vOTU vOTU-152237

vOTU: vOTU-152237

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-152237
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vOTU-152237
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0170375
Biosample ID	SAMN06164691
Genome length (bp)	31,351 bps
CheckV completeness	74.29% (Medium-quality)
CDS count	55
CDS density	91.20%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	650	Host agreement	98.46
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	21	Host agreement	80.95

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0170375_2	UniRef90_UPI0018CC2891	115.0	4.33e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0170375_2	1235790.C805_00037	109.0	2.18e-28	N/A	N/A
structural_annotation	UHGV-0170375_2	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-0170375_3	K06909	144.6	9.20653e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0170375_3	phrog_10250	174.9	0	N/A	unknown function
UniRef90	UHGV-0170375_3	UniRef90_A0A844D8I4	843.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0170375_3	411490.ANACAC_00783	489.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0170375_3	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0170375_3	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0170375_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0170375_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0170375_3	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_4	phrog_64	124.7	3.4e-37	portal protein	head and packaging
UniRef90	UHGV-0170375_4	UniRef90_A0A6N7TNT3	926.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0170375_4	642492.Clole_2764	83.2	0.0000000000000308	phage portal protein, SPP1	N/A
Pfam	UHGV-0170375_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0170375_4	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_5	phrog_21498	301.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0170375_5	78346.BRUM_0376	280.0	0	DNA binding	N/A
COG	UHGV-0170375_5	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0170375_5	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_6	phrog_2468	80.8	1e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0170375_6	UniRef90_A0A6N7TLR7	657.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0170375_6	1504822.CCNO01000013_gene286	108.0	3.57e-23	cell adhesion	N/A
Pfam	UHGV-0170375_6	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0170375_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0170375_6	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_8	phrog_8680	202.1	0	N/A	unknown function
UniRef90	UHGV-0170375_8	UniRef90_A0A844D688	456.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170375_8	1423790.BN53_04265	182.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0170375_8	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0170375_8	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0170375_8	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_10	phrog_5	49.8	0.00000000000009	tail completion or Neck1 protein	connector
UniRef90	UHGV-0170375_10	UniRef90_A0A6N7TNP6	290.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0170375_10	929506.CbC4_1219	90.1	5.98e-21	N/A	N/A
Pfam	UHGV-0170375_10	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0170375_10	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0170375_10	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_13	phrog_544	137.2	1.3e-40	major head protein	head and packaging
UniRef90	UHGV-0170375_13	UniRef90_R0BKA1	434.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0170375_13	476272.RUMHYD_01776	321.0	0	N/A	N/A
structural_annotation	UHGV-0170375_13	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_15	phrog_17977	44.5	0.0000000000022	N/A	unknown function
UniRef90	UHGV-0170375_15	UniRef90_A0A844DHJ8	127.0	2.12e-35	Phage head closure protein	N/A
structural_annotation	UHGV-0170375_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0170375_16	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_17	phrog_885	71.7	9.3e-21	major tail protein	tail
eggNOG-mapper	UHGV-0170375_17	1111121.HMPREF1247_0789	150.0	1.61149e-43	N/A	N/A
structural_annotation	UHGV-0170375_17	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_20	phrog_28775	133.2	1.9e-39	tail length tape measure protein	tail
UniRef90	UHGV-0170375_20	UniRef90_A0A6N7TLD3	1412.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0170375_20	411470.RUMGNA_02228	131.0	7.68e-29	tape measure	N/A
Pfam	UHGV-0170375_20	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0170375_20	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0170375_20	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0170375_20	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0170375_21	UniRef90_A0A417QGC1	117.0	1.6e-28	MtfA protein	N/A
eggNOG-mapper	UHGV-0170375_21	411490.ANACAC_00709	104.0	2.78e-24	phage tail	N/A
COG	UHGV-0170375_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0170375_21	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_22	phrog_3558	201.9	0	tail protein	tail
