vOTU vOTU-151961

vOTU: vOTU-151961

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-151961
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00096 → vOTU-151961
Host lineage	Bacteria → Firmicutes_A
Host range breadth	Phylum
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1512781
Biosample ID	SAMEA2738168
Genome length (bp)	20,139 bps
CheckV completeness	55.21% (Medium-quality)
CDS count	25
CDS density	92.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A	Total connections	4	Host agreement	50
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1512781_1	UniRef90_UPI00066157B6	166.0	0	glutaredoxin	N/A
eggNOG-mapper	UHGV-1512781_1	638301.HMPREF0444_0779	135.0	1.36e-40	Glutaredoxin-related protein	N/A
COG	UHGV-1512781_1	COG4545	N/A	N/A	Glutaredoxin-related protein	N/A
KOfam	UHGV-1512781_2	K03469	50.4	0.00000000000004	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1512781_2	phrog_531	44.0	0.0000000000014	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1512781_2	UniRef90_UPI001ABA5C38	229.0	0	ribonuclease HI family protein	N/A
eggNOG-mapper	UHGV-1512781_2	638301.HMPREF0444_0780	192.0	0	Reverse transcriptase-like	N/A
Pfam	UHGV-1512781_2	PF13456	N/A	N/A	Reverse transcriptase-like	RVT_3
COG	UHGV-1512781_2	COG0328	N/A	N/A	Ribonuclease HI	N/A
KOfam	UHGV-1512781_3	K03704	96.0	5.1e-28	cspA; cold shock protein	N/A
PHROG	UHGV-1512781_3	phrog_729	78.3	9.1e-23	cold shock protein	other
UniRef90	UHGV-1512781_3	UniRef90_UPI00158D2DEE	144.0	5.32493e-44	cold-shock protein	N/A
eggNOG-mapper	UHGV-1512781_3	638301.HMPREF0444_0781	122.0	9.27e-36	Cold shock protein domain	N/A
PADLOC	UHGV-1512781_3	retron_type_V_csd_cluster85_1	45.9	0.0000000000012	N/A	Retron
Pfam	UHGV-1512781_3	PF00313	N/A	N/A	'Cold-shock' DNA-binding domain	CSD
COG	UHGV-1512781_3	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-1512781_3	PF00313,NF007062,COG1278	N/A	N/A	N/A	N/A
UniRef90	UHGV-1512781_5	UniRef90_UPI00158EDC10	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1512781_5	638301.HMPREF0444_0783	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1512781_6	638301.HMPREF0444_0784	179.0	0	N/A	N/A
KOfam	UHGV-1512781_7	K01534	657.1	0	zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]	N/A
PHROG	UHGV-1512781_7	phrog_12316	194.3	0	ATPase	other
UniRef90	UHGV-1512781_7	UniRef90_C8NFU0	1162.0	0	Cadmium-exporting ATPase	N/A
eggNOG-mapper	UHGV-1512781_7	638301.HMPREF0444_0785	1162.0	0	E1-E2 ATPase	N/A
Pfam	UHGV-1512781_7	PF00122	N/A	N/A	E1-E2 ATPase	E1-E2_ATPase
Pfam	UHGV-1512781_7	PF00702	N/A	N/A	haloacid dehalogenase-like hydrolase	Hydrolase
NCBIFam	UHGV-1512781_7	TIGR01525.1	N/A	N/A	heavy metal translocating P-type ATPase	N/A
COG	UHGV-1512781_7	COG2217	N/A	N/A	Cation-transporting P-type ATPase	N/A
KOfam	UHGV-1512781_8	K06558	64.4	1e-18	MSR1, CD204; macrophage scavenger receptor 1	N/A
PHROG	UHGV-1512781_8	phrog_32123	746.4	0	N/A	unknown function
UniRef90	UHGV-1512781_8	UniRef90_UPI0009E45001	619.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1512781_8	997830.HMPREF1124_0614	517.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1512781_8	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1512781_8	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-1512781_8	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_9	phrog_608	57.7	9.1e-17	holin	lysis
UniRef90	UHGV-1512781_9	UniRef90_UPI00066CB494	198.0	0	phage holin, LLH family	N/A
eggNOG-mapper	UHGV-1512781_9	1336234.JAGN01000004_gene510	68.9	0.000000000000216	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1512781_9	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1512781_9	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_10	phrog_4257	100.4	1.4e-29	N/A	unknown function
UniRef90	UHGV-1512781_10	UniRef90_A0A139QI86	69.3	0.00000000000218	N/A	N/A
eggNOG-mapper	UHGV-1512781_10	1005705.HMPREF9967_1056	79.3	4.89e-17	N/A	N/A
