vOTU vOTU-152244

vOTU: vOTU-152244

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-152244
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus parasanguinis_E
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vGENUS-00420 → vOTU-152244
Host lineage	Bacteria → Firmicutes → Bacilli
Host range breadth	Class
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1419840
Biosample ID	N/A
Genome length (bp)	24,088 bps
CheckV completeness	75.37% (Medium-quality)
CDS count	29
CDS density	94.89%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli	Total connections	72	Host agreement	98.61
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus parasanguinis_E	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1419840_1	phrog_6487	127.9	4.3e-38	N/A	unknown function
UniRef90	UHGV-1419840_1	UniRef90_A0A359YI00	235.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419840_1	999425.HMPREF9186_02053	132.0	6.13e-36	N/A	N/A
structural_annotation	UHGV-1419840_1	PF05587,NF040788,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_2	phrog_1309	274.8	0	endolysin	lysis
UniRef90	UHGV-1419840_2	UniRef90_A0A1F0KA16	495.0	0	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-1419840_2	1316408.HSISM1_1251	446.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1419840_2	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1419840_2	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-1419840_2	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1419840_2	PF08460,PF05257,NF041850,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_3	phrog_608	119.5	1.5e-35	holin	lysis
UniRef90	UHGV-1419840_3	UniRef90_T0TXN2	201.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1419840_3	1321372.AQQB01000060_gene79	115.0	3.76e-32	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1419840_3	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1419840_3	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1419840_4	phrog_199	48.3	0.00000000000011	holin	lysis
UniRef90	UHGV-1419840_4	UniRef90_A0A7X2X3Q0	286.0	0	Holin	N/A
eggNOG-mapper	UHGV-1419840_4	1051631.F8HGP0_9CAUD	185.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1419840_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1419840_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1419840_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_5	phrog_1554	200.4	0	N/A	unknown function
UniRef90	UHGV-1419840_5	UniRef90_A0A4V0EM35	347.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419840_5	1005705.HMPREF9967_1055	170.0	0	N/A	N/A
structural_annotation	UHGV-1419840_5	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_7	phrog_2189	470.9	0	tail protein	tail
UniRef90	UHGV-1419840_7	UniRef90_T0U481	1774.0	0	Phage endopeptidase	N/A
eggNOG-mapper	UHGV-1419840_7	1316408.HSISM1_1246	1774.0	0	Phage minor structural protein	N/A
NCBIFam	UHGV-1419840_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1419840_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419840_7	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_8	phrog_33	43.0	0.0000000000095	distal tail protein Dit	tail
UniRef90	UHGV-1419840_8	UniRef90_UPI001CC00BD7	380.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1419840_8	1316408.HSISM1_1245	468.0	0	N/A	N/A
structural_annotation	UHGV-1419840_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1419840_9	K10421	45.1	0.00000000000062	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1419840_9	phrog_5755	414.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1419840_9	UniRef90_A0A1F0KCN3	1465.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1419840_9	1316408.HSISM1_1244	1297.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-1419840_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1419840_9	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1419840_9	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1419840_9	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_10	phrog_709	131.7	2.7e-39	N/A	unknown function
UniRef90	UHGV-1419840_10	UniRef90_A0A0E4CSV4	162.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1419840_10	1316408.HSISM1_1243	235.0	0	N/A	N/A
structural_annotation	UHGV-1419840_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_11	phrog_88	151.8	2.8026e-45	major tail protein	tail
UniRef90	UHGV-1419840_11	UniRef90_T0U4F0	369.0	0	Phage major tail protein	N/A
eggNOG-mapper	UHGV-1419840_11	1316408.HSISM1_1242	369.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1419840_11	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1419840_11	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_12	phrog_78	41.6	0.000000000024	tail terminator	connector
UniRef90	UHGV-1419840_12	UniRef90_T0U477	206.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1419840_12	1316408.HSISM1_1241	206.0	0	N/A	N/A
structural_annotation	UHGV-1419840_12	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_13	phrog_5	49.7	0.0000000000001	tail completion or Neck1 protein	connector
UniRef90	UHGV-1419840_13	UniRef90_A0A414CIF4	186.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1419840_13	1316408.HSISM1_1058	156.0	0	N/A	N/A
Pfam	UHGV-1419840_13	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1419840_13	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_14	phrog_1951	119.0	1.5e-35	head-tail adaptor	connector
UniRef90	UHGV-1419840_14	UniRef90_A0A414CIH3	197.0	0	Phage head closure protein	N/A
eggNOG-mapper	UHGV-1419840_14	1316408.HSISM1_1057	197.0	0	Phage head-tail joining protein	N/A