UniRef90	UHGV-0170375_22	UniRef90_A0A3D0XVM2	102.0	1.46e-19	Prophage_tail domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0170375_22	1035184.HMPREF1042_1326	83.2	0.0000000000000618	Prophage endopeptidase tail	N/A
Pfam	UHGV-0170375_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0170375_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0170375_22	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0170375_23	748224.HMPREF9436_01407	167.0	1.4013e-45	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0170375_25	phrog_1382	52.5	0.0000000000000041	N/A	unknown function
eggNOG-mapper	UHGV-0170375_25	411468.CLOSCI_00272	47.8	0.00000084	N/A	N/A
KOfam	UHGV-0170375_26	K07273	170.2	0	acm; lysozyme	N/A
PHROG	UHGV-0170375_26	phrog_291	143.2	2.20004e-42	endolysin	lysis
UniRef90	UHGV-0170375_26	UniRef90_E2ZES5	336.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0170375_26	748224.HMPREF9436_00154	336.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0170375_26	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0170375_26	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0170375_26	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_28	phrog_15303	116.5	1.2e-34	N/A	unknown function
Pfam	UHGV-0170375_28	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
PHROG	UHGV-0170375_30	phrog_5765	58.3	9.1e-17	N/A	unknown function
UniRef90	UHGV-0170375_30	UniRef90_UPI001D0EF465	63.5	0.00000000000258	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0170375_30	1095750.HMPREF9970_1008	56.2	0.000000000244	N/A	N/A
NCBIFam	UHGV-0170375_30	NF033495.1	N/A	N/A	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0170375_31	1384065.JAGS01000001_gene3265	48.1	0.00000491	sequence-specific DNA binding	N/A
COG	UHGV-0170375_31	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0170375_31	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_34	phrog_3754	100.0	2.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0170375_34	1235790.C805_00054	116.0	6.89e-32	N/A	N/A
PHROG	UHGV-0170375_35	phrog_21718	90.5	2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0170375_35	397290.C810_05210	80.1	8.11e-17	N/A	N/A
PHROG	UHGV-0170375_36	phrog_22984	70.4	2.6e-20	N/A	unknown function
PHROG	UHGV-0170375_37	phrog_16490	195.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0170375_37	397290.C810_01328	134.0	1.76e-34	N/A	N/A
PHROG	UHGV-0170375_38	phrog_20016	199.8	0	N/A	unknown function
UniRef90	UHGV-0170375_38	UniRef90_A0A285PT46	216.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0170375_38	1226322.HMPREF1545_00077	182.0	0	N/A	N/A
structural_annotation	UHGV-0170375_38	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0170375_39	PF12510	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0170375_41	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0170375_43	476272.RUMHYD_03602	61.6	0.000000000094	N/A	N/A
structural_annotation	UHGV-0170375_43	PF10944	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_44	phrog_422	210.8	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0170375_44	1235798.C817_02636	347.0	0	N/A	N/A
structural_annotation	UHGV-0170375_44	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0170375_45	UniRef90_A0A6N7TLZ5	278.0	0	N/A	N/A
Pfam	UHGV-0170375_45	PF14265	N/A	N/A	N/A	DUF4355
KOfam	UHGV-0170375_48	K01356	40.6	0.000000000049	lexA; repressor LexA [EC:3.4.21.88]	N/A
UniRef90	UHGV-0170375_48	UniRef90_A0A2A6ZE52	229.0	0	Peptidase_S24 domain-containing protein	N/A
Pfam	UHGV-0170375_48	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
KOfam	UHGV-0170375_52	K02315	60.8	2.4e-17	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0170375_52	phrog_50	51.5	0.000000000000004	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0170375_52	UniRef90_A0A848RG34	73.6	0.00000000000734	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0170375_52	1118057.CAGX01000020_gene1651	98.6	6.59e-22	N/A	N/A
COG	UHGV-0170375_52	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0170375_52	PF01695,MF_00377,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0170375_53	phrog_15768	50.1	0.000000000000049	N/A	unknown function
UniRef90	UHGV-0170375_53	UniRef90_A0A1C6CWP8	328.0	0	N/A	N/A
Pfam	UHGV-0170375_53	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0170375_54	phrog_4583	41.5	0.000000000018	transcriptional repressor	transcription regulation
UniRef90	UHGV-0170375_54	UniRef90_A0A1C6CXD1	161.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0170375_54	445972.ANACOL_01800	54.3	0.00000000877	N/A	N/A
Pfam	UHGV-0170375_54	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0170375_54	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0170375_54	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0170375_55	UniRef90_A0A6N7TNQ1	126.0	8.04e-37	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0170375_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0170375_55	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0170375_55	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0170375	Yes	31,351	55	74	1
UHGV-1534015	No	31,351	55	74	1
UHGV-0200964	No	31,177	55	74	1