vOTU vOTU-150955

vOTU: vOTU-150955

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-150955
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900552475
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02517 → vGENUS-04132 → vOTU-150955
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900552475
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0031849
Biosample ID	SAMEA4765689
Genome length (bp)	20,149 bps
CheckV completeness	57.22% (Medium-quality)
CDS count	26
CDS density	94.89%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900552475	Total connections	13	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900552475	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0031849_1	phrog_104	263.3	0	portal protein	head and packaging
UniRef90	UHGV-0031849_1	UniRef90_A0A1C5Y923	552.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0031849_1	665950.HMPREF1025_02537	539.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0031849_1	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_2	phrog_2494	225.8	0	minor head protein	head and packaging
UniRef90	UHGV-0031849_2	UniRef90_UPI001F3BD4CE	202.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0031849_2	908337.HMPREF9257_0543	183.0	0	N/A	N/A
PHROG	UHGV-0031849_4	phrog_17688	300.1	0	N/A	unknown function
UniRef90	UHGV-0031849_4	UniRef90_UPI001960D3D4	620.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0031849_4	936375.HMPREF1152_0677	607.0	0	phage terminase, large subunit	N/A
COG	UHGV-0031849_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0031849_4	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_5	phrog_233	88.2	1e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0031849_5	UniRef90_UPI00093990C5	122.0	2.04e-32	N/A	N/A
eggNOG-mapper	UHGV-0031849_5	706433.HMPREF9430_01266	116.0	4.57e-31	N/A	N/A
Pfam	UHGV-0031849_5	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0031849_5	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_6	phrog_10	132.0	5.4e-39	major head protein	head and packaging
UniRef90	UHGV-0031849_6	UniRef90_A0A564SB39	452.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0031849_6	1321784.HMPREF1987_01073	352.0	0	Phage capsid family	N/A
Pfam	UHGV-0031849_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0031849_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0031849_6	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_7	phrog_137	106.8	1.1e-31	head-tail adaptor Ad1	connector
UniRef90	UHGV-0031849_7	UniRef90_U2JT38	171.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-0031849_7	1321784.HMPREF1987_01075	171.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0031849_7	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0031849_7	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_8	phrog_501	93.7	1.4e-27	head closure Hc1	connector
UniRef90	UHGV-0031849_8	UniRef90_A0A0R1K4H9	140.0	3.17997e-41	N/A	N/A
eggNOG-mapper	UHGV-0031849_8	1231377.C426_1734	141.0	2.64986e-42	N/A	N/A
PHROG	UHGV-0031849_9	phrog_387	53.2	0.0000000000000047	neck protein	connector
eggNOG-mapper	UHGV-0031849_9	936375.HMPREF1152_0683	53.1	0.0000000291	N/A	N/A
PHROG	UHGV-0031849_10	phrog_123	49.3	0.000000000000083	tail terminator	connector
eggNOG-mapper	UHGV-0031849_10	1280698.AUJS01000007_gene1043	123.0	3.8e-35	N/A	N/A
structural_annotation	UHGV-0031849_10	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_11	phrog_117	166.6	0	major tail protein	tail
UniRef90	UHGV-0031849_11	UniRef90_UPI00166E02FE	240.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0031849_11	1121864.OMO_02158	235.0	0	domain, Protein	N/A
COG	UHGV-0031849_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031849_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_12	phrog_1526	70.3	2.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0031849_12	879308.HMPREF9130_1240	63.5	0.00000000000517	N/A	N/A
PHROG	UHGV-0031849_13	phrog_1633	138.8	1.70006e-41	N/A	unknown function
UniRef90	UHGV-0031849_13	UniRef90_UPI0015CCAF51	132.0	1.24e-37	N/A	N/A
eggNOG-mapper	UHGV-0031849_13	1121864.OMO_02160	124.0	6.67e-35	N/A	N/A
Pfam	UHGV-0031849_13	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0031849_13	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_14	phrog_5493	94.8	1.7e-30	tail length tape measure protein	tail
UniRef90	UHGV-0031849_14	UniRef90_A0A4D5ZXV4	285.0	0	Putative tail protein	N/A
eggNOG-mapper	UHGV-0031849_14	1089553.Tph_c23060	234.0	0	lysine exporter protein (LysE YggA)	N/A
COG	UHGV-0031849_14	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-0031849_14	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031849_15	UniRef90_UPI001923513F	81.3	0.00000000000000397	phage tail family protein	N/A
eggNOG-mapper	UHGV-0031849_15	411490.ANACAC_00709	53.9	0.00000548	phage tail	N/A
COG	UHGV-0031849_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0031849_15	PF05709,PF11699,TIGR01633,NF009806,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_16	phrog_3558	251.1	0	tail protein	tail
UniRef90	UHGV-0031849_16	UniRef90_A8SKQ2	231.0	0	Phage minor structural protein, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0031849_16	411465.PEPMIC_00746	231.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0031849_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0031849_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0031849_16	PF06605,PF21683,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_17	phrog_372	298.7	0	tail protein	tail
UniRef90	UHGV-0031849_17	UniRef90_UPI001373A0FD	300.0	0	N/A	N/A
eggNOG-mapper	UHGV-0031849_17	1235802.C823_05263	224.0	0	N/A	N/A
Pfam	UHGV-0031849_17	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0031849_17	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0031849_17	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0031849_19	phrog_1863	67.8	9.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0031849_19	748224.HMPREF9436_01412	98.2	3.71e-26	N/A	N/A
PHROG	UHGV-0031849_20	phrog_1129	65.4	6.1e-19	holin	lysis
UniRef90	UHGV-0031849_20	UniRef90_R5D220	112.0	2.31e-30	Putative holin	N/A
eggNOG-mapper	UHGV-0031849_20	1007096.BAGW01000032_gene1582	105.0	2.14e-28	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0031849_20	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0031849_20	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0031849_21	K01447	83.5	3.3e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0031849_21	phrog_1493	161.9	0	endolysin	lysis
UniRef90	UHGV-0031849_21	UniRef90_A0A350TLR9	215.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0031849_21	553973.CLOHYLEM_07195	169.0	0	Ami_2	N/A
Pfam	UHGV-0031849_21	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0031849_21	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0031849_21	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0031849_21	PF01510,PF01471,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031849_22	UniRef90_A0A1Q9JGI6	139.0	1.54e-39	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0031849_22	1095750.HMPREF9970_2261	111.0	2.18e-29	N/A	N/A
structural_annotation	UHGV-0031849_22	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
KOfam	UHGV-0031849_26	K14059	107.5	1.5e-31	int; integrase	N/A
PHROG	UHGV-0031849_26	phrog_1	135.9	3.60001e-40	integrase	integration and excision
UniRef90	UHGV-0031849_26	UniRef90_A0A810Q0Y2	551.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0031849_26	693746.OBV_43340	414.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0031849_26	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0031849_26	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0031849_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0031849_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0031849_26	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0031849	Yes	20,149	59	57	1