NCBIFam	UHGV-1419840_14	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1419840_14	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1419840_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_15	phrog_2550	126.9	3.5e-38	N/A	unknown function
UniRef90	UHGV-1419840_15	UniRef90_T0U4H0	171.0	0	Orf46	N/A
eggNOG-mapper	UHGV-1419840_15	644007.C5J965_9CAUD	152.0	0	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-1419840_15	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_16	phrog_3673	59.8	3.9e-17	Arc-like repressor	transcription regulation
UniRef90	UHGV-1419840_16	UniRef90_A0A0P0N6K2	75.9	0.0000000000000011	Phage transcriptional terminator	N/A
PHROG	UHGV-1419840_17	phrog_10	192.6	0	major head protein	head and packaging
UniRef90	UHGV-1419840_17	UniRef90_A0A4D6B1V9	631.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1419840_17	1316408.HSISM1_1054	664.0	0	capsid protein	N/A
Pfam	UHGV-1419840_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1419840_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1419840_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1419840_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1419840_18	K06904	130.9	1.2e-38	N/A	N/A
PHROG	UHGV-1419840_18	phrog_80	162.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1419840_18	UniRef90_A0A414CJ71	374.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1419840_18	1316408.HSISM1_1053	375.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1419840_18	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1419840_18	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1419840_18	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1419840_18	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_19	phrog_12	190.2	0	portal protein	head and packaging
UniRef90	UHGV-1419840_19	UniRef90_A0A4D6B580	797.0	0	Portal (Connector) protein	N/A
eggNOG-mapper	UHGV-1419840_19	1316408.HSISM1_1052	800.0	0	Phage portal protein	N/A
Pfam	UHGV-1419840_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1419840_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1419840_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1419840_19	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_20	phrog_9	330.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1419840_20	UniRef90_A0A7G1JM49	1157.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1419840_20	1316408.HSISM1_1051	1182.0	0	Terminase	N/A
Pfam	UHGV-1419840_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1419840_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1419840_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1419840_20	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_21	phrog_361	144.9	2.39622e-43	terminase small subunit	head and packaging
UniRef90	UHGV-1419840_21	UniRef90_A0A414CIM9	249.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1419840_21	1316408.HSISM1_1050	249.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1419840_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1419840_21	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1419840_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_22	phrog_119	68.3	1.1e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1419840_22	UniRef90_A0A062WSH4	197.0	0	Bacteriophage nuclease	N/A
eggNOG-mapper	UHGV-1419840_22	888049.HMPREF8578_0692	197.0	0	endonuclease activity	N/A
COG	UHGV-1419840_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1419840_23	phrog_6716	107.2	6e-32	N/A	unknown function
UniRef90	UHGV-1419840_23	UniRef90_A0A1X1KI55	112.0	3.84e-30	3-dehydroquinate synthase	N/A
structural_annotation	UHGV-1419840_23	PF10694	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_24	phrog_35353	78.3	4.9e-23	N/A	unknown function
PHROG	UHGV-1419840_25	phrog_121	83.4	2.7e-24	N/A	unknown function
UniRef90	UHGV-1419840_25	UniRef90_A0A654XN93	119.0	1.54e-30	N/A	N/A
eggNOG-mapper	UHGV-1419840_25	1095737.HMPREF1110_1213	104.0	5.5e-26	N/A	N/A
Pfam	UHGV-1419840_25	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1419840_25	PF07852	N/A	N/A	N/A	N/A
KOfam	UHGV-1419840_26	K04763	101.2	1.3e-29	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1419840_26	phrog_216	185.5	0	integrase	integration and excision
UniRef90	UHGV-1419840_26	UniRef90_A0A4D6B299	349.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1419840_26	644007.C5J955_9CAUD	350.0	0	Phage integrase family	N/A
Pfam	UHGV-1419840_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1419840_26	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_27	phrog_36	65.5	1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1419840_27	UniRef90_UPI001C8C424D	233.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-1419840_27	873447.SPB_0690	91.3	8.63e-22	Transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1419840_27	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1419840_28	phrog_29132	93.9	8.3e-28	N/A	unknown function
UniRef90	UHGV-1419840_29	UniRef90_UPI00069F3546	545.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1419840_29	435842.HMPREF0848_00198	291.0	0	Pilin isopeptide linkage domain protein	N/A
Pfam	UHGV-1419840_29	PF17961	N/A	N/A	Bacterial Ig domain	Big_8
Pfam	UHGV-1419840_29	PF05737	N/A	N/A	Collagen binding domain	Collagen_bind
Pfam	UHGV-1419840_29	PF00746	N/A	N/A	LPXTG cell wall anchor motif	Gram_pos_anchor
NCBIFam	UHGV-1419840_29	TIGR01167.1	N/A	N/A	LPXTG cell wall anchor domain-containing protein	N/A
COG	UHGV-1419840_29	COG4932	N/A	N/A	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	N/A
structural_annotation	UHGV-1419840_29	PF05737,PF17961,NF000535	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1419840	Yes	24,088	40	75	1