structural_annotation	UHGV-0025915_25	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025915_27	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_28	phrog_93	42.6	0.000000000007	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025915_28	UniRef90_A0A1V6B667	90.9	1.8e-21	VRR-NUC domain protein	N/A
structural_annotation	UHGV-0025915_28	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0025915_30	K19789	189.3	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0025915_30	phrog_16	253.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025915_30	UniRef90_A0A2I7QZ94	218.0	0	P-loop containing nucleoside triphosphate hydrolase	N/A
eggNOG-mapper	UHGV-0025915_30	936140.AEOT01000014_gene1331	252.0	0	Helicase C-terminal domain protein	N/A
PADLOC	UHGV-0025915_30	mREase_IV_00004	64.0	2.1e-18	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0025915_30	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0025915_30	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
NCBIFam	UHGV-0025915_30	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-0025915_30	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
KOfam	UHGV-0025915_31	K00558	127.4	6.3e-38	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0025915_31	phrog_116	141.3	8.82818e-44	DNA methyltransferase	other
UniRef90	UHGV-0025915_31	UniRef90_UPI00189DA00C	305.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0025915_31	397290.C810_05213	208.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0025915_31	MTase_II_00174	140.8	0	Type II methyltransferase	RM
Pfam	UHGV-0025915_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0025915_31	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0025915_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0025915_31	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0025915_32	K00390	67.5	2.5e-20	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0025915_32	phrog_424	111.6	6.5e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0025915_32	UniRef90_A0A843GZV6	369.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0025915_32	1410650.JHWL01000037_gene595	317.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0025915_32	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0025915_32	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0025915_32	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_38	phrog_3136	42.2	1.1e-22	N/A	unknown function
COG	UHGV-0025915_38	COG1390	N/A	N/A	Archaeal/vacuolar-type H+-ATPase subunit E/Vma4	N/A
UniRef90	UHGV-0025915_41	UniRef90_UPI000409AB6B	48.5	0.00000368	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0025915_44	411470.RUMGNA_02203	50.4	0.00000444	N/A	N/A
KOfam	UHGV-0025915_47	K06919	64.5	1.2e-18	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0025915_47	phrog_1829	643.6	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025915_47	UniRef90_UPI0005B2D030	516.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-0025915_47	1347392.CCEZ01000005_gene1217	516.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0025915_47	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0025915_47	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0025915_47	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0025915_47	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0025915_47	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
KOfam	UHGV-0025915_48	K00571	154.9	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0025915_48	phrog_67	130.1	4.9e-40	DNA methyltransferase	other
UniRef90	UHGV-0025915_48	UniRef90_UPI000CA0EC89	261.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0025915_48	469596.HMPREF9488_00879	186.0	0	DNA methylase	N/A
PADLOC	UHGV-0025915_48	MTase_II_00157	139.6	3.9937e-43	Type II methyltransferase	RM
Pfam	UHGV-0025915_48	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0025915_48	COG2189	N/A	N/A	Adenine specific DNA methylase Mod	N/A
structural_annotation	UHGV-0025915_48	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_49	phrog_21613	80.6	1.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0025915_49	1120998.AUFC01000030_gene2214	101.0	5.97e-25	N/A	N/A
PHROG	UHGV-0025915_51	phrog_1227	233.7	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025915_51	UniRef90_H1LSB9	248.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025915_51	861454.HMPREF9099_00347	248.0	0	N/A	N/A
Pfam	UHGV-0025915_51	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0025915_51	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0025915_51	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0025915_52	phrog_1499	267.6	0	N/A	unknown function
UniRef90	UHGV-0025915_52	UniRef90_A0A1C6FNE5	486.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0025915_52	1120998.AUFC01000030_gene2215	481.0	0	DNA recombination	N/A
COG	UHGV-0025915_52	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0025915_52	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
KOfam	UHGV-0025915_54	K03111	121.9	8.3e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0025915_54	phrog_44	128.1	6.3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025915_54	UniRef90_R7FPD1	133.0	2.68e-37	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0025915_54	1123313.ATUT01000010_gene1556	117.0	2.66e-31	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0025915_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0025915_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0025915_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0025915_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0025915_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0025915	Yes	43,605	29	67	1