vOTU vOTU-153083

vOTU: vOTU-153083

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-153083
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-04718 → vGENUS-08684 → vOTU-153083
Host lineage
Host range breadth
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1394272
Biosample ID	SAMEA39988168
Genome length (bp)	37,917 bps
CheckV completeness	73.62% (Medium-quality)
CDS count	66
CDS density	93.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1394272_2	UniRef90_A0A356CYS7	69.7	0.000000000000417	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1394272_2	1519439.JPJG01000014_gene78	71.6	0.000000000000151	Peptidase S24-like	N/A
Pfam	UHGV-1394272_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1394272_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1394272_2	PF01381,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394272_3	UniRef90_H1LSA5	65.5	0.00000000000157	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1394272_3	861454.HMPREF9099_00333	65.5	0.000000000000264	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1394272_3	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
structural_annotation	UHGV-1394272_3	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394272_5	UniRef90_UPI001AC3DF92	50.8	0.000000839	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1394272_5	1430331.EP10_02425	57.4	0.000000000369	N/A	N/A
structural_annotation	UHGV-1394272_5	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394272_9	PF14445	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_10	phrog_674	153.4	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1394272_10	UniRef90_A0A7X9AE52	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394272_10	1408437.JNJN01000039_gene373	189.0	0	N/A	N/A
Pfam	UHGV-1394272_10	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1394272_10	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1394272_11	K07455	173.4	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1394272_11	phrog_148	196.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394272_11	UniRef90_R6PFW1	398.0	0	Recombinase phage RecT family	N/A
eggNOG-mapper	UHGV-1394272_11	1408437.JNJN01000039_gene372	351.0	0	RecT family	N/A
Pfam	UHGV-1394272_11	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1394272_11	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1394272_11	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1394272_11	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1394272_12	K00784	41.9	0.0000000000051	rnz; ribonuclease Z [EC:3.1.26.11]	N/A
PHROG	UHGV-1394272_12	phrog_392	129.4	3.2e-38	metal-dependent hydrolase	other
UniRef90	UHGV-1394272_12	UniRef90_A0A355KXN6	329.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1394272_12	665956.HMPREF1032_03101	212.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1394272_12	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1394272_12	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1394272_12	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_13	phrog_398	193.0	0	N/A	unknown function
UniRef90	UHGV-1394272_13	UniRef90_UPI00189E6EA3	283.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1394272_13	1485543.JMME01000021_gene802	169.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-1394272_13	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1394272_13	PF16784	N/A	N/A	N/A	N/A
KOfam	UHGV-1394272_14	K03111	152.4	4.2039e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1394272_14	phrog_44	149.1	2.24208e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394272_14	UniRef90_R6UNN6	180.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1394272_14	445972.ANACOL_04434	171.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1394272_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1394272_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1394272_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1394272_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1394272_14	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_15	phrog_2113	46.6	0.00000000000042	N/A	unknown function
structural_annotation	UHGV-1394272_15	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_16	phrog_19658	121.9	1e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394272_16	UniRef90_A0A4P8I8N3	143.0	3.45e-38	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1394272_16	679937.Bcop_1259	122.0	8.63e-31	N/A	N/A
COG	UHGV-1394272_16	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1394272_16	PF04492,MF_01584,TIGR01610,TIGR02220,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_17	phrog_9804	60.5	2.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-1394272_17	903814.ELI_3550	53.9	0.000000391	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1394272_17	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
