vOTU vOTU-153432

vOTU: vOTU-153432

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-153432
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Oribacterium → Oribacterium sp900772695
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-03406 → vGENUS-08430 → vOTU-153432
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0003070
Biosample ID	SAMEA4766187
Genome length (bp)	24,209 bps
CheckV completeness	65.06% (Medium-quality)
CDS count	38
CDS density	90.83%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	10	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Oribacterium → Oribacterium sp900772695	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0003070_1	phrog_14030	143.8	8.09951e-43	N/A	unknown function
UniRef90	UHGV-0003070_1	UniRef90_UPI001F3A7341	255.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0003070_1	411468.CLOSCI_01513	219.0	0	N/A	N/A
Pfam	UHGV-0003070_1	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-0003070_1	PF18342,NF041850,COG3807	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_4	phrog_199	81.2	1.1e-23	holin	lysis
UniRef90	UHGV-0003070_4	UniRef90_A0A416YLL7	240.0	0	Holin	N/A
eggNOG-mapper	UHGV-0003070_4	742740.HMPREF9474_04290	184.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0003070_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0003070_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0003070_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0003070_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_5	phrog_8908	42.3	0.0000000000096	N/A	unknown function
eggNOG-mapper	UHGV-0003070_6	1232452.BAIB02000007_gene1607	57.8	0.00000000627	N/A	N/A
KOfam	UHGV-0003070_7	K19721	138.2	2.89999e-41	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0003070_7	phrog_5073	121.4	0	tail fiber protein	tail
Pfam	UHGV-0003070_7	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0003070_7	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
KOfam	UHGV-0003070_8	K16628	139.2	1.49995e-41	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0003070_8	phrog_6320	94.3	8.5e-39	tail fiber protein	tail
Pfam	UHGV-0003070_8	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0003070_9	phrog_1067	302.3	0	minor head protein	head and packaging
UniRef90	UHGV-0003070_9	UniRef90_UPI000C7C59F9	436.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0003070_9	1123263.AUKY01000068_gene489	338.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0003070_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0003070_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0003070_9	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0003070_9	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_10	phrog_33	87.7	2.2e-25	distal tail protein Dit	tail
UniRef90	UHGV-0003070_10	UniRef90_A0A1C5W6B6	171.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0003070_10	1160721.RBI_I01575	130.0	2.07e-34	Phage tail protein	N/A
COG	UHGV-0003070_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0003070_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_11	phrog_6900	208.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0003070_11	UniRef90_A0A1C5Y9X6	295.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0003070_11	482234.SCAZ3_03770	317.0	0	phage tail tape measure protein	N/A
COG	UHGV-0003070_11	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0003070_11	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_12	phrog_1633	156.4	0	N/A	unknown function
UniRef90	UHGV-0003070_12	UniRef90_A0A139QHL2	131.0	5.83e-37	N/A	N/A
eggNOG-mapper	UHGV-0003070_12	585203.SMSK564_1277	126.0	1.04e-35	N/A	N/A
Pfam	UHGV-0003070_12	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0003070_12	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_13	phrog_1526	77.6	1.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0003070_13	665950.HMPREF1025_02524	69.7	0.000000000000015	N/A	N/A
PHROG	UHGV-0003070_14	phrog_117	173.8	0	major tail protein	tail
UniRef90	UHGV-0003070_14	UniRef90_A0A356C4M0	228.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0003070_14	768726.HMPREF9178_1057	211.0	0	domain, Protein	N/A
COG	UHGV-0003070_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003070_14	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_15	phrog_123	62.9	5.9e-18	tail terminator	connector
UniRef90	UHGV-0003070_15	UniRef90_F3MWA9	103.0	1.33e-26	N/A	N/A
eggNOG-mapper	UHGV-0003070_15	1280698.AUJS01000007_gene1043	106.0	1.92e-28	N/A	N/A
