vOTU vOTU-155029

vOTU: vOTU-155029

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-155029
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-03586 → vGENUS-05420 → vOTU-155029
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1866103
Biosample ID	N/A
Genome length (bp)	37,613 bps
CheckV completeness	61.15% (Medium-quality)
CDS count	56
CDS density	92.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	74	Host agreement	85.14
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1866103_1	K22299	41.2	0.000000000034	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1866103_1	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1866103_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1866103_6	phrog_6568	75.5	4.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1866103_6	428125.CLOLEP_01394	80.5	2.35e-19	N/A	N/A
eggNOG-mapper	UHGV-1866103_10	411473.RUMCAL_02525	127.0	1.17e-36	N/A	N/A
PHROG	UHGV-1866103_12	phrog_2245	57.9	1.9e-16	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1866103_12	478749.BRYFOR_08545	61.6	0.000000000113	N/A	N/A
structural_annotation	UHGV-1866103_12	PF12643,MF_01020,NF001610,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_14	phrog_3270	93.2	2.5e-27	head maturation protease	head and packaging
UniRef90	UHGV-1866103_14	UniRef90_A0A7V9ZLY0	75.5	0.00000000000000571	Phage major capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-1866103_14	742740.HMPREF9474_02269	104.0	2.8e-24	Caudovirus prohead serine protease	N/A
structural_annotation	UHGV-1866103_16	PF08410,MF_00360,NF010078,COG3830	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_23	phrog_6721	281.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1866103_23	478749.BRYFOR_08540	281.0	0	N/A	N/A
structural_annotation	UHGV-1866103_23	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_26	phrog_24386	239.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1866103_26	478749.BRYFOR_08546	226.0	0	UMP catabolic process	N/A
COG	UHGV-1866103_26	COG0647	N/A	N/A	Ribonucleotide monophosphatase NagD, HAD superfamily	N/A
PHROG	UHGV-1866103_27	phrog_19852	59.7	3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1866103_27	742740.HMPREF9474_02297	58.9	0.000000000064	N/A	N/A
PHROG	UHGV-1866103_29	phrog_62	136.7	1.7e-40	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866103_29	UniRef90_A0A4D7AM36	526.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-1866103_29	665956.HMPREF1032_00650	500.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-1866103_29	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1866103_29	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_30	phrog_4787	178.4	0	single strand annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866103_30	UniRef90_D4P7I8	133.0	1.97e-36	Gp077	N/A
eggNOG-mapper	UHGV-1866103_30	742733.HMPREF9469_05065	162.0	0	N/A	N/A
structural_annotation	UHGV-1866103_30	PF21265,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-1866103_31	K02319	41.2	0.00000000000059	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-1866103_31	phrog_4210	1881.2	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866103_31	UniRef90_UPI001D06573B	1684.0	0	N/A	N/A
eggNOG-mapper	UHGV-1866103_31	428125.CLOLEP_01375	1677.0	0	DNA polymerase type-B family	N/A
Pfam	UHGV-1866103_31	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1866103_31	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
structural_annotation	UHGV-1866103_31	PF00136,PF05272,PF10991,PF09250,MF_04100,MF_00016,NF011296,TIGR00592,COG3378,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_33	phrog_4678	175.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1866103_33	428125.CLOLEP_01372	157.0	0	N/A	N/A
PHROG	UHGV-1866103_34	phrog_4695	98.1	1.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1866103_34	411460.RUMTOR_02032	60.8	0.0000000138	N/A	N/A
PHROG	UHGV-1866103_35	phrog_2152	216.2	0	N/A	unknown function
UniRef90	UHGV-1866103_35	UniRef90_UPI0019578B0D	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-1866103_35	411460.RUMTOR_02029	184.0	0	N/A	N/A
Pfam	UHGV-1866103_35	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1866103_35	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_36	phrog_4079	186.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1866103_36	742740.HMPREF9474_02312	150.0	5.395e-43	N/A	N/A
PHROG	UHGV-1866103_39	phrog_2152	210.6	0	N/A	unknown function
UniRef90	UHGV-1866103_39	UniRef90_UPI0018AB827B	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1866103_39	742733.HMPREF9469_05079	203.0	0	N/A	N/A
Pfam	UHGV-1866103_39	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1866103_39	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_45	phrog_1129	76.6	2.2e-22	holin	lysis
UniRef90	UHGV-1866103_45	UniRef90_A0A414P831	135.0	1.65e-39	Holin	N/A
eggNOG-mapper	UHGV-1866103_45	478749.BRYFOR_08506	134.0	5.09001e-40	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1866103_45	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1866103_45	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1866103_46	K01447	56.5	6.3e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1866103_46	phrog_20388	296.7	0	endolysin	lysis
UniRef90	UHGV-1866103_46	UniRef90_A0A374N1L8	342.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1866103_46	1203606.HMPREF1526_00253	311.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1866103_46	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1866103_46	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
Pfam	UHGV-1866103_46	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1866103_46	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1866103_46	PF01510,PF19087,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
UniRef90	UHGV-1866103_49	UniRef90_UPI00191792C2	86.7	2.02e-16	leucine-rich repeat domain-containing protein	N/A
Pfam	UHGV-1866103_49	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-1866103_49	PF03382,NF041351,COG4886	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_50	phrog_19695	64.4	2.7e-18	N/A	unknown function
PHROG	UHGV-1866103_51	phrog_1863	73.9	1.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1866103_51	552398.HMPREF0866_01158	74.3	1.21e-16	N/A	N/A
PHROG	UHGV-1866103_54	phrog_1067	141.8	1.90016e-42	minor head protein	head and packaging
eggNOG-mapper	UHGV-1866103_54	1027396.LMOSA_21510	71.6	0.000000000247	Prophage endopeptidase tail	N/A
Pfam	UHGV-1866103_54	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
NCBIFam	UHGV-1866103_54	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1866103_54	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1866103_55	phrog_33	62.6	1.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-1866103_55	UniRef90_A0A173Z1X4	164.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1866103_55	1444306.JFZC01000034_gene2623	78.2	0.0000000000000263	tail component	N/A
Pfam	UHGV-1866103_55	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1866103_55	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1866103_55	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1866103_55	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1866103_56	phrog_4372	797.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1866103_56	UniRef90_D4MRU8	785.0	0	Tape measure domain	N/A
eggNOG-mapper	UHGV-1866103_56	742733.HMPREF9469_05020	759.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1866103_56	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1866103_56	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1866103_56	COG5412	N/A	N/A	Phage-related protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1866103	Yes	37,613	34	61	1