vOTU vOTU-153729

vOTU: vOTU-153729

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-153729
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp014297375
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00588 → vOTU-153729
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1381993
Biosample ID	SAMEA3182049
Genome length (bp)	39,488 bps
CheckV completeness	61.88% (Medium-quality)
CDS count	59
CDS density	89.86%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp014297375	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1381993_2	phrog_2310	58.4	7.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1381993_3	1089547.KB913013_gene4291	58.2	0.0000039	cellulose binding	N/A
Pfam	UHGV-1381993_3	PF19755	N/A	N/A	N/A	DUF6242
COG	UHGV-1381993_3	COG0726	N/A	N/A	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	N/A
structural_annotation	UHGV-1381993_4	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_5	phrog_10898	267.8	0	N/A	unknown function
UniRef90	UHGV-1381993_5	UniRef90_A0A7U3NJT3	191.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1381993_5	1347368.HG964403_gene4490	59.7	0.00000015	S-layer homology domain	N/A
COG	UHGV-1381993_5	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-1381993_5	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_7	phrog_19695	67.8	2.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1381993_7	476272.RUMHYD_01995	89.0	5.7e-19	N/A	N/A
eggNOG-mapper	UHGV-1381993_9	1235797.C816_04177	70.9	0.0000000000155	alginic acid biosynthetic process	N/A
COG	UHGV-1381993_9	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_11	phrog_1980	57.4	2.4e-16	tail fiber protein	tail
UniRef90	UHGV-1381993_11	UniRef90_A0A810QCC8	664.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1381993_11	1235797.C816_04179	474.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-1381993_11	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1381993_11	PF07902,NF041249	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_12	phrog_6616	52.5	0.0000000000000035	tail protein	tail
UniRef90	UHGV-1381993_12	UniRef90_A0A2Z4QA17	255.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-1381993_12	1235797.C816_04180	304.0	0	N/A	N/A
structural_annotation	UHGV-1381993_12	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_13	phrog_1194	77.3	1.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1381993_13	1232443.BAIA02000078_gene17	145.0	1.06499e-43	N/A	N/A
structural_annotation	UHGV-1381993_13	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_14	phrog_1535	101.0	2.39622e-43	tail length tape measure protein	tail
UniRef90	UHGV-1381993_14	UniRef90_A0A810PX76	118.0	7e-24	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1381993_14	693746.OBV_18190	274.0	0	domain protein	N/A
COG	UHGV-1381993_14	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381993_14	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_16	phrog_33872	52.0	0.000000000000013	N/A	unknown function
PHROG	UHGV-1381993_17	phrog_706	99.9	2.4e-29	N/A	unknown function
UniRef90	UHGV-1381993_17	UniRef90_UPI001D069FB9	286.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1381993_17	693746.OBV_18170	190.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1381993_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1381993_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_18	phrog_11299	86.0	4.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1381993_18	693746.OBV_18160	197.0	0	N/A	N/A
structural_annotation	UHGV-1381993_18	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_19	phrog_3099	101.4	9.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-1381993_19	1232443.BAIA02000078_gene23	233.0	0	N/A	N/A
structural_annotation	UHGV-1381993_19	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_20	phrog_3266	54.1	0.0000000000000026	tail completion	connector
eggNOG-mapper	UHGV-1381993_20	1232443.BAIA02000078_gene24	218.0	0	N/A	N/A
structural_annotation	UHGV-1381993_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_21	phrog_556	57.6	2.1e-16	minor head protein	head and packaging
UniRef90	UHGV-1381993_21	UniRef90_A0A2U1BEM0	220.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1381993_21	1226322.HMPREF1545_00054	176.0	0	Minor capsid protein	N/A
Pfam	UHGV-1381993_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1381993_21	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_22	phrog_3366	91.6	7.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1381993_22	1226322.HMPREF1545_00053	194.0	0	N/A	N/A
structural_annotation	UHGV-1381993_22	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_23	phrog_541	99.0	3.1e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1381993_23	1120998.AUFC01000030_gene2237	53.5	0.000000278	N/A	N/A
PHROG	UHGV-1381993_29	phrog_434	54.3	0.0000000000000023	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1381993_29	1232453.BAIF02000002_gene1275	54.7	0.0000000138	YqaJ viral recombinase family	N/A
COG	UHGV-1381993_29	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-1381993_30	phrog_13890	71.9	5.6e-21	N/A	unknown function
UniRef90	UHGV-1381993_30	UniRef90_A0A1C7FRQ8	67.0	0.000000000000438	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-1381993_30	1507.HMPREF0262_00298	74.3	8.73e-17	N/A	N/A
structural_annotation	UHGV-1381993_30	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_31	phrog_33872	47.9	0.00000000000025	N/A	unknown function
PHROG	UHGV-1381993_32	phrog_13890	76.0	2.6e-22	N/A	unknown function
UniRef90	UHGV-1381993_32	UniRef90_UPI001D06E573	92.0	4.95e-23	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-1381993_32	1519439.JPJG01000054_gene2127	90.5	2.59e-23	N/A	N/A
Pfam	UHGV-1381993_32	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
structural_annotation	UHGV-1381993_32	PF19807,NF010256,COG4453	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_34	phrog_58	149.6	8.40779e-45	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1381993_34	1160721.RBI_II00528	214.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1381993_34	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
UniRef90	UHGV-1381993_35	UniRef90_A0A2Z4QA03	74.3	0.0000000000000362	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1381993_35	1408437.JNJN01000010_gene1237	121.0	3.34e-33	N/A	N/A
structural_annotation	UHGV-1381993_35	PF10666	N/A	N/A	N/A	N/A