structural_annotation	UHGV-0003070_15	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_16	phrog_387	80.3	1.6e-23	neck protein	connector
eggNOG-mapper	UHGV-0003070_16	663952.SDD27957_07245	82.0	1.21e-19	N/A	N/A
PHROG	UHGV-0003070_17	phrog_501	72.6	5.5e-21	head closure Hc1	connector
eggNOG-mapper	UHGV-0003070_17	748224.HMPREF9436_00693	135.0	9.65e-40	N/A	N/A
structural_annotation	UHGV-0003070_17	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_18	phrog_137	51.4	0.000000000000017	head-tail adaptor Ad1	connector
UniRef90	UHGV-0003070_18	UniRef90_R6G3G4	114.0	1.4e-30	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0003070_18	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0003070_18	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_20	phrog_544	93.6	2.2e-27	major head protein	head and packaging
UniRef90	UHGV-0003070_20	UniRef90_A0A810PZM2	145.0	1.22e-37	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0003070_20	1347392.CCEZ01000005_gene1236	125.0	1.71e-31	N/A	N/A
structural_annotation	UHGV-0003070_20	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_21	phrog_1793	84.9	1.4e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-0003070_21	UniRef90_UPI001C03A2F1	131.0	5.89e-36	N/A	N/A
eggNOG-mapper	UHGV-0003070_21	1123263.AUKY01000068_gene501	122.0	5.71e-33	N/A	N/A
PHROG	UHGV-0003070_22	phrog_3675	102.0	2.8e-30	N/A	unknown function
UniRef90	UHGV-0003070_22	UniRef90_A0A1H9BUF5	118.0	2.53e-32	YjcQ protein	N/A
eggNOG-mapper	UHGV-0003070_22	665950.HMPREF1025_02533	128.0	4.32e-37	YjcQ protein	N/A
Pfam	UHGV-0003070_22	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0003070_22	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003070_23	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_24	phrog_193	120.0	2.7e-35	head maturation protease	head and packaging
UniRef90	UHGV-0003070_24	UniRef90_A0A6N8H118	223.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0003070_24	748224.HMPREF9436_01469	234.0	0	N/A	N/A
COG	UHGV-0003070_24	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-0003070_25	phrog_104	200.4	0	portal protein	head and packaging
UniRef90	UHGV-0003070_25	UniRef90_UPI0009847372	631.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0003070_25	1123263.AUKY01000112_gene2059	612.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0003070_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0003070_25	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_26	phrog_9	176.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0003070_26	UniRef90_A0A1H6UXL9	699.0	0	Phage Terminase	N/A
eggNOG-mapper	UHGV-0003070_26	1123263.AUKY01000112_gene2060	696.0	0	phage terminase, large subunit	N/A
COG	UHGV-0003070_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0003070_26	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0003070_27	UniRef90_R6GFM0	55.1	0.0000000161	Conserved domain protein	N/A
PHROG	UHGV-0003070_28	phrog_338	54.0	0.0000000000000037	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003070_28	UniRef90_A0A3E4GMG2	178.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0003070_28	1123263.AUKY01000112_gene2062	164.0	0	N/A	N/A
UniRef90	UHGV-0003070_29	UniRef90_A0A3A9FI03	81.6	5.59e-19	Chemotaxis protein	N/A
eggNOG-mapper	UHGV-0003070_29	1304866.K413DRAFT_0813	72.4	3.66e-16	N/A	N/A
PHROG	UHGV-0003070_31	phrog_11237	105.9	3.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0003070_31	1235798.C817_04578	133.0	3.43e-38	N/A	N/A
PHROG	UHGV-0003070_34	phrog_4068	54.4	0.0000000000000029	N/A	unknown function
structural_annotation	UHGV-0003070_34	PF06657	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_35	phrog_1891	216.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003070_35	UniRef90_A0A3A9EV27	149.0	5.14e-40	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0003070_35	546275.FUSPEROL_02054	134.0	4.54e-36	HNH endonuclease	N/A
Pfam	UHGV-0003070_35	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0003070_35	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-0003070_36	phrog_2044	65.3	6.9e-19	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0003070_36	1134413.ANNK01000054_gene2223	61.2	0.0000000000241	N/A	N/A
PHROG	UHGV-0003070_37	phrog_3584	167.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0003070_37	742740.HMPREF9474_04323	176.0	0	N/A	N/A
structural_annotation	UHGV-0003070_37	PF11726	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0003070	Yes	24,209	50	65	1