PHROG	UHGV-1394272_18	phrog_190	129.0	3e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394272_18	UniRef90_A0A416AFS0	119.0	1.08e-32	N/A	N/A
eggNOG-mapper	UHGV-1394272_18	445974.CLORAM_02947	111.0	3.17e-30	N/A	N/A
Pfam	UHGV-1394272_18	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1394272_18	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1394272_21	K00571	158.4	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1394272_21	phrog_67	210.7	0	DNA methyltransferase	other
UniRef90	UHGV-1394272_21	UniRef90_UPI001AD94F6A	414.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1394272_21	205918.Psyr_2825	329.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1394272_21	MTase_II_00173	341.2	0	Type II methyltransferase	RM
Pfam	UHGV-1394272_21	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1394272_21	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1394272_21	PF01555,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_24	phrog_24518	79.7	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-1394272_24	1519439.JPJG01000077_gene922	86.7	5.99e-19	N/A	N/A
UniRef90	UHGV-1394272_27	UniRef90_UPI00145A074D	61.6	0.0000000151	N/A	N/A
structural_annotation	UHGV-1394272_28	PF18300,MF_01549,NF008636,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_30	phrog_30343	117.2	1.1e-34	N/A	unknown function
UniRef90	UHGV-1394272_30	UniRef90_A0A415ZYR4	147.0	6.45018e-42	N-acetyltransferase	N/A
eggNOG-mapper	UHGV-1394272_30	641107.CDLVIII_1322	100.0	1.56e-24	N/A	N/A
structural_annotation	UHGV-1394272_30	PF11039,MF_02210,TIGR03585,COG1670	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_32	phrog_98	71.5	1.2e-20	N/A	unknown function
UniRef90	UHGV-1394272_32	UniRef90_UPI00189E57B4	137.0	5.32e-39	YopX family protein	N/A
eggNOG-mapper	UHGV-1394272_32	411473.RUMCAL_00280	73.2	0.000000000000016	YopX protein	N/A
Pfam	UHGV-1394272_32	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1394272_32	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1394272_32	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_34	phrog_874	169.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1394272_34	1235793.C809_02214	130.0	2.57e-34	N/A	N/A
structural_annotation	UHGV-1394272_34	PF04266,MF_00684,NF003443,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-1394272_41	K22300	50.4	0.000000000000046	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1394272_41	phrog_8	50.3	0.000000000000052	transcriptional regulator	transcription regulation
UniRef90	UHGV-1394272_41	UniRef90_A0A0R2LD59	59.3	0.00000000118	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1394272_41	1410617.JHXH01000002_gene1833	53.5	0.000000186	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1394272_41	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1394272_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1394272_41	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_42	phrog_606	53.5	0.0000000000000012	terminase small subunit	head and packaging
UniRef90	UHGV-1394272_42	UniRef90_UPI001D08D6B6	93.2	2.86e-20	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1394272_42	1280663.ATVR01000009_gene2143	52.0	0.00000826	N/A	N/A
structural_annotation	UHGV-1394272_42	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_43	phrog_3543	47.6	0.00000000000027	N/A	unknown function
UniRef90	UHGV-1394272_43	UniRef90_UPI001B161B7D	97.8	1.35e-23	N/A	N/A
eggNOG-mapper	UHGV-1394272_43	935836.JAEL01000084_gene767	100.0	1.4e-25	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein	N/A
COG	UHGV-1394272_43	COG0664	N/A	N/A	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases	N/A
structural_annotation	UHGV-1394272_43	PF12098,MF_01160,NF041095,COG1993	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394272_45	UniRef90_A0A416MW55	367.0	0	Molecular chaperone DnaJ	N/A
eggNOG-mapper	UHGV-1394272_45	500632.CLONEX_04013	338.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-1394272_45	PF00226	N/A	N/A	DnaJ domain	DnaJ
Pfam	UHGV-1394272_45	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-1394272_45	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1394272_45	PF18847	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394272_47	UniRef90_UPI001D08C4A6	72.0	0.00000000000000761	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1394272_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1394272_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1394272_47	PF20075,TIGR03070	N/A	N/A	N/A	N/A