KOfam	UHGV-1381993_38	K06909	332.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1381993_38	phrog_3717	148.2	4.06377e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1381993_38	UniRef90_R9JJE2	587.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1381993_38	397291.C804_01612	587.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1381993_38	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1381993_38	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1381993_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1381993_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1381993_38	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381993_39	UniRef90_A0A412AWV1	55.1	0.0000000535	Helix-turn-helix domain-containing protein	N/A
KOfam	UHGV-1381993_40	K03091	65.7	9.9e-19	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-1381993_40	phrog_351	47.4	1.8e-21	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-1381993_40	UniRef90_UPI001957B4F0	293.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1381993_40	742738.HMPREF9460_00723	147.0	1.46001e-41	Sigma-70, region 4	N/A
Pfam	UHGV-1381993_40	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-1381993_40	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-1381993_40	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-1381993_40	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A
PHROG	UHGV-1381993_42	phrog_244	64.6	2.1e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1381993_42	742738.HMPREF9460_00725	149.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1381993_42	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1381993_44	K02316	51.0	2.2e-18	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1381993_44	phrog_1313	217.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381993_44	UniRef90_A0A6N2UJW2	349.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-1381993_44	693746.OBV_01820	317.0	0	Virulence-associated protein E	N/A
PADLOC	UHGV-1381993_44	drt-cluster192	75.6	7.4e-30	DRT	DRT
Pfam	UHGV-1381993_44	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1381993_44	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1381993_44	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1381993_44	PF08706,PF05272,PF19898,MF_00974,MF_00016,NF005477,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_45	phrog_2113	46.5	0.00000000000052	N/A	unknown function
structural_annotation	UHGV-1381993_45	PF08279,COG1654	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1381993_46	646529.Desaci_3040	55.5	0.0000000021	TIGRFAM DNA binding domain, excisionase family	N/A
structural_annotation	UHGV-1381993_46	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1381993_47	K14059	297.2	0	int; integrase	N/A
PHROG	UHGV-1381993_47	phrog_1	225.7	0	integrase	integration and excision
UniRef90	UHGV-1381993_47	UniRef90_UPI001898152E	508.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1381993_47	877411.JMMA01000002_gene2540	372.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1381993_47	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1381993_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1381993_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1381993_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1381993_47	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381993_48	UniRef90_A0A1C5WHV3	56.2	0.00000000386	RHH_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1381993_48	663952.SDD27957_09060	50.8	0.0000000876	N/A	N/A
structural_annotation	UHGV-1381993_48	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_50	phrog_29	147.2	1.30321e-43	major head protein	head and packaging
UniRef90	UHGV-1381993_50	UniRef90_UPI0004AE1FFD	371.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1381993_50	1232443.BAIA02000078_gene29	371.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1381993_50	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1381993_50	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_51	phrog_909	63.3	2.8e-18	major head protein	head and packaging
UniRef90	UHGV-1381993_51	UniRef90_K1TUL5	75.9	0.0000000000000172	N/A	N/A
eggNOG-mapper	UHGV-1381993_51	1497679.EP56_02915	66.6	0.00000000000691	N/A	N/A
structural_annotation	UHGV-1381993_51	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_52	phrog_194	96.6	3.2e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-1381993_52	UniRef90_A0A2Z4Q9Y8	182.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1381993_52	1232443.BAIA02000078_gene31	171.0	0	N/A	N/A
Pfam	UHGV-1381993_52	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1381993_52	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381993_53	PF11607,MF_00436,NF011232,COG1923	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_54	phrog_581	280.2	0	minor head protein	head and packaging
UniRef90	UHGV-1381993_54	UniRef90_A0A1C5N7V1	890.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1381993_54	1226322.HMPREF1545_00046	632.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1381993_54	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1381993_54	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-1381993_54	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381993_54	PF06152,PF15542,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_55	phrog_533	339.1	0	portal protein	head and packaging
UniRef90	UHGV-1381993_55	UniRef90_UPI00189D71DB	665.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1381993_55	1232443.BAIA02000078_gene36	637.0	0	N/A	N/A
structural_annotation	UHGV-1381993_55	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1381993_56	K06909	117.6	1.3e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1381993_56	phrog_10250	168.9	0	N/A	unknown function
UniRef90	UHGV-1381993_56	UniRef90_UPI0018AC3323	559.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1381993_56	476272.RUMHYD_01756	456.0	0	N/A	N/A
Pfam	UHGV-1381993_56	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1381993_56	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1381993_56	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1381993_56	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1381993_56	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381993_57	UniRef90_UPI0018A8F249	246.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1381993_57	1235790.C805_00037	137.0	7.76e-40	N/A	N/A
structural_annotation	UHGV-1381993_57	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-1381993_58	phrog_130	162.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1381993_58	UniRef90_A0A1V0QCE9	348.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1381993_58	411467.BACCAP_02726	189.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1381993_58	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1381993_58	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1381993_58	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1381993	Yes	39,488	49	62	1