vOTU vOTU-154707

vOTU: vOTU-154707

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-154707
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00161 → vOTU-154707
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1483657
Biosample ID	N/A
Genome length (bp)	36,740 bps
CheckV completeness	87.95% (Medium-quality)
CDS count	72
CDS density	95.04%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	91	Host agreement	93.41
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1483657_2	K22299	41.6	0.000000000026	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1483657_2	UniRef90_A0A1C6J963	107.0	7.05e-29	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1483657_2	1226322.HMPREF1545_00039	70.9	0.00000000000000255	sequence-specific DNA binding	N/A
Pfam	UHGV-1483657_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1483657_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1483657_3	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-1483657_4	K02647	56.3	4.3e-16	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-1483657_4	UniRef90_UPI00164DE10C	60.1	0.000000000139	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1483657_4	1301100.HG529387_gene5110	60.1	0.000000000847	Putative sugar diacid recognition	N/A
Pfam	UHGV-1483657_4	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-1483657_4	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-1483657_4	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_9	phrog_22543	40.8	0.000000000026	N/A	unknown function
PHROG	UHGV-1483657_10	phrog_3136	128.8	1.9e-38	N/A	unknown function
UniRef90	UHGV-1483657_10	UniRef90_A0A3D0HBD2	139.0	2.19e-38	ASCH domain-containing protein	N/A
COG	UHGV-1483657_10	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1483657_10	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_11	phrog_38832	49.0	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1483657_11	665956.HMPREF1032_00143	61.6	0.00000000397	N/A	N/A
structural_annotation	UHGV-1483657_11	PF07073	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_12	phrog_15198	41.7	0.000000000018	N/A	unknown function
UniRef90	UHGV-1483657_12	UniRef90_A0A373NR41	58.2	0.0000000194	N/A	N/A
eggNOG-mapper	UHGV-1483657_12	411470.RUMGNA_00214	68.6	0.0000000000019	N/A	N/A
Pfam	UHGV-1483657_12	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-1483657_13	K17398	87.8	2.2e-35	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-1483657_13	phrog_116	91.4	2e-35	DNA methyltransferase	other
UniRef90	UHGV-1483657_13	UniRef90_UPI001C3E903D	576.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1483657_13	1235797.C816_01614	527.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-1483657_13	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1483657_13	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1483657_13	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1483657_15	K01160	45.1	0.0000000000024	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1483657_15	phrog_4632	70.4	1.9e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483657_15	UniRef90_A0A7X8IB41	122.0	1.87e-33	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1483657_15	469604.HMPREF0946_00819	63.5	0.0000000000285	N/A	N/A
structural_annotation	UHGV-1483657_15	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_17	phrog_2149	67.5	2.2e-19	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483657_17	UniRef90_A0A417QFV0	104.0	1.63e-23	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1483657_17	742740.HMPREF9474_03117	179.0	0	N/A	N/A
structural_annotation	UHGV-1483657_17	PF01978,NF000243,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1483657_18	K03111	153.8	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1483657_18	phrog_44	152.9	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483657_18	UniRef90_A0A1C5QDM6	211.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1483657_18	1226322.HMPREF1545_04080	210.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1483657_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1483657_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1483657_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1483657_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1483657_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_19	phrog_7370	62.7	4.9e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483657_19	UniRef90_UPI001C122365	136.0	1.53e-39	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1483657_19	1227453.C444_10654	52.0	0.000000642	COG1403 Restriction endonuclease	N/A
Pfam	UHGV-1483657_19	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1483657_19	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1483657_20	phrog_72	68.0	1.3e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483657_20	UniRef90_A0A8D9PDS2	163.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1483657_20	445972.ANACOL_01825	146.0	2.42004e-42	N/A	N/A
structural_annotation	UHGV-1483657_20	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1483657_21	UniRef90_B0PAM4	166.0	0	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-1483657_21	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1483657_22	UniRef90_A0A845QLQ8	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483657_22	1238184.CM001792_gene2550	98.2	1.68e-22	N/A	N/A
Pfam	UHGV-1483657_22	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1483657_22	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_23	phrog_4973	47.1	0.00000000000035	N/A	unknown function
UniRef90	UHGV-1483657_23	UniRef90_A0A3D3Y5F2	64.3	0.00000000000548	DNA-binding protein	N/A
Pfam	UHGV-1483657_23	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1483657_23	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483657_25	PF14354,TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1483657_29	UniRef90_A0A3D3Y6C1	66.2	0.000000000000436	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1483657_29	592026.GCWU0000282_001072	47.8	0.00000166	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1483657_29	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1483657_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1483657_29	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_30	phrog_4611	43.0	0.0000000000023	minor head protein	head and packaging
UniRef90	UHGV-1483657_30	UniRef90_UPI001EDCCFB6	117.0	1.63e-26	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1483657_30	411902.CLOBOL_02557	171.0	0	N/A	N/A
structural_annotation	UHGV-1483657_30	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-1483657_31	UniRef90_A0A3D3Y0G5	97.4	4.31e-23	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1483657_31	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483657_32	PF03885	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_35	phrog_301	42.4	0.000000000012	secreted protein	other
eggNOG-mapper	UHGV-1483657_35	1262449.CP6013_2082	170.0	0	N/A	N/A
structural_annotation	UHGV-1483657_35	PF11631,TIGR03066	N/A	N/A	N/A	N/A