KOfam	UHGV-1394272_48	K14060	145.4	4.30199e-43	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1394272_48	phrog_125	171.8	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394272_48	UniRef90_A0A3D0LYX8	200.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1394272_48	1408423.JHYA01000001_gene988	197.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1394272_48	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1394272_48	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1394272_48	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_49	phrog_12156	44.0	0.000000000002	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394272_49	UniRef90_A0A1M6Y7I4	505.0	0	Putative DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1394272_49	443144.GM21_1016	164.0	6.72623e-44	Putative DNA-binding domain	N/A
Pfam	UHGV-1394272_49	PF04326	N/A	N/A	Schlafen, AlbA_2	SLFN_AlbA_2
COG	UHGV-1394272_49	COG2865	N/A	N/A	Predicted transcriptional regulator, contains HTH domain	N/A
COG	UHGV-1394272_50	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
PHROG	UHGV-1394272_51	phrog_38	200.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1394272_51	UniRef90_A0A810QA10	574.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1394272_51	1298920.KI911353_gene2682	460.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1394272_51	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1394272_51	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394272_51	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_52	phrog_64	219.1	0	portal protein	head and packaging
UniRef90	UHGV-1394272_52	UniRef90_A0A414B012	497.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1394272_52	1121866.AUGK01000003_gene1429	410.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1394272_52	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1394272_52	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1394272_53	1232453.BAIF02000058_gene1626	82.0	3.77e-17	N/A	N/A
PHROG	UHGV-1394272_54	phrog_909	56.4	5.3e-16	major head protein	head and packaging
eggNOG-mapper	UHGV-1394272_54	1298920.KI911353_gene2661	64.3	0.00000000000619	N/A	N/A
PHROG	UHGV-1394272_55	phrog_29	210.1	0	major head protein	head and packaging
UniRef90	UHGV-1394272_55	UniRef90_UPI001BB87CDE	377.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1394272_55	1347368.HG964404_gene4993	308.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1394272_55	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1394272_55	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394272_57	UniRef90_A0A7C7ERG0	108.0	2.59e-28	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1394272_57	1298920.KI911353_gene2658	53.5	0.000000114	N/A	N/A
Pfam	UHGV-1394272_57	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
eggNOG-mapper	UHGV-1394272_58	1121866.AUGK01000003_gene1432	76.3	4.48e-16	N/A	N/A
PHROG	UHGV-1394272_59	phrog_5	43.3	0.0000000000068	tail completion or Neck1 protein	connector
UniRef90	UHGV-1394272_59	UniRef90_UPI001BBD4500	148.0	1.48958e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1394272_59	397290.C810_01411	111.0	1.07e-28	N/A	N/A
Pfam	UHGV-1394272_59	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1394272_59	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394272_60	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_61	phrog_158	47.9	0.00000000000025	major tail protein	tail
UniRef90	UHGV-1394272_61	UniRef90_A0A496N7C0	171.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1394272_61	1158607.UAU_01767	53.5	0.000000614	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1394272_61	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394272_62	UniRef90_A0A847YX95	136.0	1.95e-39	N/A	N/A
eggNOG-mapper	UHGV-1394272_62	469596.HMPREF9488_01311	108.0	4.04e-29	N/A	N/A
Pfam	UHGV-1394272_62	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1394272_62	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1394272_63	1121333.JMLH01000047_gene1011	87.0	3.76e-20	N/A	N/A
PHROG	UHGV-1394272_64	phrog_1535	135.7	1.49939e-43	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1394272_64	1121866.AUGK01000003_gene1437	222.0	0	phage tail tape measure protein	N/A
COG	UHGV-1394272_64	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1394272_65	phrog_1194	90.8	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-1394272_65	1158612.I580_01922	62.4	0.0000000000825	N/A	N/A
structural_annotation	UHGV-1394272_65	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1394272_66	phrog_6616	406.2	0	tail protein	tail
UniRef90	UHGV-1394272_66	UniRef90_UPI00085BC306	292.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1394272_66	476272.RUMHYD_01992	157.0	7.07e-38	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1394272	Yes	37,917	41	74	1