KOfam	UHGV-1512781_12	K01447	45.3	0.0000000000014	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1512781_12	phrog_7698	177.1	0	endolysin	lysis
UniRef90	UHGV-1512781_12	UniRef90_A0A1F1SF74	351.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1512781_12	764299.STRIC_2439	315.0	0	Ami_2	N/A
Pfam	UHGV-1512781_12	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1512781_12	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1512781_12	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1512781_12	PF01510,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_13	phrog_372	340.6	0	tail protein	tail
UniRef90	UHGV-1512781_13	UniRef90_UPI00065F928E	1114.0	0	N/A	N/A
eggNOG-mapper	UHGV-1512781_13	1282664.H354_07750	419.0	0	N/A	N/A
Pfam	UHGV-1512781_13	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1512781_13	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_14	phrog_588	228.7	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-1512781_14	UniRef90_UPI0018E9B800	494.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1512781_14	1282664.H354_06721	493.0	0	outer membrane autotransporter barrel domain protein	N/A
Pfam	UHGV-1512781_14	PF01259	N/A	N/A	SAICAR synthetase	SAICAR_synt
COG	UHGV-1512781_14	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
PHROG	UHGV-1512781_15	phrog_1194	62.1	3.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1512781_15	1282664.H354_06716	129.0	3.11e-37	N/A	N/A
structural_annotation	UHGV-1512781_15	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_16	phrog_1535	563.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1512781_16	UniRef90_A0A139R8H3	778.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1512781_16	1282664.H354_06711	760.0	0	Phage-related minor tail protein	N/A
COG	UHGV-1512781_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1512781_16	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_17	phrog_8355	108.0	3e-32	N/A	unknown function
UniRef90	UHGV-1512781_17	UniRef90_UPI0009E34DBA	179.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1512781_17	1282664.H354_06706	110.0	8.01e-31	N/A	N/A
Pfam	UHGV-1512781_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1512781_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_18	phrog_8300	72.5	5.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1512781_18	1282664.H354_06701	87.4	3.39e-21	N/A	N/A
structural_annotation	UHGV-1512781_18	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_19	phrog_390	41.4	0.00000000003	Arc-like repressor	transcription regulation
PHROG	UHGV-1512781_20	phrog_820	118.9	2.8e-35	major tail protein	tail
eggNOG-mapper	UHGV-1512781_20	1282664.H354_06691	232.0	0	N/A	N/A
structural_annotation	UHGV-1512781_20	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_21	phrog_2595	80.1	2.5e-23	head-tail connector protein	connector
UniRef90	UHGV-1512781_21	UniRef90_UPI001D0627B3	121.0	6.26e-33	minor capsid protein	N/A
eggNOG-mapper	UHGV-1512781_21	1282664.H354_06686	201.0	0	N/A	N/A
Pfam	UHGV-1512781_21	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1512781_21	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_22	phrog_556	51.4	0.000000000000018	minor head protein	head and packaging
UniRef90	UHGV-1512781_22	UniRef90_UPI0018E07468	228.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1512781_22	1282664.H354_06681	174.0	0	N/A	N/A
PHROG	UHGV-1512781_23	phrog_8710	128.0	3.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-1512781_23	1282664.H354_06676	162.0	0	N/A	N/A
structural_annotation	UHGV-1512781_23	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1512781_24	phrog_541	73.3	3.3e-21	head-tail adaptor	connector
eggNOG-mapper	UHGV-1512781_24	483218.BACPEC_01153	144.0	8.00141e-43	N/A	N/A
PHROG	UHGV-1512781_25	phrog_1378	41.8	0.000000000014	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1512781	Yes	20,139	42	55	1