Pfam	UHGV-1483657_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1483657_36	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-1483657_36	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1483657_37	K06400	271.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1483657_37	phrog_95	279.8	0	integrase	integration and excision
UniRef90	UHGV-1483657_37	UniRef90_A0A3A9I9T1	353.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1483657_37	357809.Cphy_2997	288.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1483657_37	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1483657_37	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1483657_37	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1483657_37	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1483657_38	1232443.BAIA02000078_gene6	55.5	0.000000021	N/A	N/A
structural_annotation	UHGV-1483657_39	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_40	phrog_20016	174.8	0	N/A	unknown function
UniRef90	UHGV-1483657_40	UniRef90_A0A2Z4QB67	160.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1483657_40	1226322.HMPREF1545_00077	152.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1483657_40	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_41	phrog_16490	134.7	7.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-1483657_41	1408437.JNJN01000043_gene803	135.0	4.07e-36	N/A	N/A
PHROG	UHGV-1483657_42	phrog_22984	88.2	6.5e-26	N/A	unknown function
PHROG	UHGV-1483657_43	phrog_21718	111.4	6.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-1483657_43	397290.C810_05210	81.6	1.76e-17	N/A	N/A
PHROG	UHGV-1483657_44	phrog_3754	110.0	1.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1483657_44	1226322.HMPREF1545_00073	162.0	0	N/A	N/A
structural_annotation	UHGV-1483657_49	PF01402,NF008671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483657_50	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1483657_51	K08640	100.3	3e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1483657_51	phrog_894	99.9	2.9e-29	endolysin	lysis
UniRef90	UHGV-1483657_51	UniRef90_K1TJK4	211.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1483657_51	1235797.C816_04171	192.0	0	Peptidase M15	N/A
Pfam	UHGV-1483657_51	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1483657_51	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483657_51	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_52	phrog_18955	62.9	3.3e-18	N/A	unknown function
UniRef90	UHGV-1483657_52	UniRef90_UPI00164D2830	332.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-1483657_52	696369.KI912183_gene2044	56.2	0.00000192	exopolysaccharide biosynthesis protein	N/A
Pfam	UHGV-1483657_52	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1483657_52	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-1483657_52	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_54	phrog_13256	63.2	2.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1483657_54	1226322.HMPREF1545_00132	68.6	0.0000000000000157	N/A	N/A
PHROG	UHGV-1483657_55	phrog_4105	75.1	8.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1483657_55	411460.RUMTOR_01326	56.6	0.00000000526	N/A	N/A
PHROG	UHGV-1483657_56	phrog_3904	75.6	3.4e-22	tail fiber protein	tail
eggNOG-mapper	UHGV-1483657_56	1226322.HMPREF1545_00064	110.0	4.73e-23	N/A	N/A
PHROG	UHGV-1483657_57	phrog_32744	711.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1483657_57	1120998.AUFC01000030_gene2247	229.0	0	N/A	N/A
structural_annotation	UHGV-1483657_57	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_58	phrog_1194	54.7	0.0000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1483657_58	1226322.HMPREF1545_00060	202.0	0	N/A	N/A
structural_annotation	UHGV-1483657_58	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_59	phrog_1535	87.9	3.9e-35	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1483657_59	693746.OBV_18190	191.0	0	domain protein	N/A
COG	UHGV-1483657_59	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483657_59	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_61	phrog_706	125.5	3.8e-37	N/A	unknown function
UniRef90	UHGV-1483657_61	UniRef90_UPI000682A80B	229.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1483657_61	693746.OBV_18170	220.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1483657_61	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1483657_61	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_62	phrog_11299	88.9	5.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1483657_62	693746.OBV_18160	216.0	0	N/A	N/A
structural_annotation	UHGV-1483657_62	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_63	phrog_3099	98.3	8.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-1483657_63	1226322.HMPREF1545_00056	243.0	0	N/A	N/A
structural_annotation	UHGV-1483657_63	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_64	phrog_3266	49.7	0.000000000000048	tail completion	connector
eggNOG-mapper	UHGV-1483657_64	1232443.BAIA02000078_gene24	142.0	2.65e-41	N/A	N/A
structural_annotation	UHGV-1483657_64	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_65	phrog_556	69.7	3.4e-20	minor head protein	head and packaging
UniRef90	UHGV-1483657_65	UniRef90_UPI00195E1497	171.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1483657_65	1226322.HMPREF1545_00054	132.0	1e-37	Minor capsid protein	N/A
Pfam	UHGV-1483657_65	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1483657_65	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_66	phrog_3366	90.3	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1483657_66	1226322.HMPREF1545_00053	150.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-1483657_66	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_67	phrog_541	104.9	4.8e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1483657_67	642492.Clole_0822	66.2	0.00000000000574	N/A	N/A
PHROG	UHGV-1483657_68	phrog_10	166.7	0	major head protein	head and packaging
UniRef90	UHGV-1483657_68	UniRef90_A0A2U1BEF2	533.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1483657_68	1226322.HMPREF1545_00050	474.0	0	Phage capsid family	N/A
Pfam	UHGV-1483657_68	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1483657_68	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1483657_68	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1483657_68	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1483657_69	1232443.BAIA02000078_gene31	86.3	5.77e-19	N/A	N/A
structural_annotation	UHGV-1483657_69	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483657_70	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-1483657_72	phrog_581	219.4	0	minor head protein	head and packaging
UniRef90	UHGV-1483657_72	UniRef90_UPI001D080D49	371.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1483657_72	1226322.HMPREF1545_00046	276.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1483657_72	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1483657_72	COG2369	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1483657	Yes	36,740	52	88	1