vOTU vOTU-154677

vOTU: vOTU-154677

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-154677
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Egerieenecus → Egerieenecus merdigallinarum
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00582 → vOTU-154677
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Egerieenecus → Egerieenecus merdigallinarum
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-2182343
Biosample ID	SAMEA3449330
Genome length (bp)	24,424 bps
CheckV completeness	51.22% (Medium-quality)
CDS count	17
CDS density	93.93%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Egerieenecus → Egerieenecus merdigallinarum	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2182343_1	K06400	304.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2182343_1	phrog_95	337.0	0	integrase	integration and excision
UniRef90	UHGV-2182343_1	UniRef90_A0A3D5KZQ1	369.0	0	Recombinase family protein (Fragment)	N/A
eggNOG-mapper	UHGV-2182343_1	1341157.RF007C_02525	380.0	0	N/A	N/A
Pfam	UHGV-2182343_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2182343_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-2182343_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2182343_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2182343_1	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-2182343_2	K06400	327.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2182343_2	phrog_95	350.5	0	integrase	integration and excision
UniRef90	UHGV-2182343_2	UniRef90_UPI001B260270	395.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-2182343_2	1341157.RF007C_02530	387.0	0	N/A	N/A
Pfam	UHGV-2182343_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2182343_2	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-2182343_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2182343_2	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-2182343_3	K06400	238.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2182343_3	phrog_95	270.5	0	integrase	integration and excision
UniRef90	UHGV-2182343_3	UniRef90_A0A1V5IQ84	296.0	0	Transposon Tn3 resolvase	N/A
eggNOG-mapper	UHGV-2182343_3	158189.SpiBuddy_0296	263.0	0	recombinase activity	N/A
Pfam	UHGV-2182343_3	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2182343_3	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-2182343_3	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
PHROG	UHGV-2182343_4	phrog_2443	45.5	0.00000000000074	amidoligase enzyme	other
UniRef90	UHGV-2182343_4	UniRef90_UPI001F1D6231	67.8	0.00000000081	virulence protein	N/A
eggNOG-mapper	UHGV-2182343_4	1200567.JNKD01000011_gene664	65.1	0.00000000293	Putative amidoligase enzyme	N/A
PHROG	UHGV-2182343_5	phrog_2649	62.8	6.4e-18	endolysin	lysis
UniRef90	UHGV-2182343_5	UniRef90_A0A1Q6PTR5	508.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-2182343_5	871963.Desdi_1346	117.0	8.81e-27	NLP P60 protein	N/A
Pfam	UHGV-2182343_5	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2182343_5	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2182343_5	PF01471,PF19087,NF041850,TIGR02219,COG3409,COG3103,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-2182343_6	phrog_962	76.0	5.3e-22	holin	lysis
UniRef90	UHGV-2182343_6	UniRef90_A0A1W2A7S4	97.1	1.21e-24	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-2182343_6	1145276.T479_19880	77.0	1.66e-17	Bacteriophage holin	N/A
Pfam	UHGV-2182343_6	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-2182343_6	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-2182343_6	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2182343_6	PF04531	N/A	N/A	N/A	N/A
PHROG	UHGV-2182343_7	phrog_4105	84.0	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-2182343_7	610130.Closa_0762	105.0	8.89e-28	N/A	N/A
eggNOG-mapper	UHGV-2182343_8	1123242.JH636434_gene4797	73.9	0.0000000000836	GDSL-like Lipase/Acylhydrolase	N/A
COG	UHGV-2182343_8	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
Pfam	UHGV-2182343_9	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
COG	UHGV-2182343_9	COG3397	N/A	N/A	Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains	N/A
PHROG	UHGV-2182343_10	phrog_372	235.4	0	tail protein	tail
UniRef90	UHGV-2182343_10	UniRef90_UPI001F1AF627	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-2182343_10	1211844.CBLM010000016_gene1479	190.0	0	N/A	N/A
Pfam	UHGV-2182343_10	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-2182343_10	PF05895,MF_04116,NF010681,NF012201,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-2182343_11	phrog_1067	211.0	0	minor head protein	head and packaging
UniRef90	UHGV-2182343_11	UniRef90_A0A1Q6PU45	1138.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-2182343_11	1443125.Z962_05575	173.0	9.80909e-45	Prophage endopeptidase tail	N/A
Pfam	UHGV-2182343_11	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-2182343_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-2182343_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2182343_11	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-2182343_12	K19092	49.4	0.00000000000011	parE1_3_4; toxin ParE1/3/4	N/A
UniRef90	UHGV-2182343_12	UniRef90_UPI00102F98EF	138.0	1.78e-40	type II toxin-antitoxin system RelE/ParE family toxin	N/A
eggNOG-mapper	UHGV-2182343_12	1408423.JHYA01000010_gene1430	119.0	8.62e-34	ParE toxin of type II toxin-antitoxin system, parDE	N/A
Pfam	UHGV-2182343_12	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
structural_annotation	UHGV-2182343_12	PF05016,TIGR00053,COG3668	N/A	N/A	N/A	N/A
UniRef90	UHGV-2182343_13	UniRef90_R7IJU1	147.0	2.10195e-44	Prevent-host-death family protein	N/A
eggNOG-mapper	UHGV-2182343_13	1408423.JHYA01000010_gene1431	141.0	6.99248e-43	Antitoxin component of a toxin-antitoxin (TA) module	N/A
COG	UHGV-2182343_13	COG2161	N/A	N/A	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	N/A
structural_annotation	UHGV-2182343_13	PF02604,TIGR01552,COG2161	N/A	N/A	N/A	N/A
KOfam	UHGV-2182343_14	K07473	67.0	4.4e-19	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-2182343_14	phrog_2737	71.8	5.8e-21	N/A	unknown function
UniRef90	UHGV-2182343_14	UniRef90_A0A1Y3YPF2	123.0	1.41e-34	Toxin-antitoxin system protein	N/A
eggNOG-mapper	UHGV-2182343_14	1408311.JNJM01000012_gene1727	102.0	7.17e-27	RelB antitoxin	N/A
Pfam	UHGV-2182343_14	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-2182343_14	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-2182343_14	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-2182343_14	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
PHROG	UHGV-2182343_15	phrog_33	70.3	4.8e-20	distal tail protein Dit	tail
UniRef90	UHGV-2182343_15	UniRef90_A0A7C6FS63	309.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2182343_15	203119.Cthe_1708	150.0	1.8399e-42	Phage tail protein	N/A
COG	UHGV-2182343_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2182343_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2182343_16	phrog_10079	45.9	8.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-2182343_16	621372.ACIH01000214_gene1012	129.0	2.03e-33	N/A	N/A
KOfam	UHGV-2182343_17	K10421	67.6	3.3e-20	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-2182343_17	phrog_13339	369.4	0	tail length tape measure protein	tail
UniRef90	UHGV-2182343_17	UniRef90_A0A1Q6PTR6	1796.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2182343_17	1476973.JMMB01000007_gene1771	301.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-2182343_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2182343_17	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2182343_17	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2182343_17	PF10145,TIGR01760	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2182343	Yes	24,424	59	51	1