vOTU vOTU-151126

vOTU: vOTU-151126

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-151126
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00146 → vGENUS-00447 → vOTU-151126
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0196263
Biosample ID	N/A
Genome length (bp)	17,671 bps
CheckV completeness	50.40% (Medium-quality)
CDS count	21
CDS density	93.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	161	Host agreement	84.47
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	343	Host agreement	90.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 50.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0196263_1	K07451	43.0	0.0000000000079	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0196263_1	phrog_119	76.7	3e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0196263_1	UniRef90_A0A0M6WIX4	221.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0196263_1	1405.DJ92_863	89.4	9.35e-22	HNH endonuclease	N/A
Pfam	UHGV-0196263_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0196263_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0196263_3	phrog_5110	97.5	8.3e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0196263_3	UniRef90_A0A1C5LZF0	108.0	2.45e-28	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0196263_3	349161.Dred_2608	77.0	5.39e-17	N/A	N/A
Pfam	UHGV-0196263_3	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0196263_3	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_4	phrog_9	254.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0196263_4	UniRef90_D4M588	1022.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0196263_4	1232452.BAIB02000007_gene1629	538.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0196263_4	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0196263_4	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0196263_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0196263_4	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_5	phrog_12	74.4	9.1e-22	portal protein	head and packaging
UniRef90	UHGV-0196263_5	UniRef90_A0A844KEF3	547.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0196263_5	1232452.BAIB02000007_gene1627	290.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0196263_5	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0196263_5	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0196263_5	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0196263_6	K01358	108.5	8.1e-32	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0196263_6	phrog_94	171.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0196263_6	UniRef90_D4M590	488.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0196263_6	1235792.C808_00085	206.0	0	Clp protease	N/A
Pfam	UHGV-0196263_6	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0196263_6	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0196263_6	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_7	phrog_10	80.6	1.4e-23	major head protein	head and packaging
UniRef90	UHGV-0196263_7	UniRef90_D4M591	672.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0196263_7	1232452.BAIB02000007_gene1625	484.0	0	Phage capsid family	N/A
Pfam	UHGV-0196263_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0196263_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0196263_7	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0196263_7	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0196263_9	UniRef90_A0A844KCF4	187.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-0196263_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0196263_10	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_11	phrog_5	56.2	9e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0196263_11	UniRef90_D4M595	168.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0196263_11	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0196263_11	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_12	phrog_88	105.8	3.5e-31	major tail protein	tail
UniRef90	UHGV-0196263_12	UniRef90_A0A1Q9J4Y1	281.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0196263_12	1487921.DP68_11355	53.1	0.00000544	phage major tail protein	N/A
NCBIFam	UHGV-0196263_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0196263_12	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0196263_12	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_14	phrog_1272	203.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0196263_14	UniRef90_A0A350VIV1	1044.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0196263_14	1035184.HMPREF1042_1328	290.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-0196263_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0196263_14	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0196263_14	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0196263_15	phrog_33	69.8	6.4e-20	distal tail protein Dit	tail
UniRef90	UHGV-0196263_15	UniRef90_A0A350VIV2	469.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0196263_15	1232452.BAIB02000007_gene1615	213.0	0	phage tail	N/A
COG	UHGV-0196263_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0196263_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_16	phrog_13289	375.7	0	tail protein	tail
UniRef90	UHGV-0196263_16	UniRef90_A0A350VIV3	952.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0196263_16	1235798.C817_02568	420.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0196263_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0196263_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0196263_16	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0196263_16	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_17	phrog_11037	141.7	5.89947e-42	N/A	unknown function
UniRef90	UHGV-0196263_17	UniRef90_A0A0M6WKQ1	286.0	0	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0196263_17	1235796.C815_01287	154.0	3.72745e-43	pathogenesis	N/A
Pfam	UHGV-0196263_17	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-0196263_17	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0196263_17	PF18013	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_18	phrog_5240	44.1	0.0000000000014	tail fiber protein	tail
eggNOG-mapper	UHGV-0196263_18	1235798.C817_04596	64.3	0.000000065	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0196263_18	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0196263_18	COG4675	N/A	N/A	Phage tail collar domain	N/A
KOfam	UHGV-0196263_19	K07273	161.5	0	acm; lysozyme	N/A
PHROG	UHGV-0196263_19	phrog_291	133.7	1.7e-39	endolysin	lysis
UniRef90	UHGV-0196263_19	UniRef90_A0A174GRH8	647.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0196263_19	397287.C807_01339	226.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0196263_19	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0196263_19	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0196263_19	PF01183,PF01471,MF_01672,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_20	phrog_199	61.5	1.1e-17	holin	lysis
UniRef90	UHGV-0196263_20	UniRef90_A0A349YRM9	236.0	0	Holin	N/A
eggNOG-mapper	UHGV-0196263_20	411470.RUMGNA_02086	185.0	0	N/A	N/A
Pfam	UHGV-0196263_20	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0196263_20	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0196263_20	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0196263_20	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0196263_21	phrog_13890	64.8	8.8e-19	N/A	unknown function
UniRef90	UHGV-0196263_21	UniRef90_A0A7X5I8W7	70.9	0.00000000000000754	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0196263_21	877414.ATWA01000049_gene449	47.4	0.00000235	N/A	N/A
Pfam	UHGV-0196263_21	PF09274	N/A	N/A	ParG	ParG

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0196263	Yes	17,671	41	50	1